| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ubiX [C]
Identifier: 238026089
GI number: 238026089
Start: 435043
End: 435639
Strand: Reverse
Name: ubiX [C]
Synonym: bglu_1g04170
Alternate gene names: 238026089
Gene position: 435639-435043 (Counterclockwise)
Preceding gene: 238026090
Following gene: 238026088
Centisome position: 11.15
GC content: 70.52
Gene sequence:
>597_bases ATGCAGGCACGCCCCGCGCCGCCGCGGCGCCTGATCGTCGCGATTACCGGCGCGACCGGCGCGATCTACGGGGTTCGCCT GCTGGAGTTGCTGCGCGCGGCGGGCGGTGTCGAAACCCACCTGCTCGTGTCGGCCGCCGGCTGGTTGAATATCCAGCACG AGCTGAAGCTGTCCAAGGACGAAGTCCAGGCGCGCGCCGACGTCGTCCACGCGGTGCGCGACGTCGGCGCCAGCATCGCC TCGGGTTCGTTCGCGACCGACGGCATGGTGATCGCGCCGTGCTCGATGAAAACGCTCGCGAGCGTCGCGCACGGGCTGTC GGACAATCTCATCGCGCGCGCGGCCGACGTCACGCTCAAGGAGCGGCGCCGGCTCGTGCTGATGGTGCGCGAGACGCCGT TCAACCTCGCCCACCTGCGCAACATGACCGCCGTCACCGAGATGGGCGGCGTGATCTTCCCGCCGCTGCCGGCGTTCTAT GCCCTGCCCGCCTCGATCGACGAACTCGTCGACCATACCGTCACGCGCGTGATCGACATGTTCGGCATCGGTGCGGCGCG CACCGCGCCCTGGGCGGGCCTGGCCGAGGCCGGCTGA
Upstream 100 bases:
>100_bases CTCTACGTGAAGGGCGAATTCGTCGGCGGCTCGGACATCATGATGGAGATGTACCAGTCGGGCGAACTGCAGCAGCTGTT CGCCGCGGCCTGAGCGTTCG
Downstream 100 bases:
>100_bases GCCGCGCGCCCCACGCTGCGGGCGCCCGGCCCGCGCACGCCTCGGTGCGGCGTACCGGATGGGCCGTCACGCACCCGATT GACAACCGTTGGGAATCAAT
Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Products: 2-octaprenylphenol; CO2 [C]
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MQARPAPPRRLIVAITGATGAIYGVRLLELLRAAGGVETHLLVSAAGWLNIQHELKLSKDEVQARADVVHAVRDVGASIA SGSFATDGMVIAPCSMKTLASVAHGLSDNLIARAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGVIFPPLPAFY ALPASIDELVDHTVTRVIDMFGIGAARTAPWAGLAEAG
Sequences:
>Translated_198_residues MQARPAPPRRLIVAITGATGAIYGVRLLELLRAAGGVETHLLVSAAGWLNIQHELKLSKDEVQARADVVHAVRDVGASIA SGSFATDGMVIAPCSMKTLASVAHGLSDNLIARAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGVIFPPLPAFY ALPASIDELVDHTVTRVIDMFGIGAARTAPWAGLAEAG >Mature_198_residues MQARPAPPRRLIVAITGATGAIYGVRLLELLRAAGGVETHLLVSAAGWLNIQHELKLSKDEVQARADVVHAVRDVGASIA SGSFATDGMVIAPCSMKTLASVAHGLSDNLIARAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGVIFPPLPAFY ALPASIDELVDHTVTRVIDMFGIGAARTAPWAGLAEAG
Specific function: Unknown
COG id: COG0163
COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]
Homologues:
Organism=Escherichia coli, GI1788650, Length=187, Percent_Identity=55.6149732620321, Blast_Score=205, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320746, Length=190, Percent_Identity=46.8421052631579, Blast_Score=186, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003382 - InterPro: IPR004507 [H]
Pfam domain/function: PF02441 Flavoprotein [H]
EC number: 4.1.1.- [C]
Molecular weight: Translated: 20965; Mature: 20965
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQARPAPPRRLIVAITGATGAIYGVRLLELLRAAGGVETHLLVSAAGWLNIQHELKLSKD CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHEEEHHCCEEEHHHHHCCHH EVQARADVVHAVRDVGASIASGSFATDGMVIAPCSMKTLASVAHGLSDNLIARAADVTLK HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCHH ERRRLVLMVRETPFNLAHLRNMTAVTEMGGVIFPPLPAFYALPASIDELVDHTVTRVIDM HCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHH FGIGAARTAPWAGLAEAG HCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQARPAPPRRLIVAITGATGAIYGVRLLELLRAAGGVETHLLVSAAGWLNIQHELKLSKD CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHEEEHHCCEEEHHHHHCCHH EVQARADVVHAVRDVGASIASGSFATDGMVIAPCSMKTLASVAHGLSDNLIARAADVTLK HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCHH ERRRLVLMVRETPFNLAHLRNMTAVTEMGGVIFPPLPAFYALPASIDELVDHTVTRVIDM HCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHH FGIGAARTAPWAGLAEAG HCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-octaprenyl-4-hydroxybenzoate [C]
Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]
General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]