| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is erpA1 [H]
Identifier: 238026238
GI number: 238026238
Start: 600331
End: 600705
Strand: Direct
Name: erpA1 [H]
Synonym: bglu_1g05710
Alternate gene names: 238026238
Gene position: 600331-600705 (Clockwise)
Preceding gene: 238026237
Following gene: 238026240
Centisome position: 15.37
GC content: 60.53
Gene sequence:
>375_bases ATGAACGCTGTCACCGAATCCGCGGCAACCACCCCCACCGAAATGCCGGCGCCGTTCGTCTTTACCGACGCCGCCGCCGA CAAGGTCAAGCAATTGATCGAGGAAGAGGGCAATCCCGAGCTGAAGCTGCGCGTATTCGTGCAGGGCGGCGGCTGCTCGG GCTTCCAGTACGGCTTCACGTTCGACGAGGAAGTCAACGAGGACGACACCGTGATGAACAAGAGCGGCGTCCAGTTGCTG ATCGACTCGATGAGCTACCAGTATCTGGTGGGTGCCGAGATCGACTACAAGGACGATCTGAACGGCGCCCAATTCGTGAT CAAGAACCCGAACGCGACCACCACCTGCGGCTGCGGCTCGTCGTTCTCGGTCTGA
Upstream 100 bases:
>100_bases CCGGCCGTAATCAGGGCGCAAACCGCTTGATTTCGCGGACTTCGGCACGATCTCCGGAACCGCCCTACAATAGCGGCAAT GGCTTTTTTGGAGAGTTCGC
Downstream 100 bases:
>100_bases CCGGCCGCCACTGACGCAGCGCGCGGGCCAGCGTCGCCCGCGATCCCGAAACCCCACGCCTTGCGTGGGGTTTTTGTCGT GGTGCGCATGATTCCCTGCC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNAVTESAATTPTEMPAPFVFTDAAADKVKQLIEEEGNPELKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKSGVQLL IDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSFSV
Sequences:
>Translated_124_residues MNAVTESAATTPTEMPAPFVFTDAAADKVKQLIEEEGNPELKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKSGVQLL IDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSFSV >Mature_124_residues MNAVTESAATTPTEMPAPFVFTDAAADKVKQLIEEEGNPELKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKSGVQLL IDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=124, Percent_Identity=37.9032258064516, Blast_Score=89, Evalue=6e-19, Organism=Homo sapiens, GI52426768, Length=114, Percent_Identity=34.2105263157895, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=61.2612612612613, Blast_Score=153, Evalue=3e-39, Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=37.1428571428571, Blast_Score=68, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71998452, Length=123, Percent_Identity=37.3983739837398, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193209025, Length=112, Percent_Identity=30.3571428571429, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25146411, Length=116, Percent_Identity=29.3103448275862, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=97, Percent_Identity=41.2371134020619, Blast_Score=80, Evalue=1e-16, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=48.1927710843374, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI24642263, Length=114, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13369; Mature: 13369
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVTESAATTPTEMPAPFVFTDAAADKVKQLIEEEGNPELKLRVFVQGGGCSGFQYGFT CCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEE FDEEVNEDDTVMNKSGVQLLIDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGS ECCCCCCCCCEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCC SFSV CCCC >Mature Secondary Structure MNAVTESAATTPTEMPAPFVFTDAAADKVKQLIEEEGNPELKLRVFVQGGGCSGFQYGFT CCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEE FDEEVNEDDTVMNKSGVQLLIDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGS ECCCCCCCCCEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCC SFSV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA