| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is paaG [H]
Identifier: 238026118
GI number: 238026118
Start: 465275
End: 466066
Strand: Reverse
Name: paaG [H]
Synonym: bglu_1g04480
Alternate gene names: 238026118
Gene position: 466066-465275 (Counterclockwise)
Preceding gene: 238026119
Following gene: 238026117
Centisome position: 11.93
GC content: 71.72
Gene sequence:
>792_bases ATGTCGCACGATACGATCCGCTTCGAGCTCGACCCGCAGACGCGGGTCGCAACGATCACGCTGAACCGTCCCGACAAGCT CAACAGCTTCACCCGCGCGATGCACGCGGCGCTGGCCGCCGCGCTCGACGAGGCGGAGGCGGGCCAAGCGCGCGCGCTGG TGCTGACCGGCGCGGGCCGAGGCTTCTGCGCGGGCCAGGACCTCGCCGATCTCGACTTCACGCCCGGCGCGGCGACCGAT CTCGGCGCCTTGATCGACACGCACTTCAATCCCCTGGTGCGCCGCCTGCAGGGGCTGCCGCTGCCCGTGATCGCCGCCGT CAACGGCATCGCGGCCGGCGCCGGCGCCAACCTCGCGCTCGCCTGCGACCTCGTGCTGGCCGCGAAATCGGCCAACTTCA TCCAGTCGTTCGTGAAGATCGGCCTGGTGCCCGACTCGGGCGGTACCTGGTTCCTGCCGCAGCGCGTCGGCTTCGCGCGC GCGCTCGGACTCGCGCTGACGGGCGAGAAACTAGGTGCCGAACGCGCGGCCGAGTGGGGGCTGATCTGGCGCGCCGTCGA CGACGACGCGCTGGCCGCCAGCGCCGCCGCGCTCGCGGCCGACCTCGCGAAGCAGCCGACCCGCGCGATCGCCGCGATCA AGCAGACCATGCGCGCAGGGCTGACTCAAACGCTCGACCAGCAGCTCGACCTCGAACGCGACCGCCAGCGCGAACTGGGC CAATCGCACGACTACGCGGAAGGGGTGGCCGCCTTCATCGAGAAGCGGGCGCCGCGCTTCGAAGGACGCTGA
Upstream 100 bases:
>100_bases CATCCACGTCGCGCCGCAGGCCGACACCGCCGGCGCCTGAGCCATCCCCGCCGCACCGGCCGGCACGGCGCCGGCCGCGC GTCTCCATGAGGAGATCCCG
Downstream 100 bases:
>100_bases GATGAACGCCCCCCGCGCCCCTGGCTCGGCCGCCGATACCGATAACCAGGCCGACCCCGACGCGCTCGCGCGGGCGGCCG CCGACGCGATGTACGCGGCC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSHDTIRFELDPQTRVATITLNRPDKLNSFTRAMHAALAAALDEAEAGQARALVLTGAGRGFCAGQDLADLDFTPGAATD LGALIDTHFNPLVRRLQGLPLPVIAAVNGIAAGAGANLALACDLVLAAKSANFIQSFVKIGLVPDSGGTWFLPQRVGFAR ALGLALTGEKLGAERAAEWGLIWRAVDDDALAASAAALAADLAKQPTRAIAAIKQTMRAGLTQTLDQQLDLERDRQRELG QSHDYAEGVAAFIEKRAPRFEGR
Sequences:
>Translated_263_residues MSHDTIRFELDPQTRVATITLNRPDKLNSFTRAMHAALAAALDEAEAGQARALVLTGAGRGFCAGQDLADLDFTPGAATD LGALIDTHFNPLVRRLQGLPLPVIAAVNGIAAGAGANLALACDLVLAAKSANFIQSFVKIGLVPDSGGTWFLPQRVGFAR ALGLALTGEKLGAERAAEWGLIWRAVDDDALAASAAALAADLAKQPTRAIAAIKQTMRAGLTQTLDQQLDLERDRQRELG QSHDYAEGVAAFIEKRAPRFEGR >Mature_262_residues SHDTIRFELDPQTRVATITLNRPDKLNSFTRAMHAALAAALDEAEAGQARALVLTGAGRGFCAGQDLADLDFTPGAATDL GALIDTHFNPLVRRLQGLPLPVIAAVNGIAAGAGANLALACDLVLAAKSANFIQSFVKIGLVPDSGGTWFLPQRVGFARA LGLALTGEKLGAERAAEWGLIWRAVDDDALAASAAALAADLAKQPTRAIAAIKQTMRAGLTQTLDQQLDLERDRQRELGQ SHDYAEGVAAFIEKRAPRFEGR
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=250, Percent_Identity=32, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI31542718, Length=247, Percent_Identity=27.5303643724696, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI70995211, Length=266, Percent_Identity=27.8195488721804, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4502327, Length=269, Percent_Identity=28.996282527881, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI45643119, Length=204, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI260275230, Length=204, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI260274832, Length=204, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI213417737, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI157694516, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI20127408, Length=179, Percent_Identity=30.7262569832402, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4757968, Length=242, Percent_Identity=24.3801652892562, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI49355787, Length=242, Percent_Identity=24.3801652892562, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI25453481, Length=240, Percent_Identity=24.1666666666667, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI51538573, Length=240, Percent_Identity=24.1666666666667, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI221136756, Length=238, Percent_Identity=23.9495798319328, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI221136753, Length=238, Percent_Identity=23.9495798319328, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI221307494, Length=238, Percent_Identity=23.9495798319328, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI37594471, Length=228, Percent_Identity=28.5087719298246, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI37594469, Length=228, Percent_Identity=28.5087719298246, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI4757966, Length=234, Percent_Identity=24.3589743589744, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI51538581, Length=234, Percent_Identity=24.3589743589744, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI68989263, Length=156, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787660, Length=250, Percent_Identity=58.4, Blast_Score=258, Evalue=3e-70, Organism=Escherichia coli, GI1787659, Length=252, Percent_Identity=36.5079365079365, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI221142681, Length=262, Percent_Identity=35.1145038167939, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87082183, Length=255, Percent_Identity=28.2352941176471, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1788597, Length=274, Percent_Identity=28.8321167883212, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788682, Length=222, Percent_Identity=29.2792792792793, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790281, Length=186, Percent_Identity=30.1075268817204, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=36, Blast_Score=141, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17554946, Length=262, Percent_Identity=31.2977099236641, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17549921, Length=240, Percent_Identity=28.3333333333333, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560910, Length=245, Percent_Identity=28.1632653061224, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17536985, Length=265, Percent_Identity=28.6792452830189, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17535521, Length=254, Percent_Identity=25.5905511811024, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17540306, Length=262, Percent_Identity=30.1526717557252, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17540714, Length=182, Percent_Identity=32.4175824175824, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17534483, Length=225, Percent_Identity=25.3333333333333, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17558304, Length=189, Percent_Identity=28.042328042328, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25144276, Length=182, Percent_Identity=30.2197802197802, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17508953, Length=182, Percent_Identity=30.2197802197802, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508951, Length=182, Percent_Identity=30.2197802197802, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI20129971, Length=247, Percent_Identity=32.3886639676113, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24653477, Length=247, Percent_Identity=32.3886639676113, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24653139, Length=254, Percent_Identity=31.1023622047244, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI19922422, Length=254, Percent_Identity=28.3464566929134, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI19920382, Length=257, Percent_Identity=29.9610894941634, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI24654903, Length=255, Percent_Identity=23.921568627451, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357171, Length=218, Percent_Identity=28.8990825688073, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24650670, Length=203, Percent_Identity=29.064039408867, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27774; Mature: 27643
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDTIRFELDPQTRVATITLNRPDKLNSFTRAMHAALAAALDEAEAGQARALVLTGAGR CCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GFCAGQDLADLDFTPGAATDLGALIDTHFNPLVRRLQGLPLPVIAAVNGIAAGAGANLAL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH ACDLVLAAKSANFIQSFVKIGLVPDSGGTWFLPQRVGFARALGLALTGEKLGAERAAEWG HHHHHHHHHHHHHHHHHHHHCCEECCCCCEECHHHHHHHHHHHHHCCCHHHCHHHHHHHC LIWRAVDDDALAASAAALAADLAKQPTRAIAAIKQTMRAGLTQTLDQQLDLERDRQRELG EEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC QSHDYAEGVAAFIEKRAPRFEGR CCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SHDTIRFELDPQTRVATITLNRPDKLNSFTRAMHAALAAALDEAEAGQARALVLTGAGR CCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GFCAGQDLADLDFTPGAATDLGALIDTHFNPLVRRLQGLPLPVIAAVNGIAAGAGANLAL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH ACDLVLAAKSANFIQSFVKIGLVPDSGGTWFLPQRVGFARALGLALTGEKLGAERAAEWG HHHHHHHHHHHHHHHHHHHHCCEECCCCCEECHHHHHHHHHHHHHCCCHHHCHHHHHHHC LIWRAVDDDALAASAAALAADLAKQPTRAIAAIKQTMRAGLTQTLDQQLDLERDRQRELG EEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC QSHDYAEGVAAFIEKRAPRFEGR CCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]