| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026081
Identifier: 238026081
GI number: 238026081
Start: 426497
End: 427078
Strand: Reverse
Name: 238026081
Synonym: bglu_1g04090
Alternate gene names: NA
Gene position: 427078-426497 (Counterclockwise)
Preceding gene: 238026082
Following gene: 238026076
Centisome position: 10.93
GC content: 68.73
Gene sequence:
>582_bases ATGAACGATCCTCATCAAGACATCCTCGCCGCCACGCGCCACTGGCTCACGCGCGCCGTCATCGGCCTGAACCTGTGCCC GTTCGCGAAAGGCGTCCACGTGAAGGAACAGGTGCGTTACGCCGTCAGCGAGGCCGCCTCGCTCGAGGACGCGCTCGACG ATCTCGAACGCGAGCTGCGCGCGCTGGACGCGGCCGATCCGGACGCGATCGACACCACGCTGCTGATCTATCCGCGCGCG TTCGCCGAGTTCGCCGAGTTCAACGACGCGCTGCAGTTCGCCGACCGCCTGCTGCGCCAGCTGCGGCTCGAAGGCACGCT GCAGATCGCGAGCTTCCATCCCCAGTACCAGTTCGACGGCACCGAGGCCGACGACATCGAGAACTACACGAACCGCGCGC CCTATCCGATCCTGCATCTGCTGCGCGAGGCGAGCATCGACCGCGCGGTGCAGGCGTTTCCCGACGCGGCCGACATCTAC GAGCGCAATCAGGCGACGCTGCGCCGCCTCGGCCACGACGGCTGGCGCGACTGGATGGCGGGCGGCGAACCCGGCCCCGG GACGGCAAGTACCGGCGCGTGA
Upstream 100 bases:
>100_bases CGCCTGAGCCCGGGCCGCGCCGGCCCGGCTGTTTGCGTCACCTGTGATGCGCGGCGGCGCGCCCGCTACAATGCCGGTCG CCGCCTTAGCCGCTTCGACC
Downstream 100 bases:
>100_bases CCGAAAGCCGGGCGCACCGGCCCGGGCGGGCGCCGCGCGCGGCTCAGCCGTGCGCGGCAGCCGCTTGCCCGCTCGCCTCG GGCGCGAAGAAGCGCTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNDPHQDILAATRHWLTRAVIGLNLCPFAKGVHVKEQVRYAVSEAASLEDALDDLERELRALDAADPDAIDTTLLIYPRA FAEFAEFNDALQFADRLLRQLRLEGTLQIASFHPQYQFDGTEADDIENYTNRAPYPILHLLREASIDRAVQAFPDAADIY ERNQATLRRLGHDGWRDWMAGGEPGPGTASTGA
Sequences:
>Translated_193_residues MNDPHQDILAATRHWLTRAVIGLNLCPFAKGVHVKEQVRYAVSEAASLEDALDDLERELRALDAADPDAIDTTLLIYPRA FAEFAEFNDALQFADRLLRQLRLEGTLQIASFHPQYQFDGTEADDIENYTNRAPYPILHLLREASIDRAVQAFPDAADIY ERNQATLRRLGHDGWRDWMAGGEPGPGTASTGA >Mature_193_residues MNDPHQDILAATRHWLTRAVIGLNLCPFAKGVHVKEQVRYAVSEAASLEDALDDLERELRALDAADPDAIDTTLLIYPRA FAEFAEFNDALQFADRLLRQLRLEGTLQIASFHPQYQFDGTEADDIENYTNRAPYPILHLLREASIDRAVQAFPDAADIY ERNQATLRRLGHDGWRDWMAGGEPGPGTASTGA
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21589; Mature: 21589
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPHQDILAATRHWLTRAVIGLNLCPFAKGVHVKEQVRYAVSEAASLEDALDDLERELR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDAADPDAIDTTLLIYPRAFAEFAEFNDALQFADRLLRQLRLEGTLQIASFHPQYQFDG HHCCCCCCHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC TEADDIENYTNRAPYPILHLLREASIDRAVQAFPDAADIYERNQATLRRLGHDGWRDWMA CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHC GGEPGPGTASTGA CCCCCCCCCCCCC >Mature Secondary Structure MNDPHQDILAATRHWLTRAVIGLNLCPFAKGVHVKEQVRYAVSEAASLEDALDDLERELR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDAADPDAIDTTLLIYPRAFAEFAEFNDALQFADRLLRQLRLEGTLQIASFHPQYQFDG HHCCCCCCHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC TEADDIENYTNRAPYPILHLLREASIDRAVQAFPDAADIYERNQATLRRLGHDGWRDWMA CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHC GGEPGPGTASTGA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA