Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is hitA [H]

Identifier: 238026015

GI number: 238026015

Start: 358087

End: 358452

Strand: Direct

Name: hitA [H]

Synonym: bglu_1g03410

Alternate gene names: 238026015

Gene position: 358087-358452 (Clockwise)

Preceding gene: 238026014

Following gene: 238026016

Centisome position: 9.17

GC content: 68.85

Gene sequence:

>366_bases
ATGAGTCACGATCCGGATTGCCTGTTCTGCAAGATCGCGGCGGGCGAGATTCCGAGCGAGATGGTCCACCAGGACGACGA
GTTCGTCGCGTTTCGCGACATTCGTCCGGCGGCCGCCACGCACGTACTCGTGATTCCGCGCCGGCATCTGCCCACGCTGT
CGGCCGCCACGCTTGAGGACGCGCCGCTGCTTGGTAGAATGCTGGTCCTCGTCGCGCGGCTGGCCGAGCAGCTCGGCTGC
GCCTACACGGGCGGCGAGACGGGGTTCCGGACCGTCATCAATACCGGGCCGGGCGGCGGGCAGGAGGTGTTCCACCTGCA
TGCGCACCTGCTGGCGGGGCCGCGCCCGTGGAAGCGGATGGGGTGA

Upstream 100 bases:

>100_bases
TACCGTATCATCAAAGGCTGGCTGTTCCTGAACGACGACAAGGCACTCGATCCGCGGGCCTGGTTCTGACGGGCGGGGGC
GGCGCGACGCGGAGAGCACG

Downstream 100 bases:

>100_bases
GTGGGACCTCGCGGGAAGATCATCGCGGGCCGCGCCGTACCGGCGCCGGCCCGCTCGGGAAAGAGGCCGGCGTCGCCGGC
AGTTGACGCCGCCGCGGCGG

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSHDPDCLFCKIAAGEIPSEMVHQDDEFVAFRDIRPAAATHVLVIPRRHLPTLSAATLEDAPLLGRMLVLVARLAEQLGC
AYTGGETGFRTVINTGPGGGQEVFHLHAHLLAGPRPWKRMG

Sequences:

>Translated_121_residues
MSHDPDCLFCKIAAGEIPSEMVHQDDEFVAFRDIRPAAATHVLVIPRRHLPTLSAATLEDAPLLGRMLVLVARLAEQLGC
AYTGGETGFRTVINTGPGGGQEVFHLHAHLLAGPRPWKRMG
>Mature_120_residues
SHDPDCLFCKIAAGEIPSEMVHQDDEFVAFRDIRPAAATHVLVIPRRHLPTLSAATLEDAPLLGRMLVLVARLAEQLGCA
YTGGETGFRTVINTGPGGGQEVFHLHAHLLAGPRPWKRMG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=108, Percent_Identity=41.6666666666667, Blast_Score=96, Evalue=8e-21,
Organism=Homo sapiens, GI14211923, Length=107, Percent_Identity=37.3831775700935, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=48.6486486486487, Blast_Score=95, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=45.3703703703704, Blast_Score=103, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24581222, Length=108, Percent_Identity=46.2962962962963, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28574010, Length=108, Percent_Identity=46.2962962962963, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13118; Mature: 12987

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDPDCLFCKIAAGEIPSEMVHQDDEFVAFRDIRPAAATHVLVIPRRHLPTLSAATLED
CCCCCCEEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
APLLGRMLVLVARLAEQLGCAYTGGETGFRTVINTGPGGGQEVFHLHAHLLAGPRPWKRM
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
G
C
>Mature Secondary Structure 
SHDPDCLFCKIAAGEIPSEMVHQDDEFVAFRDIRPAAATHVLVIPRRHLPTLSAATLED
CCCCCEEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
APLLGRMLVLVARLAEQLGCAYTGGETGFRTVINTGPGGGQEVFHLHAHLLAGPRPWKRM
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA