| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026027
Identifier: 238026027
GI number: 238026027
Start: 367926
End: 368627
Strand: Direct
Name: 238026027
Synonym: bglu_1g03540
Alternate gene names: NA
Gene position: 367926-368627 (Clockwise)
Preceding gene: 238026026
Following gene: 238026038
Centisome position: 9.42
GC content: 44.3
Gene sequence:
>702_bases TTGGCGATGGCTGATGGCGCGCTTGACAAAATCAAGGAGCAATGCCTTGAATTGGTGTTAAACATTATTCCAATGAGTCA GCTTGGATTTGTGTTTGTGACCGCAGTCGTCGCTCAGCGCTTAAAAGATGGGCATGGAAAATCGACTTTCGATGCGCTCG GTGGACTTGGTTTGAAGAACATGTTTGGCTTAAGTGATGGCATGTTCTGGAGCGTTAATGTATTGGCGATTGGTGCGTGC TTCTTTCTTGCATTGGTGAATGCGTATTTCTTAAAGAAAATACTGCGCCGCTCATTTGATTCAAGCCGTATCTCTGCAAA ACTTGATCATTGGCTCAAGGCTGCATTGGAGGCGGTCAAGGACTTGGATAAGGATGATCGAGCGCCGATACGTGAATCGA TTAAGGGTGAGTTGGAAAGGCGTTTAAAAAAATATCAGGCTAAGCGTCTGCTGAGTGAGGTTCTGTTTTCGGTTTGTGTT TTCTTGGGTTATACGTCGATCTATGTGTTTGCTTTGTGTGACTACGATTTTTCTAAGGTAACCGTCTCTTGGGCTGAAAT TGTGGTCGGGATGTTGAGCGCATTATGTTGTTTCTTGAGTCATCGAAATTCTGTTAGCTACGCATTGGCAAAAGTGGTTC CTTTGCAAGTATATCTGTCAGCGGCAACTGGCGAAATTTCCTTCTTTATCGATGCAGACTAA
Upstream 100 bases:
>100_bases CCATACATGGATCGCGATGATTTTACGATCGTCGCATGCCCGATTGTCGAATATGAATCGTTTGATCCTATGGCGGGCGA TATCCAATTTGTGAAGATAC
Downstream 100 bases:
>100_bases GATATATCCGCATGGTCTGCATCATTGGTCGAGAAAATCGAAATTCGCGGTCGTCATGACGATGCAGCAGCGTGCTGCAC TCCGCAGAGGGTGACGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAMADGALDKIKEQCLELVLNIIPMSQLGFVFVTAVVAQRLKDGHGKSTFDALGGLGLKNMFGLSDGMFWSVNVLAIGAC FFLALVNAYFLKKILRRSFDSSRISAKLDHWLKAALEAVKDLDKDDRAPIRESIKGELERRLKKYQAKRLLSEVLFSVCV FLGYTSIYVFALCDYDFSKVTVSWAEIVVGMLSALCCFLSHRNSVSYALAKVVPLQVYLSAATGEISFFIDAD
Sequences:
>Translated_233_residues MAMADGALDKIKEQCLELVLNIIPMSQLGFVFVTAVVAQRLKDGHGKSTFDALGGLGLKNMFGLSDGMFWSVNVLAIGAC FFLALVNAYFLKKILRRSFDSSRISAKLDHWLKAALEAVKDLDKDDRAPIRESIKGELERRLKKYQAKRLLSEVLFSVCV FLGYTSIYVFALCDYDFSKVTVSWAEIVVGMLSALCCFLSHRNSVSYALAKVVPLQVYLSAATGEISFFIDAD >Mature_232_residues AMADGALDKIKEQCLELVLNIIPMSQLGFVFVTAVVAQRLKDGHGKSTFDALGGLGLKNMFGLSDGMFWSVNVLAIGACF FLALVNAYFLKKILRRSFDSSRISAKLDHWLKAALEAVKDLDKDDRAPIRESIKGELERRLKKYQAKRLLSEVLFSVCVF LGYTSIYVFALCDYDFSKVTVSWAEIVVGMLSALCCFLSHRNSVSYALAKVVPLQVYLSAATGEISFFIDAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25836; Mature: 25704
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMADGALDKIKEQCLELVLNIIPMSQLGFVFVTAVVAQRLKDGHGKSTFDALGGLGLKN CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHH MFGLSDGMFWSVNVLAIGACFFLALVNAYFLKKILRRSFDSSRISAKLDHWLKAALEAVK HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DLDKDDRAPIRESIKGELERRLKKYQAKRLLSEVLFSVCVFLGYTSIYVFALCDYDFSKV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TVSWAEIVVGMLSALCCFLSHRNSVSYALAKVVPLQVYLSAATGEISFFIDAD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure AMADGALDKIKEQCLELVLNIIPMSQLGFVFVTAVVAQRLKDGHGKSTFDALGGLGLKN CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHH MFGLSDGMFWSVNVLAIGACFFLALVNAYFLKKILRRSFDSSRISAKLDHWLKAALEAVK HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DLDKDDRAPIRESIKGELERRLKKYQAKRLLSEVLFSVCVFLGYTSIYVFALCDYDFSKV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TVSWAEIVVGMLSALCCFLSHRNSVSYALAKVVPLQVYLSAATGEISFFIDAD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA