| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026034
Identifier: 238026034
GI number: 238026034
Start: 373997
End: 375640
Strand: Reverse
Name: 238026034
Synonym: bglu_1g03610
Alternate gene names: NA
Gene position: 375640-373997 (Counterclockwise)
Preceding gene: 238026035
Following gene: 238026033
Centisome position: 9.62
GC content: 60.1
Gene sequence:
>1644_bases TTGGTATCTCGTGATGTTCGTTTTCGGCATGGTCTGCGCGTGGGCAGTGATCGTCGGATTCAAGGAGGCGTGATGCGATT CAGACATGCCGTTTTGTTCGTGACGCTCAGTTGCGTCGTAGGTGCGCAGATGGCGCACGCGCAGGCGCTGCTTGCGCCGG TGGAAGACCTTGTCATCAATCGGGCGGAAGCGGCCATCATCTCGCGCGTTGCAATCTCGCGTGGGTTCGCAGCCAACGAT CCGCGTATCGCGGCGACGCTGACCGGCATGGGGCAGGTCTCGACGGCGCTGAATGTCGTTTCTACGGGGGCTGCTGTGGG ACTTGGATTCGCTGGTGCGCCGGTGTGGCTGACGATCGCGGCGGGGGTGGGCATCCTCGCGGCTGGTTCGGCGTTGTACG CGGGGAGCGTGTCACTCTCGCGCTCACAAGATGGGAAGACGATTTCGGCGACTCAGCCCTTGCCGTCGCTGCCTACTTAT AGCGGAACCGCATACCAGGGCACCCCGCCCGCTGCGGGCACGATGCAATCGCCTTTCGTTTACGGCATAACGTCGTTGGG CATGCAGGCGTATCGCACGAGCGCGTGTCTCGCGACGGATGCTAGCTGCGCGGGCTTTCCTTCGATGCCTAGCCTTACGA CGAGCGGCATGAATTTCGTTCGCAACTTCAACACGGCGGTGCTTGTCGCGGGGACGATCCAAGATGTGCAGTCGTTTGAC CTTTACGAACAGCAATACAACGGCGCGGGCGGAATGGTTGGTGGCGGTACGTCGACGGATAGTCTTGGTTTTGATGTTGT CGGTGTTTCCGTCTATTGGCAGGCCAACGCCGACAACACCAACGAAACGCTGATGGAAAGTCGGACTTTGACGACTTGGA AGACCGATGCCAACGGCAACAACTATAAGTCGACTGATACGGGTGTGCAGCCGGTTACGTGGTGGGCGGCTGGCCCTGGC GTAGCGCCGGTGAGCGGCACCGATTTGTCACAGATCTACCCGAAGCTCTCGTCGGCCTCCCTTAAGACGCCCCTTGATCC GATGACGCTTGCGCAGCTCACGAACCAGACGTGGCAGCAGGCAGCGAATCAGCCTGGATATCAAGGGTTGCCGTACTCAG TGACGCAACCGATTTCATACAGCGACGTGCAGCCGTGGGCGCAAGCAAATCCGAGTTCGGTGCCTGACGTTGGTGACCTA TTTACCCCGGCGAGCGATCCGGGTTCGTCCGTGTCGATCGATCCGGCCGTGCAGCCGGGGCAATCGAGTAGCACGAGCCC GGCGAGTAATCCCAGTACGACGACCGGCAACGAAGTAAACGTCGTGAATACCCCAAACGTGAATGTCACCAACAAGGTGT CTGTTGACCTTGGGCCCGATCCCGGCGTGGGCTCTCCTGCCCTGGAGGCGACACCGACGATTTCGATGATCTTGTCGCCG GTGCTGAATCTGTTGCCCGACCTGAAGCATTGGTCCGTGCCTTCCCACAGTTCGGTGTGTCCCGAGCCGTCGTTTACTGC CTTCGGCCATTCGTTCACGCTGACTGCGCAGTGCGACCTCGCAGAGTCGAACCGCACCTCAATATACACAGCGTTCGCGG CGATGTTTACCCTCGCGGCGATGTTCATCGTACTGCGCGCTTAA
Upstream 100 bases:
>100_bases GGCATGGTGCGCGGGGCTTAACCGTTGGCGTGACGTATGCGCTTGCGGGGGCTGCGGCCCCCGTTTTTGTTGAGGGGATG AATGTGGACGCGAACAGTGC
Downstream 100 bases:
>100_bases GGAACCCTCATGTTTGCGATTCTGGTTTCTGCGGCGAATGTCGCCCTGGGCTTTCTCCTGCGCTCGGTGATTGCGAAGTT CTTCCTGTATTTCGGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MVSRDVRFRHGLRVGSDRRIQGGVMRFRHAVLFVTLSCVVGAQMAHAQALLAPVEDLVINRAEAAIISRVAISRGFAAND PRIAATLTGMGQVSTALNVVSTGAAVGLGFAGAPVWLTIAAGVGILAAGSALYAGSVSLSRSQDGKTISATQPLPSLPTY SGTAYQGTPPAAGTMQSPFVYGITSLGMQAYRTSACLATDASCAGFPSMPSLTTSGMNFVRNFNTAVLVAGTIQDVQSFD LYEQQYNGAGGMVGGGTSTDSLGFDVVGVSVYWQANADNTNETLMESRTLTTWKTDANGNNYKSTDTGVQPVTWWAAGPG VAPVSGTDLSQIYPKLSSASLKTPLDPMTLAQLTNQTWQQAANQPGYQGLPYSVTQPISYSDVQPWAQANPSSVPDVGDL FTPASDPGSSVSIDPAVQPGQSSSTSPASNPSTTTGNEVNVVNTPNVNVTNKVSVDLGPDPGVGSPALEATPTISMILSP VLNLLPDLKHWSVPSHSSVCPEPSFTAFGHSFTLTAQCDLAESNRTSIYTAFAAMFTLAAMFIVLRA
Sequences:
>Translated_547_residues MVSRDVRFRHGLRVGSDRRIQGGVMRFRHAVLFVTLSCVVGAQMAHAQALLAPVEDLVINRAEAAIISRVAISRGFAAND PRIAATLTGMGQVSTALNVVSTGAAVGLGFAGAPVWLTIAAGVGILAAGSALYAGSVSLSRSQDGKTISATQPLPSLPTY SGTAYQGTPPAAGTMQSPFVYGITSLGMQAYRTSACLATDASCAGFPSMPSLTTSGMNFVRNFNTAVLVAGTIQDVQSFD LYEQQYNGAGGMVGGGTSTDSLGFDVVGVSVYWQANADNTNETLMESRTLTTWKTDANGNNYKSTDTGVQPVTWWAAGPG VAPVSGTDLSQIYPKLSSASLKTPLDPMTLAQLTNQTWQQAANQPGYQGLPYSVTQPISYSDVQPWAQANPSSVPDVGDL FTPASDPGSSVSIDPAVQPGQSSSTSPASNPSTTTGNEVNVVNTPNVNVTNKVSVDLGPDPGVGSPALEATPTISMILSP VLNLLPDLKHWSVPSHSSVCPEPSFTAFGHSFTLTAQCDLAESNRTSIYTAFAAMFTLAAMFIVLRA >Mature_547_residues MVSRDVRFRHGLRVGSDRRIQGGVMRFRHAVLFVTLSCVVGAQMAHAQALLAPVEDLVINRAEAAIISRVAISRGFAAND PRIAATLTGMGQVSTALNVVSTGAAVGLGFAGAPVWLTIAAGVGILAAGSALYAGSVSLSRSQDGKTISATQPLPSLPTY SGTAYQGTPPAAGTMQSPFVYGITSLGMQAYRTSACLATDASCAGFPSMPSLTTSGMNFVRNFNTAVLVAGTIQDVQSFD LYEQQYNGAGGMVGGGTSTDSLGFDVVGVSVYWQANADNTNETLMESRTLTTWKTDANGNNYKSTDTGVQPVTWWAAGPG VAPVSGTDLSQIYPKLSSASLKTPLDPMTLAQLTNQTWQQAANQPGYQGLPYSVTQPISYSDVQPWAQANPSSVPDVGDL FTPASDPGSSVSIDPAVQPGQSSSTSPASNPSTTTGNEVNVVNTPNVNVTNKVSVDLGPDPGVGSPALEATPTISMILSP VLNLLPDLKHWSVPSHSSVCPEPSFTAFGHSFTLTAQCDLAESNRTSIYTAFAAMFTLAAMFIVLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56821; Mature: 56821
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRDVRFRHGLRVGSDRRIQGGVMRFRHAVLFVTLSCVVGAQMAHAQALLAPVEDLVIN CCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAEAAIISRVAISRGFAANDPRIAATLTGMGQVSTALNVVSTGAAVGLGFAGAPVWLTIA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEHH AGVGILAAGSALYAGSVSLSRSQDGKTISATQPLPSLPTYSGTAYQGTPPAAGTMQSPFV HCCHHHHCCCEEEECCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH YGITSLGMQAYRTSACLATDASCAGFPSMPSLTTSGMNFVRNFNTAVLVAGTIQDVQSFD HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHH LYEQQYNGAGGMVGGGTSTDSLGFDVVGVSVYWQANADNTNETLMESRTLTTWKTDANGN HHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHCCCEEEEEECCCCC NYKSTDTGVQPVTWWAAGPGVAPVSGTDLSQIYPKLSSASLKTPLDPMTLAQLTNQTWQQ CCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH AANQPGYQGLPYSVTQPISYSDVQPWAQANPSSVPDVGDLFTPASDPGSSVSIDPAVQPG HHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCC QSSSTSPASNPSTTTGNEVNVVNTPNVNVTNKVSVDLGPDPGVGSPALEATPTISMILSP CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH VLNLLPDLKHWSVPSHSSVCPEPSFTAFGHSFTLTAQCDLAESNRTSIYTAFAAMFTLAA HHHHCCCCHHCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHH MFIVLRA HHHHHCC >Mature Secondary Structure MVSRDVRFRHGLRVGSDRRIQGGVMRFRHAVLFVTLSCVVGAQMAHAQALLAPVEDLVIN CCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAEAAIISRVAISRGFAANDPRIAATLTGMGQVSTALNVVSTGAAVGLGFAGAPVWLTIA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEHH AGVGILAAGSALYAGSVSLSRSQDGKTISATQPLPSLPTYSGTAYQGTPPAAGTMQSPFV HCCHHHHCCCEEEECCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH YGITSLGMQAYRTSACLATDASCAGFPSMPSLTTSGMNFVRNFNTAVLVAGTIQDVQSFD HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHH LYEQQYNGAGGMVGGGTSTDSLGFDVVGVSVYWQANADNTNETLMESRTLTTWKTDANGN HHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHCCCEEEEEECCCCC NYKSTDTGVQPVTWWAAGPGVAPVSGTDLSQIYPKLSSASLKTPLDPMTLAQLTNQTWQQ CCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH AANQPGYQGLPYSVTQPISYSDVQPWAQANPSSVPDVGDLFTPASDPGSSVSIDPAVQPG HHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCC QSSSTSPASNPSTTTGNEVNVVNTPNVNVTNKVSVDLGPDPGVGSPALEATPTISMILSP CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH VLNLLPDLKHWSVPSHSSVCPEPSFTAFGHSFTLTAQCDLAESNRTSIYTAFAAMFTLAA HHHHCCCCHHCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHH MFIVLRA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA