| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yegD [H]
Identifier: 238026085
GI number: 238026085
Start: 430235
End: 431494
Strand: Direct
Name: yegD [H]
Synonym: bglu_1g04130
Alternate gene names: 238026085
Gene position: 430235-431494 (Clockwise)
Preceding gene: 238026084
Following gene: 238026087
Centisome position: 11.01
GC content: 71.03
Gene sequence:
>1260_bases ATGACTTATTGCGCGATCGATTTCGGCACCTCCAATTCGGCCGTCGCGTTGCCGGATCCGGACCACCCGGGCGCGATGCG GCTCGCGCCCGTCGAGGGCGATCACCTGACCCTGCCCACCGCGATCTTCTTCAACAACGACGAAGGCTCGCGCGAGTTCG GCCGCACCGCGCTCGCGTCGTACATCGACGGCTTCGACGGCCGGCTGATGCGCTCGATGAAGAGCATCCTCGGCTCGCCG CTCGCGGAAACCACCACCGACCTCGGTGACGGCAGCGGCATCGCCTACACCGAGGTGATCGCGATCTTCATGCAGCACCT GACGCGCAAGGCCCAGGCCTGCGCGGGGGGCGTGATCGAGCGCGCGGTGCTGGGCCGGCCGGTGTTCTTCGTCGACGACG ATCCGCGTGCCGACCGGCTGGCCGAGCAGCAGCTCGCCGCGGCCGCGCGTTCGGTGGGGCTCAAGGAGGTGAGCTTCCAG TACGAGCCGATCGCGGCCGCGTTCGACTACGAGTCGCGGCTGTCGGCCGAGTCGCTGGTGCTGGTGGCCGACATCGGCGG CGGCACTTCGGACTTCTCGCTGGTGCGCGTGGGCCCCGAGCGCATGGCGCGGCTCGAGCGCAAGGGCGACGTGCTGGGCC ATCACGGCGTCCACGTGGCCGGCACCGACTACGACCGCCGCGTCGAGCTGGCCGCGATCCTGCCCGCGTTCGGCTACCGC TCGCTCGACCCGGAGGGCCGCGAACTGCCGAACCGGATCTACTTCGATCTGGCTACCTGGCACCTGATCAACACGGTCTA CACGCCCAAGCGCCTGGCCGAGCTGAAGCTGATGAAGCACCTGTACGTGGACACCCGCCAGTTCGACCGGCTGGTGCGCG TGGTCGAGCAGCGCCTCGGCCACGCGCTGACCGCGCGCGCCGAGGAGGCGAAGATCGGCGTGGCGGCGGGCGGCCAGACC CTGATCGACCTGAACGACGTGGAAGAGGACCTGCAGATCGCGTTCGACGCGGCGCGCCTGATCGAGGCCAGCGCGGACGA CACGGCGCGCATCGTCGAGGCCGCGCGCGAGACCGTGCGGCTGGCGGGCATCGCGCCGCGCGAGGTGGGGGCGCTCTACT TCACCGGCGGCTCGACCGGCCTGTCGTTCCTGTCGGGCGCGCTCGCGGCCGCGTTTCCCGACGCCGAGCCGGTGTTCGGC GACCGTCTCGCGAGCGTGGCGACCGGGCTCGGCATCCACGCGCGGCGGCTGTTCGGCTGA
Upstream 100 bases:
>100_bases CCGAATTTCTCGTGCGCGGGCCCCGTTGTGGCGGCCCGCGCTTCTGTGATAAAAAAGCCCCCCTTTCCGCTTCGCGCCCG CCCAGTCGGCGACCTTTCCC
Downstream 100 bases:
>100_bases AGGCCGGTGGCCCGCGTGGTGGCCCGTCTGGTGGCGAGGCGGTGGCGATGCCGCGGCCCTGCGGGCGTCGTCGTGACGCG CCCTGCCGGCGCCGTCCGCG
Product: Molecular chaperone-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTYCAIDFGTSNSAVALPDPDHPGAMRLAPVEGDHLTLPTAIFFNNDEGSREFGRTALASYIDGFDGRLMRSMKSILGSP LAETTTDLGDGSGIAYTEVIAIFMQHLTRKAQACAGGVIERAVLGRPVFFVDDDPRADRLAEQQLAAAARSVGLKEVSFQ YEPIAAAFDYESRLSAESLVLVADIGGGTSDFSLVRVGPERMARLERKGDVLGHHGVHVAGTDYDRRVELAAILPAFGYR SLDPEGRELPNRIYFDLATWHLINTVYTPKRLAELKLMKHLYVDTRQFDRLVRVVEQRLGHALTARAEEAKIGVAAGGQT LIDLNDVEEDLQIAFDAARLIEASADDTARIVEAARETVRLAGIAPREVGALYFTGGSTGLSFLSGALAAAFPDAEPVFG DRLASVATGLGIHARRLFG
Sequences:
>Translated_419_residues MTYCAIDFGTSNSAVALPDPDHPGAMRLAPVEGDHLTLPTAIFFNNDEGSREFGRTALASYIDGFDGRLMRSMKSILGSP LAETTTDLGDGSGIAYTEVIAIFMQHLTRKAQACAGGVIERAVLGRPVFFVDDDPRADRLAEQQLAAAARSVGLKEVSFQ YEPIAAAFDYESRLSAESLVLVADIGGGTSDFSLVRVGPERMARLERKGDVLGHHGVHVAGTDYDRRVELAAILPAFGYR SLDPEGRELPNRIYFDLATWHLINTVYTPKRLAELKLMKHLYVDTRQFDRLVRVVEQRLGHALTARAEEAKIGVAAGGQT LIDLNDVEEDLQIAFDAARLIEASADDTARIVEAARETVRLAGIAPREVGALYFTGGSTGLSFLSGALAAAFPDAEPVFG DRLASVATGLGIHARRLFG >Mature_418_residues TYCAIDFGTSNSAVALPDPDHPGAMRLAPVEGDHLTLPTAIFFNNDEGSREFGRTALASYIDGFDGRLMRSMKSILGSPL AETTTDLGDGSGIAYTEVIAIFMQHLTRKAQACAGGVIERAVLGRPVFFVDDDPRADRLAEQQLAAAARSVGLKEVSFQY EPIAAAFDYESRLSAESLVLVADIGGGTSDFSLVRVGPERMARLERKGDVLGHHGVHVAGTDYDRRVELAAILPAFGYRS LDPEGRELPNRIYFDLATWHLINTVYTPKRLAELKLMKHLYVDTRQFDRLVRVVEQRLGHALTARAEEAKIGVAAGGQTL IDLNDVEEDLQIAFDAARLIEASADDTARIVEAARETVRLAGIAPREVGALYFTGGSTGLSFLSGALAAAFPDAEPVFGD RLASVATGLGIHARRLFG
Specific function: Unknown
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Escherichia coli, GI87082035, Length=466, Percent_Identity=29.1845493562232, Blast_Score=161, Evalue=9e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 45206; Mature: 45074
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCAIDFGTSNSAVALPDPDHPGAMRLAPVEGDHLTLPTAIFFNNDEGSREFGRTALAS CEEEEEEECCCCCEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHH YIDGFDGRLMRSMKSILGSPLAETTTDLGDGSGIAYTEVIAIFMQHLTRKAQACAGGVIE HHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVLGRPVFFVDDDPRADRLAEQQLAAAARSVGLKEVSFQYEPIAAAFDYESRLSAESLV HHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEEECCEEEEECCHHHCCCCCEE LVADIGGGTSDFSLVRVGPERMARLERKGDVLGHHGVHVAGTDYDRRVELAAILPAFGYR EEEECCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCHHEHHHHHHHHCCCC SLDPEGRELPNRIYFDLATWHLINTVYTPKRLAELKLMKHLYVDTRQFDRLVRVVEQRLG CCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HALTARAEEAKIGVAAGGQTLIDLNDVEEDLQIAFDAARLIEASADDTARIVEAARETVR HHHHCCCHHCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LAGIAPREVGALYFTGGSTGLSFLSGALAAAFPDAEPVFGDRLASVATGLGIHARRLFG HHCCCHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure TYCAIDFGTSNSAVALPDPDHPGAMRLAPVEGDHLTLPTAIFFNNDEGSREFGRTALAS EEEEEEECCCCCEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHH YIDGFDGRLMRSMKSILGSPLAETTTDLGDGSGIAYTEVIAIFMQHLTRKAQACAGGVIE HHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVLGRPVFFVDDDPRADRLAEQQLAAAARSVGLKEVSFQYEPIAAAFDYESRLSAESLV HHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEEECCEEEEECCHHHCCCCCEE LVADIGGGTSDFSLVRVGPERMARLERKGDVLGHHGVHVAGTDYDRRVELAAILPAFGYR EEEECCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCHHEHHHHHHHHCCCC SLDPEGRELPNRIYFDLATWHLINTVYTPKRLAELKLMKHLYVDTRQFDRLVRVVEQRLG CCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HALTARAEEAKIGVAAGGQTLIDLNDVEEDLQIAFDAARLIEASADDTARIVEAARETVR HHHHCCCHHCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LAGIAPREVGALYFTGGSTGLSFLSGALAAAFPDAEPVFGDRLASVATGLGIHARRLFG HHCCCHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]