| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pgpA [H]
Identifier: 238026196
GI number: 238026196
Start: 554898
End: 555530
Strand: Reverse
Name: pgpA [H]
Synonym: bglu_1g05270
Alternate gene names: 238026196
Gene position: 555530-554898 (Counterclockwise)
Preceding gene: 238026197
Following gene: 238026195
Centisome position: 14.22
GC content: 73.46
Gene sequence:
>633_bases ATGGCGACCAGTGACGATCCGGCGCCGCGCGCCGACGCCCCCCGCCCCGGCACGGCCCTCGCGACGGTGCACGGCCAAGG CCGTGCCTCGCCCCGCGCCGGCCGTCCCGAGGCGGCCGCCGGCGACGTGCAGCCGCCGCCGCGCCGCGCAAGTGCGCCGT TCATGCGCTCGCACCCGCTGCACCTGCTCTCGCTCGGCTTCGGCACCGGCCTCGCGCCGCTCGCGCCGGGCCTGGTCGGC TCGCTGTTCGGCTGGCTGAGCTTCGCCGCGTTCGCGCCGCGCCTGTCGCCGGCCGCCACGCTCGCGCTGATCGCGCTCGG CCTCGTGCTCGGCGTGATCGCCACCGGCCGCACGGCGCGCGCGCTCGGCGGCGGCCGGCCGCGCGCGATCGTCTGGGACC ACGTGGTGGCGATCTGGCTCGTGATGCTGCTGGTCACGCCGGCCACGTTCTCGCAGCAACTGGCGGCGTTCGTGCTGTTT CGCCTCTTCGACGGCGGCAAACTGCCTCCCGTGCGCCATATCGATCGCCGTTTGAAAGCTGGCTTTGGCATCATGCTCGA CGATCTCGTCGCCGCATTCCTGACGCTGCTCGTTATCGCGACGTGGCGTGCCCTGTTTTCCCCTCTTCGATGA
Upstream 100 bases:
>100_bases ATCCGCGCGCTTGCCGCGCCCGAGGAGGCGCCCGGCATCCGCTGGCTCGACGGCGCCGGCACGCCGCTCGCACTGACGCT GCGCGGCTTCGATCACTTCC
Downstream 100 bases:
>100_bases GTCCGCCCGCATGCCGACCGATTCCGTCGTCCACCAGCTCGCGATCCGCGCCGGCAACAAGCTGCGCGACGAACACCTGG CGCTCGCGACCGCCGAATCC
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MATSDDPAPRADAPRPGTALATVHGQGRASPRAGRPEAAAGDVQPPPRRASAPFMRSHPLHLLSLGFGTGLAPLAPGLVG SLFGWLSFAAFAPRLSPAATLALIALGLVLGVIATGRTARALGGGRPRAIVWDHVVAIWLVMLLVTPATFSQQLAAFVLF RLFDGGKLPPVRHIDRRLKAGFGIMLDDLVAAFLTLLVIATWRALFSPLR
Sequences:
>Translated_210_residues MATSDDPAPRADAPRPGTALATVHGQGRASPRAGRPEAAAGDVQPPPRRASAPFMRSHPLHLLSLGFGTGLAPLAPGLVG SLFGWLSFAAFAPRLSPAATLALIALGLVLGVIATGRTARALGGGRPRAIVWDHVVAIWLVMLLVTPATFSQQLAAFVLF RLFDGGKLPPVRHIDRRLKAGFGIMLDDLVAAFLTLLVIATWRALFSPLR >Mature_209_residues ATSDDPAPRADAPRPGTALATVHGQGRASPRAGRPEAAAGDVQPPPRRASAPFMRSHPLHLLSLGFGTGLAPLAPGLVGS LFGWLSFAAFAPRLSPAATLALIALGLVLGVIATGRTARALGGGRPRAIVWDHVVAIWLVMLLVTPATFSQQLAAFVLFR LFDGGKLPPVRHIDRRLKAGFGIMLDDLVAAFLTLLVIATWRALFSPLR
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=146, Percent_Identity=34.2465753424658, Blast_Score=94, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 22053; Mature: 21922
Theoretical pI: Translated: 12.37; Mature: 12.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSDDPAPRADAPRPGTALATVHGQGRASPRAGRPEAAAGDVQPPPRRASAPFMRSHPL CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCH HLLSLGFGTGLAPLAPGLVGSLFGWLSFAAFAPRLSPAATLALIALGLVLGVIATGRTAR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHH ALGGGRPRAIVWDHVVAIWLVMLLVTPATFSQQLAAFVLFRLFDGGKLPPVRHIDRRLKA HHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GFGIMLDDLVAAFLTLLVIATWRALFSPLR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATSDDPAPRADAPRPGTALATVHGQGRASPRAGRPEAAAGDVQPPPRRASAPFMRSHPL CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCH HLLSLGFGTGLAPLAPGLVGSLFGWLSFAAFAPRLSPAATLALIALGLVLGVIATGRTAR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHH ALGGGRPRAIVWDHVVAIWLVMLLVTPATFSQQLAAFVLFRLFDGGKLPPVRHIDRRLKA HHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GFGIMLDDLVAAFLTLLVIATWRALFSPLR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]