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The map label for this gene is ybfB [H]

Identifier: 238026083

GI number: 238026083

Start: 427951

End: 429237

Strand: Direct

Name: ybfB [H]

Synonym: bglu_1g04110

Alternate gene names: 238026083

Gene position: 427951-429237 (Clockwise)

Preceding gene: 238026080

Following gene: 238026084

Centisome position: 10.95

GC content: 71.48

Gene sequence:

>1287_bases
ATGAACTGGATGATGGCGGCGGGCGCGCGGGGGCGCTTCCACTACGGCTGGATCGCGGCGGCGGTCGTGTTCCTGGTCCT
GCTCGCGGCGGCCGGCACGCGCGCCACGCCGAGCGTGCTGATGGTGCCGCTCGAGCACGAGCTCGGCTGGAGCCGCGCGA
CGATCTCGCTGGCGATCTCGATCAACATCGCGCTGTACGGCCTGACCGGGCCGTTCGCGGCCGCCGCGATGCAGCGCTTC
GGGCTACGGCCGACGGTGCTCGCCGCGCTGGCGGTGATGGGCACGGGCGTGGCGCTGTCGTCGATGATGACGGCCACCTG
GCAGATGGTGCTGATCTGGGGGGTGATGGTGGGCAGTGCCACCGGCGTGGCCGCGCTGACGCTGTCGGCCACGTTCGTGA
ACCGCTGGTTCGTGGCGCGGCGCGGGCTCGTGATGGGCATGCTGACGGCCAGCTCCGCCACCGGACAGCTGGTGTTCCTG
CCGATGCTGGCGGCGATCGCGCAGCACCACGGCTGGCGGCCGGTGGTGCTGGTGGTGGCGCTGGCGCTCGCGGTGGCGGT
GCCGCTCGTGATCTTCCTGCTGCCGGAGCGGCCGGCCGACCTGCAGCTGCGCCCCTACGGCGAGCCGGACAACGCGCCGC
GCTTGCCGGAGGCCGCGAAGCAGAACCCGCTCGCCGCCGCCTTCGACGCGCTGTTCGACGCGGCGCGCCGGCGCGACTTC
TGGCTGTTGTTCTTCAGCTTCTTCATCTGTGGCGCGAGCACCAACGGCTATATCGGCTCGCACCTGATCGCGATGTGCAG
CGACTACGGCATGAGCGAGGTGCAGGGCGCCTCGCTGCTGGCGGCGATGGGCGTGTTCGACCTGATCGGCACGACGCTCT
CGGGCTGGCTCTCGGACCGCTACGACAGCCGCGTGCTGCTGTTCTGGTACTACGGGCTGCGCGGGCTGTCGCTGATCTAC
CTGCCGCAGGCGTTCGGCATCGACTTCTTCGGGTTGCCGCTGTTCGCGGTGTTCTACGGGCTCGACTGGATCGCCACCGT
GCCGCCCACCGTGCGGCTGGCCACCGACATCTGGGGCAGGGAGCGCGCCCCGGTCGTGTTCGGCTGGATCGTCGCCGGCC
ACCAGCTCGGTGCCGCGTTCGCCGCGCTCGGCGCGGGGCTGCTGCGCGCGAGCCTCGGCACCTATACGCTCGCCTCGATG
ATCTCCGGCGGCCTTTGCATCGTCGGCGCGGTGATCGTACTGCGCATCAAGCGCGGCCGCGTGCGGCCGGTGCCGCAGGC
GGCCTGA

Upstream 100 bases:

>100_bases
GATCGCAAGCTCTTGTGACCGAGTGGTAACGCGCGGTCCTCGTCAACGGGTCGGGGCCGGCGGCATGCCGGGCGCACTGC
GGCCGCAACGGGAGTGCGGG

Downstream 100 bases:

>100_bases
GCCCGCGCCGCCCGCGCCCGGGGACGGCGGCTTCCCGCGCCGCCCTGGGCGCGCCGGGCGGGGGCGGCCGCCGCGTGATA
CGCGCTGGACGGTGAACGAG

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MNWMMAAGARGRFHYGWIAAAVVFLVLLAAAGTRATPSVLMVPLEHELGWSRATISLAISINIALYGLTGPFAAAAMQRF
GLRPTVLAALAVMGTGVALSSMMTATWQMVLIWGVMVGSATGVAALTLSATFVNRWFVARRGLVMGMLTASSATGQLVFL
PMLAAIAQHHGWRPVVLVVALALAVAVPLVIFLLPERPADLQLRPYGEPDNAPRLPEAAKQNPLAAAFDALFDAARRRDF
WLLFFSFFICGASTNGYIGSHLIAMCSDYGMSEVQGASLLAAMGVFDLIGTTLSGWLSDRYDSRVLLFWYYGLRGLSLIY
LPQAFGIDFFGLPLFAVFYGLDWIATVPPTVRLATDIWGRERAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTLASM
ISGGLCIVGAVIVLRIKRGRVRPVPQAA

Sequences:

>Translated_428_residues
MNWMMAAGARGRFHYGWIAAAVVFLVLLAAAGTRATPSVLMVPLEHELGWSRATISLAISINIALYGLTGPFAAAAMQRF
GLRPTVLAALAVMGTGVALSSMMTATWQMVLIWGVMVGSATGVAALTLSATFVNRWFVARRGLVMGMLTASSATGQLVFL
PMLAAIAQHHGWRPVVLVVALALAVAVPLVIFLLPERPADLQLRPYGEPDNAPRLPEAAKQNPLAAAFDALFDAARRRDF
WLLFFSFFICGASTNGYIGSHLIAMCSDYGMSEVQGASLLAAMGVFDLIGTTLSGWLSDRYDSRVLLFWYYGLRGLSLIY
LPQAFGIDFFGLPLFAVFYGLDWIATVPPTVRLATDIWGRERAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTLASM
ISGGLCIVGAVIVLRIKRGRVRPVPQAA
>Mature_428_residues
MNWMMAAGARGRFHYGWIAAAVVFLVLLAAAGTRATPSVLMVPLEHELGWSRATISLAISINIALYGLTGPFAAAAMQRF
GLRPTVLAALAVMGTGVALSSMMTATWQMVLIWGVMVGSATGVAALTLSATFVNRWFVARRGLVMGMLTASSATGQLVFL
PMLAAIAQHHGWRPVVLVVALALAVAVPLVIFLLPERPADLQLRPYGEPDNAPRLPEAAKQNPLAAAFDALFDAARRRDF
WLLFFSFFICGASTNGYIGSHLIAMCSDYGMSEVQGASLLAAMGVFDLIGTTLSGWLSDRYDSRVLLFWYYGLRGLSLIY
LPQAFGIDFFGLPLFAVFYGLDWIATVPPTVRLATDIWGRERAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTLASM
ISGGLCIVGAVIVLRIKRGRVRPVPQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI17550316, Length=188, Percent_Identity=30.3191489361702, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17557434, Length=226, Percent_Identity=26.5486725663717, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32567122, Length=226, Percent_Identity=26.5486725663717, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45785; Mature: 45785

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWMMAAGARGRFHYGWIAAAVVFLVLLAAAGTRATPSVLMVPLEHELGWSRATISLAIS
CCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCEEEEEEEEE
INIALYGLTGPFAAAAMQRFGLRPTVLAALAVMGTGVALSSMMTATWQMVLIWGVMVGSA
EEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
TGVAALTLSATFVNRWFVARRGLVMGMLTASSATGQLVFLPMLAAIAQHHGWRPVVLVVA
CCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
LALAVAVPLVIFLLPERPADLQLRPYGEPDNAPRLPEAAKQNPLAAAFDALFDAARRRDF
HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHH
WLLFFSFFICGASTNGYIGSHLIAMCSDYGMSEVQGASLLAAMGVFDLIGTTLSGWLSDR
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
YDSRVLLFWYYGLRGLSLIYLPQAFGIDFFGLPLFAVFYGLDWIATVPPTVRLATDIWGR
CCCEEEEEEEHHHHCCEEEEECHHHCCCHHHHHHHHHHHCCHHHCCCCCCCEEHHHHCCC
ERAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTLASMISGGLCIVGAVIVLRIKRGR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
VRPVPQAA
CCCCCCCC
>Mature Secondary Structure
MNWMMAAGARGRFHYGWIAAAVVFLVLLAAAGTRATPSVLMVPLEHELGWSRATISLAIS
CCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCEEEEEEEEE
INIALYGLTGPFAAAAMQRFGLRPTVLAALAVMGTGVALSSMMTATWQMVLIWGVMVGSA
EEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
TGVAALTLSATFVNRWFVARRGLVMGMLTASSATGQLVFLPMLAAIAQHHGWRPVVLVVA
CCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
LALAVAVPLVIFLLPERPADLQLRPYGEPDNAPRLPEAAKQNPLAAAFDALFDAARRRDF
HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHH
WLLFFSFFICGASTNGYIGSHLIAMCSDYGMSEVQGASLLAAMGVFDLIGTTLSGWLSDR
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
YDSRVLLFWYYGLRGLSLIYLPQAFGIDFFGLPLFAVFYGLDWIATVPPTVRLATDIWGR
CCCEEEEEEEHHHHCCEEEEECHHHCCCHHHHHHHHHHHCCHHHCCCCCCCEEHHHHCCC
ERAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTLASMISGGLCIVGAVIVLRIKRGR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
VRPVPQAA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]