BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession	NC_012724
Length	3,906,507

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The map label for this gene is fabG [H]

Identifier: 238026192

GI number: 238026192

Start: 551491

End: 552279

Strand: Direct

Name: fabG [H]

Synonym: bglu_1g05230

Alternate gene names: 238026192

Gene position: 551491-552279 (Clockwise)

Preceding gene: 238026191

Following gene: 238026193

Centisome position: 14.12

GC content: 71.99

Gene sequence:

>789_bases
ATGAACCAAGCAATGGCGGCCGACGCGGCGCGCGGCGCGCGCTACCCGAGCCTGACCGATCGCGCCGTGCTGATCACGGG
CGGCGCCACCGGCATCGGCGCGGCGTTCGTGGCGCATTTCGCGGCACAGGGCGCGCGGGTCGGCTTCGTCGATCTCGACG
CCGAGGCCGGCGCCGCGCTGGTCGAGACGCTGGCCGACGCGCGCCACGCGCCGGTCTTCGCCGCGGCCGACATCACCGAC
ATCGACGCGCTGCGCCGCGCGATCGAGGCGTTGCGCGCGAATACCGGCCCGATCACGGTGCTCGTCAACAACGCGGCGAA
CGACAGGCGCCACCGCATCGAGGACGTCACGCCAGAATCGTTCGACGCGGCGATCGCGGTCAACCTGCGTCACCAGTTCT
TCGCCGCGCAGGCCGTGGCCGACGACATGAAGGCGGCGGGCAGCGGCGCGATCATCAACCTCGGCTCGATCGGCTGGATG
CTGAAGAACGGCGGCTACCCCGTCTACGCGACCTCGAAGGCCGCGGTCCAGGGGCTCACGCGCGCGCTCGCGCGCGATCT
CGGGCCGTTCGGGATACGCGTCAACACGCTGGTGCCGGGCTGGGTGATGACCGACAAGCAGCGCCGGCTGTGGCTCGACG
ATGCGGGGCGCGCGGCGATCAAGGCCGGCCAGTGCCTCGAGGCCGAGCTGCTGCCCGACGACCTGGCGCGCGCCGCGCTG
TTCCTCGCCTCCGACGACAGCCGTATGATGACGGCGCAGGACGTCGTCGTCGACGGCGGATGGGCTTGA

Upstream 100 bases:

>100_bases
ACCAGTACCTGGTGCGCGGCGCGATCCTGCTCGCCGCGGTGCTGCTCGATCAGTTGAAGAACCGCGGCGCGCGCGACTGA
CGCGCCGGGAGGAACCCCAG

Downstream 100 bases:

>100_bases
TCCGGCGTCACCGGCAGCGGTGACGGCCGCCCCTGCGGCGGTGCCGCAGACAGGAGCGACGACCATGACCACCTCGACCC
CCGGCAATGCGGCCTCTGCG

Product: putative dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNQAMAADAARGARYPSLTDRAVLITGGATGIGAAFVAHFAAQGARVGFVDLDAEAGAALVETLADARHAPVFAAADITD
IDALRRAIEALRANTGPITVLVNNAANDRRHRIEDVTPESFDAAIAVNLRHQFFAAQAVADDMKAAGSGAIINLGSIGWM
LKNGGYPVYATSKAAVQGLTRALARDLGPFGIRVNTLVPGWVMTDKQRRLWLDDAGRAAIKAGQCLEAELLPDDLARAAL
FLASDDSRMMTAQDVVVDGGWA

Sequences:

>Translated_262_residues
MNQAMAADAARGARYPSLTDRAVLITGGATGIGAAFVAHFAAQGARVGFVDLDAEAGAALVETLADARHAPVFAAADITD
IDALRRAIEALRANTGPITVLVNNAANDRRHRIEDVTPESFDAAIAVNLRHQFFAAQAVADDMKAAGSGAIINLGSIGWM
LKNGGYPVYATSKAAVQGLTRALARDLGPFGIRVNTLVPGWVMTDKQRRLWLDDAGRAAIKAGQCLEAELLPDDLARAAL
FLASDDSRMMTAQDVVVDGGWA
>Mature_262_residues
MNQAMAADAARGARYPSLTDRAVLITGGATGIGAAFVAHFAAQGARVGFVDLDAEAGAALVETLADARHAPVFAAADITD
IDALRRAIEALRANTGPITVLVNNAANDRRHRIEDVTPESFDAAIAVNLRHQFFAAQAVADDMKAAGSGAIINLGSIGWM
LKNGGYPVYATSKAAVQGLTRALARDLGPFGIRVNTLVPGWVMTDKQRRLWLDDAGRAAIKAGQCLEAELLPDDLARAAL
FLASDDSRMMTAQDVVVDGGWA

Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=33.7349397590361, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=30.6451612903226, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI7705925, Length=257, Percent_Identity=35.408560311284, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=28.5123966942149, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=26.2948207171315, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI4758504, Length=205, Percent_Identity=31.219512195122, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI31542939, Length=192, Percent_Identity=30.7291666666667, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI59889578, Length=233, Percent_Identity=29.6137339055794, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI66933014, Length=232, Percent_Identity=30.1724137931034, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI19923817, Length=268, Percent_Identity=26.4925373134328, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4503817, Length=182, Percent_Identity=24.7252747252747, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI83715985, Length=193, Percent_Identity=29.5336787564767, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI126723191, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=28.8235294117647, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=33.1967213114754, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=32.5490196078431, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.8387096774194, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=29.9212598425197, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=29.4820717131474, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=30.5220883534137, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=30.241935483871, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=27.8688524590164, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=26.8774703557312, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=28.0769230769231, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=32.1138211382114, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=31.5789473684211, Blast_Score=103, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=32.4110671936759, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17567345, Length=190, Percent_Identity=30, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=28.1632653061224, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=29.1497975708502, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=28.996282527881, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=270, Percent_Identity=29.6296296296296, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=28.5171102661597, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=28.4090909090909, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=27.0161290322581, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=29.5880149812734, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=273, Percent_Identity=28.9377289377289, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=275, Percent_Identity=27.6363636363636, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=27.5092936802974, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=29.0441176470588, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=26.2295081967213, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=269, Percent_Identity=28.996282527881, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=28.7878787878788, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=26.8382352941176, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=26.7175572519084, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=27.5735294117647, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=25.4681647940075, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=193, Percent_Identity=29.5336787564767, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=27.3408239700375, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=24.8979591836735, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=28.030303030303, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=27.3684210526316, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=32.4, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=31.3253012048193, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=30.078125, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=30.9236947791165, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=29.7959183673469, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=30.0813008130081, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI281364892, Length=182, Percent_Identity=31.8681318681319, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644337, Length=250, Percent_Identity=30, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI17737361, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355319, Length=258, Percent_Identity=25.1937984496124, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584752, Length=216, Percent_Identity=30.0925925925926, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356301, Length=193, Percent_Identity=26.4248704663212, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27465; Mature: 27465

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQAMAADAARGARYPSLTDRAVLITGGATGIGAAFVAHFAAQGARVGFVDLDAEAGAAL
CCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
VETLADARHAPVFAAADITDIDALRRAIEALRANTGPITVLVNNAANDRRHRIEDVTPES
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCC
FDAAIAVNLRHQFFAAQAVADDMKAAGSGAIINLGSIGWMLKNGGYPVYATSKAAVQGLT
CCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCEEEEECCHHHHHHHH
RALARDLGPFGIRVNTLVPGWVMTDKQRRLWLDDAGRAAIKAGQCLEAELLPDDLARAAL
HHHHHCCCCCCEEEEEECCCEEEECCCCEEEECCCCCHHHHCCCCEECCCCHHHHHHHEE
FLASDDSRMMTAQDVVVDGGWA
EEECCCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MNQAMAADAARGARYPSLTDRAVLITGGATGIGAAFVAHFAAQGARVGFVDLDAEAGAAL
CCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
VETLADARHAPVFAAADITDIDALRRAIEALRANTGPITVLVNNAANDRRHRIEDVTPES
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCC
FDAAIAVNLRHQFFAAQAVADDMKAAGSGAIINLGSIGWMLKNGGYPVYATSKAAVQGLT
CCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCEEEEECCHHHHHHHH
RALARDLGPFGIRVNTLVPGWVMTDKQRRLWLDDAGRAAIKAGQCLEAELLPDDLARAAL
HHHHHCCCCCCEEEEEECCCEEEECCCCEEEECCCCCHHHHCCCCEECCCCHHHHHHHEE
FLASDDSRMMTAQDVVVDGGWA
EEECCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]