| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is prmA [H]
Identifier: 238026174
GI number: 238026174
Start: 532928
End: 533830
Strand: Reverse
Name: prmA [H]
Synonym: bglu_1g05050
Alternate gene names: 238026174
Gene position: 533830-532928 (Counterclockwise)
Preceding gene: 238026175
Following gene: 238026173
Centisome position: 13.67
GC content: 69.77
Gene sequence:
>903_bases ATGAGCTATCGGGAACTCGTCGCCGAGCTGGCGCGCGAACATGCGGAAGCGCTGTCCGACGCGCTGATCGAACTCGGCGC GCTGTCCGTGTCGGTGGAGGACGCCGACGCGGACACGCCCGACGAGCAACCGCTGTTCGGCGAACCGGGCCTCACGCCCG AGCGCACCGCTTGGCAGCACTCGCGCGTGATCGCGCTGCTGGCCGACACGCACGACCCGGCCGTGCTGCTGGCGGCCGCC GCCAACGAGGCAGGGCTCGGCGCCGTGCCCTCCTTCACGCTGCGCGAGGTCGAGGAGCAGGACTGGGTGCGCGTCACCCA ATCGCAGTTCGATCCGATCCCGATCGGCCAGCGGATCTGGGTGGTGCCGTCATGGCACGACGCACCCGAGCCCGACGCGC TCGTGCTCGAGCTCGACCCGGGCCTGGCGTTCGGCACCGGCAGCCACCCCACCACGCGGCTCTGCATGGAATGGCTCGAG CAGACCGTCGAGGCAGGCCAGTCGGTGCTCGACTACGGCTGCGGCTCGGGCATCCTGGCGATCCTCGCGAAGAAGTGCGG CGCGGGCCGCGTGATCGGCATCGACATCGATCCGCAGGCGGTCGAATCGGCCCGCCACAACAGCGAGCGCAATCGCGCCG AGGTCGACTACGGCCTGCCCGACGATTGCCCACCGGGCGAATTCGACATCGTGGTGGCCAACATCCTCTCGAACCCGCTC AAGCTGATGGCCTCGATGCTCGCGTCGAAGGTGCGCCCGGGCGGGCGGATCGCGCTGTCGGGCGTGCTCGCGCGGCAGGC GGACGAGGTCGCGGGCGTCTATGCACGCTACATCGACATGTCGGTCTGGCGCGAACACGAAGGCTGGGTCTGTCTGGCCG GAACACGACGCGAAAGCCATTAG
Upstream 100 bases:
>100_bases TGATGCTCGATTCGAAGTTCGTCGAGGGCGGCACCAGCATCCATTACCTCGAAGGCCGGCTCGCCGCGAAGCAGCAGGTC GCGCCGGAAGAGGCCTGAGC
Downstream 100 bases:
>100_bases AATAGGGGCTGTCCACCACTCCGGCCCCCGTGCTGACCGGCCATCATGCCCCTCGCGACGCGCTGCCCTCACTGTGAAAC CGTCTTCCGGATCAGCCCCG
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSYRELVAELAREHAEALSDALIELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWQHSRVIALLADTHDPAVLLAAA ANEAGLGAVPSFTLREVEEQDWVRVTQSQFDPIPIGQRIWVVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLE QTVEAGQSVLDYGCGSGILAILAKKCGAGRVIGIDIDPQAVESARHNSERNRAEVDYGLPDDCPPGEFDIVVANILSNPL KLMASMLASKVRPGGRIALSGVLARQADEVAGVYARYIDMSVWREHEGWVCLAGTRRESH
Sequences:
>Translated_300_residues MSYRELVAELAREHAEALSDALIELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWQHSRVIALLADTHDPAVLLAAA ANEAGLGAVPSFTLREVEEQDWVRVTQSQFDPIPIGQRIWVVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLE QTVEAGQSVLDYGCGSGILAILAKKCGAGRVIGIDIDPQAVESARHNSERNRAEVDYGLPDDCPPGEFDIVVANILSNPL KLMASMLASKVRPGGRIALSGVLARQADEVAGVYARYIDMSVWREHEGWVCLAGTRRESH >Mature_299_residues SYRELVAELAREHAEALSDALIELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWQHSRVIALLADTHDPAVLLAAAA NEAGLGAVPSFTLREVEEQDWVRVTQSQFDPIPIGQRIWVVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQ TVEAGQSVLDYGCGSGILAILAKKCGAGRVIGIDIDPQAVESARHNSERNRAEVDYGLPDDCPPGEFDIVVANILSNPLK LMASMLASKVRPGGRIALSGVLARQADEVAGVYARYIDMSVWREHEGWVCLAGTRRESH
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=300, Percent_Identity=41.6666666666667, Blast_Score=194, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 32430; Mature: 32299
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRELVAELAREHAEALSDALIELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWQH CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH SRVIALLADTHDPAVLLAAAANEAGLGAVPSFTLREVEEQDWVRVTQSQFDPIPIGQRIW CEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE VVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQTVEAGQSVLDYGCGSGILA EEECCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ILAKKCGAGRVIGIDIDPQAVESARHNSERNRAEVDYGLPDDCPPGEFDIVVANILSNPL HHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHEEHHHHHCCHH KLMASMLASKVRPGGRIALSGVLARQADEVAGVYARYIDMSVWREHEGWVCLAGTRRESH HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure SYRELVAELAREHAEALSDALIELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWQH CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH SRVIALLADTHDPAVLLAAAANEAGLGAVPSFTLREVEEQDWVRVTQSQFDPIPIGQRIW CEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE VVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQTVEAGQSVLDYGCGSGILA EEECCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ILAKKCGAGRVIGIDIDPQAVESARHNSERNRAEVDYGLPDDCPPGEFDIVVANILSNPL HHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHEEHHHHHCCHH KLMASMLASKVRPGGRIALSGVLARQADEVAGVYARYIDMSVWREHEGWVCLAGTRRESH HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA