Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026138

Identifier: 238026138

GI number: 238026138

Start: 495313

End: 495819

Strand: Direct

Name: 238026138

Synonym: bglu_1g04680

Alternate gene names: NA

Gene position: 495313-495819 (Clockwise)

Preceding gene: 238026137

Following gene: 238026139

Centisome position: 12.68

GC content: 67.06

Gene sequence:

>507_bases
ATGATTCAAGCAGGCGATACGCTGCCCGACGCACAAGTCTTCGAGTTCGTCGACGAAGCGCGCGAGGGTTGTACGCTCGG
GCCGAATGCGCTCGGCGTGCGCGAACAGACGGCGGGCAAACGCGTGGTGATCTTCGGATTGCCCGGCGCGTTCACGCCCA
CCTGTTCGGCCAGGCACGTGCCCGGCTACGTCGAACTGGCCGAGCCGCTGCGCGCGGCCGGCGTCGACGAGGTCTGGTGC
GTGTCCGTCAACGACGCGTTCGTGATGGGCGCCTGGGGACGGGATCTGCACACCGCGGGCAAGGTGCGCATGATCGCGGA
CGGCAGCGCTGCATTGACTCAGGCATTGGGGCTTACGCAGGATTTGTCCGCGCGCGGCATGGGGATCCGTTCCCAGCGCT
ACGCGATGGTGGTCGACGACGGCGTGGTCAAGACGCTGGCAGTCGAGGCACCGGGCAAGTTCGAAGTCAGCGACGCGGCA
AGCATCCTGGCAGCGCTCACGCGCTGA

Upstream 100 bases:

>100_bases
GCGCCGGGCCGGGCAAGCTGCCCTCTTCGCTTCGGCGCAGCGGGACGGGTCGTGTTTTCCGTTGCGAAACCCGCAACCGC
ATCGCAATGAAGGACCAGGC

Downstream 100 bases:

>100_bases
GTGGGCCGCCGTGGCCGTTGCGTTGACGCAACGCGTCATGGTGAGACAAGGTGCCGCTATATGGGCCGGCATCCGGAAAC
GCCTCCGTTCCGGACGTCGG

Product: AhpC/TSA family protein

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHVPGYVELAEPLRAAGVDEVWC
VSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQDLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAA
SILAALTR

Sequences:

>Translated_168_residues
MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHVPGYVELAEPLRAAGVDEVWC
VSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQDLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAA
SILAALTR
>Mature_168_residues
MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHVPGYVELAEPLRAAGVDEVWC
VSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQDLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAA
SILAALTR

Specific function: Unknown

COG id: COG0678

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI6912238, Length=168, Percent_Identity=44.047619047619, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6323138, Length=155, Percent_Identity=34.1935483870968, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=47.7124183006536, Blast_Score=140, Evalue=5e-34,
Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=47.7124183006536, Blast_Score=140, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17633; Mature: 17633

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PGYVELAEPLRAAGVDEVWCVSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQ
CCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHCCCC
DLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAASILAALTR
CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PGYVELAEPLRAAGVDEVWCVSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQ
CCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHCCCC
DLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAASILAALTR
CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]