| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hisD [H]
Identifier: 238026005
GI number: 238026005
Start: 350465
End: 351790
Strand: Direct
Name: hisD [H]
Synonym: bglu_1g03310
Alternate gene names: 238026005
Gene position: 350465-351790 (Clockwise)
Preceding gene: 238026004
Following gene: 238026006
Centisome position: 8.97
GC content: 70.66
Gene sequence:
>1326_bases ATGCCCATCAAGATTCGCAAACTCGATTCGCGCAGCGAGGGCTTCGGCGCCGCGCTGCGCGCGGTGCTCGCCTTCGAGGC GAGCGAGGACGAGGCGATCGAGCGCTCGGTCGCGGGGATTCTCGCCGACGTGAAGGTGCGCGGCGACGCGGCCGTGCTCG ACTACACGAACCGCTTCGACCGGCTCGGCGCGCCCAGCGTGGCCGCGCTGGAGCTGCGCCAGGACGCGCTCGAGGCCGCG CTCGAGACGCTCGAGCCGAAGCGCCGCGCGGCGCTCGAGGCGGCCGCCGCGCGGGTGCGCGGCTATCACGAGAAACAGAA GCTCGAATGCGGCAGCCATAGCTGGCAGTACACCGAGTCCGACGGCACGGTGCTGGGCCAGAAGGTGCTGCCGCTCGATC GCGTCGGCCTGTACGTGCCGGGCGGCAAGGCCGCCTATCCGTCGTCGGTGCTGATGAACGCGATTCCGGCCCGGGTGGCC GGGGTCGGCGAGATCGTGATGGTGGTGCCCACGCCCGACGGCGTGAAGAACGACCTCGTGCTCGCGGCCGCCTATCTCGG CGGCGTCGATCGCGTGTTCACCATCGGCGGGGCGCAGGCGGTGGCCGCGCTCGCCTACGGCACCGAGACGGTGCCGGCCG TCGACAAGATCTGCGGCCCCGGCAACGCCTACGTGGCCTCGGCCAAGCGCCGCGTGTTCGGCACCGTGGGCATCGACATG ATCGCCGGGCCGTCCGAGATCCTCGTGCTCTGCGACGGCACCACCGATCCGCACTGGGTCGCGATGGACCTGTTCTCGCA GGCCGAGCACGACGAACTGGCGCAGTCGATCCTGCTGTGCCCGGACGCGGGCTTCATCGAGCGCGTCGAGAAGGCGATCG ACGAGCTGCTGCCGGCCATGCCGCGCGAGGCCGTGATCCGCGCCTCGCTGGAAGGGCGCGGCGCGCTGATCACGGTGCGC GACATGGCCGAGGCCTGCAAGATCGCCAACGAGATCGCGCCCGAGCACCTCGAGATCTCGGCGCTCGAGCCGCAGCAATG GGGCAAGCTGATTCGCCATGCCGGCGCGATCTTCCTCGGCCGCTACACGAGCGAGAGCCTCGGCGACTACTGCGCCGGGC CGAACCACGTGCTGCCGACCTCGCGCACGGCGCGCTTCTCGTCGCCGCTGGGCGTCTACGACTTCATCAAGCGCTCGAGC CTGATCGAGGTCAGCGCCGACGGCGCGCACACGCTCGGCGAGATCGCCTCGGAGCTGGCTTACGGCGAGGGGCTGCAGGC GCACGCGAAAAGCGCCGAATACCGGATGCGCAACCACGGCAACTGA
Upstream 100 bases:
>100_bases GCCGCGCTGAAGCCGATCCTCGACGCGTTCGAACGCGCGTCGAAGCAGAGCGGGAGCTGAGCGCTCCCGGCACCGGCGCA TTACCGGAACGAACAGCATC
Downstream 100 bases:
>100_bases GCCGGCGCGGCGGCGCGGGCAAGCGGCAGCCAAGCACCACATGGCCAGCGCGACGGAGCCGGCCGCGGCCGGGCCGGCGG CATCGAGACCCGCGGCCCGG
Product: bifunctional histidinal dehydrogenase/ histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPIKIRKLDSRSEGFGAALRAVLAFEASEDEAIERSVAGILADVKVRGDAAVLDYTNRFDRLGAPSVAALELRQDALEAA LETLEPKRRAALEAAAARVRGYHEKQKLECGSHSWQYTESDGTVLGQKVLPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGVKNDLVLAAAYLGGVDRVFTIGGAQAVAALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPHWVAMDLFSQAEHDELAQSILLCPDAGFIERVEKAIDELLPAMPREAVIRASLEGRGALITVR DMAEACKIANEIAPEHLEISALEPQQWGKLIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSS LIEVSADGAHTLGEIASELAYGEGLQAHAKSAEYRMRNHGN
Sequences:
>Translated_441_residues MPIKIRKLDSRSEGFGAALRAVLAFEASEDEAIERSVAGILADVKVRGDAAVLDYTNRFDRLGAPSVAALELRQDALEAA LETLEPKRRAALEAAAARVRGYHEKQKLECGSHSWQYTESDGTVLGQKVLPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGVKNDLVLAAAYLGGVDRVFTIGGAQAVAALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPHWVAMDLFSQAEHDELAQSILLCPDAGFIERVEKAIDELLPAMPREAVIRASLEGRGALITVR DMAEACKIANEIAPEHLEISALEPQQWGKLIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSS LIEVSADGAHTLGEIASELAYGEGLQAHAKSAEYRMRNHGN >Mature_440_residues PIKIRKLDSRSEGFGAALRAVLAFEASEDEAIERSVAGILADVKVRGDAAVLDYTNRFDRLGAPSVAALELRQDALEAAL ETLEPKRRAALEAAAARVRGYHEKQKLECGSHSWQYTESDGTVLGQKVLPLDRVGLYVPGGKAAYPSSVLMNAIPARVAG VGEIVMVVPTPDGVKNDLVLAAAYLGGVDRVFTIGGAQAVAALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDMI AGPSEILVLCDGTTDPHWVAMDLFSQAEHDELAQSILLCPDAGFIERVEKAIDELLPAMPREAVIRASLEGRGALITVRD MAEACKIANEIAPEHLEISALEPQQWGKLIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSL IEVSADGAHTLGEIASELAYGEGLQAHAKSAEYRMRNHGN
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=413, Percent_Identity=41.6464891041162, Blast_Score=286, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6319819, Length=414, Percent_Identity=35.5072463768116, Blast_Score=230, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47011; Mature: 46880
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKIRKLDSRSEGFGAALRAVLAFEASEDEAIERSVAGILADVKVRGDAAVLDYTNRFD CCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCEEEEEHHHHHH RLGAPSVAALELRQDALEAALETLEPKRRAALEAAAARVRGYHEKQKLECGSHSWQYTES HCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECC DGTVLGQKVLPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGVKNDLV CCCEECCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH LAAAYLGGVDRVFTIGGAQAVAALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPHWVAMDLFSQAEHDELAQSILLCPDAGFIERVEKAIDELLPAM ECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCC PREAVIRASLEGRGALITVRDMAEACKIANEIAPEHLEISALEPQQWGKLIRHAGAIFLG CHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSLIEVSADGAHTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHH YGEGLQAHAKSAEYRMRNHGN HCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIKIRKLDSRSEGFGAALRAVLAFEASEDEAIERSVAGILADVKVRGDAAVLDYTNRFD CEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCEEEEEHHHHHH RLGAPSVAALELRQDALEAALETLEPKRRAALEAAAARVRGYHEKQKLECGSHSWQYTES HCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECC DGTVLGQKVLPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGVKNDLV CCCEECCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH LAAAYLGGVDRVFTIGGAQAVAALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPHWVAMDLFSQAEHDELAQSILLCPDAGFIERVEKAIDELLPAM ECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCC PREAVIRASLEGRGALITVRDMAEACKIANEIAPEHLEISALEPQQWGKLIRHAGAIFLG CHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSLIEVSADGAHTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHH YGEGLQAHAKSAEYRMRNHGN HCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA