| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026038
Identifier: 238026038
GI number: 238026038
Start: 376730
End: 377443
Strand: Direct
Name: 238026038
Synonym: bglu_1g03650
Alternate gene names: NA
Gene position: 376730-377443 (Clockwise)
Preceding gene: 238026027
Following gene: 238026051
Centisome position: 9.64
GC content: 56.02
Gene sequence:
>714_bases ATGACGCACCCTGACGATGTCAAGAGCAAAGATGAACTGCCCGCCTACAACATTGAGCTGCGCATGCGGCTGCTAAGCCA GTGGATCACCAAAGGTCGCAACGACTGGAAGCAGCTCGAGGAGGCCACAGGCATTAAGGCCGTCAAATGGCGCCACGCCC AAGCAGGCGTCACACGGCCGTCGCTCGAAATGTTCGAGGCACTCTGCAAACTTCACCCGGAGCACGCCTTCTGGCTAGCA ACTGGCATCGCCGACAACGAAGGGGGGCACAAGGCCCCGCAAGTCAACCTTGCGTTTCCTGGTGGTTTCGGCACCATAAT GCCGGACGATTCACTGAGCACCAGCGCCTACTTCCGACAGTGCATGTCGGCTCTCGACACCACTTGGAAAGCACTCGTCC AGTACATGAATCGCCAGCGACCGAAACGGAATGAAGCGGAGGACAAGGCCCACGTTACAAAGGACGATCTCGTCCAATCG TTTCGCGCGGGGATCAACGTCAGCATTCAACTCGCCGCAGGAGAGGCGAACATTGCGCTAGGAAAAGAACAGCAAAAGCA GCTAATTGACCGCCTTATCGGCGCACGATGGGACCACTGGCAAGAAATGACGCAACGTCTACGGGAAAATGCCGGTGTCG ACGAAATGATCGACCAAGGTCGCCAGCGTGAGAAACAGCTGCTTGATGATCTCTATAAAGATAACACTCGATGA
Upstream 100 bases:
>100_bases AGATGTGGGCATCCGCCCATCAATGGCAAAATAGAATTTTTCCACGCCAAAGCGTAGAATATTTACGTAACGTAAAAATA TTACGCCGGGAGGTAGATTA
Downstream 100 bases:
>100_bases GCCCGTGAATTTGAGGGCGAAACTTAATCGTGCGCATTGTTAATAAAAACATACGACGGGCAACGTAGTCTCAACTATTT GTAAATCTCGCTGAGAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTHPDDVKSKDELPAYNIELRMRLLSQWITKGRNDWKQLEEATGIKAVKWRHAQAGVTRPSLEMFEALCKLHPEHAFWLA TGIADNEGGHKAPQVNLAFPGGFGTIMPDDSLSTSAYFRQCMSALDTTWKALVQYMNRQRPKRNEAEDKAHVTKDDLVQS FRAGINVSIQLAAGEANIALGKEQQKQLIDRLIGARWDHWQEMTQRLRENAGVDEMIDQGRQREKQLLDDLYKDNTR
Sequences:
>Translated_237_residues MTHPDDVKSKDELPAYNIELRMRLLSQWITKGRNDWKQLEEATGIKAVKWRHAQAGVTRPSLEMFEALCKLHPEHAFWLA TGIADNEGGHKAPQVNLAFPGGFGTIMPDDSLSTSAYFRQCMSALDTTWKALVQYMNRQRPKRNEAEDKAHVTKDDLVQS FRAGINVSIQLAAGEANIALGKEQQKQLIDRLIGARWDHWQEMTQRLRENAGVDEMIDQGRQREKQLLDDLYKDNTR >Mature_236_residues THPDDVKSKDELPAYNIELRMRLLSQWITKGRNDWKQLEEATGIKAVKWRHAQAGVTRPSLEMFEALCKLHPEHAFWLAT GIADNEGGHKAPQVNLAFPGGFGTIMPDDSLSTSAYFRQCMSALDTTWKALVQYMNRQRPKRNEAEDKAHVTKDDLVQSF RAGINVSIQLAAGEANIALGKEQQKQLIDRLIGARWDHWQEMTQRLRENAGVDEMIDQGRQREKQLLDDLYKDNTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27127; Mature: 26996
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPDDVKSKDELPAYNIELRMRLLSQWITKGRNDWKQLEEATGIKAVKWRHAQAGVTRP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC SLEMFEALCKLHPEHAFWLATGIADNEGGHKAPQVNLAFPGGFGTIMPDDSLSTSAYFRQ CHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH CMSALDTTWKALVQYMNRQRPKRNEAEDKAHVTKDDLVQSFRAGINVSIQLAAGEANIAL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCHHC GKEQQKQLIDRLIGARWDHWQEMTQRLRENAGVDEMIDQGRQREKQLLDDLYKDNTR CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure THPDDVKSKDELPAYNIELRMRLLSQWITKGRNDWKQLEEATGIKAVKWRHAQAGVTRP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC SLEMFEALCKLHPEHAFWLATGIADNEGGHKAPQVNLAFPGGFGTIMPDDSLSTSAYFRQ CHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH CMSALDTTWKALVQYMNRQRPKRNEAEDKAHVTKDDLVQSFRAGINVSIQLAAGEANIAL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCHHC GKEQQKQLIDRLIGARWDHWQEMTQRLRENAGVDEMIDQGRQREKQLLDDLYKDNTR CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA