Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025986

Identifier: 238025986

GI number: 238025986

Start: 328648

End: 329376

Strand: Direct

Name: 238025986

Synonym: bglu_1g03120

Alternate gene names: NA

Gene position: 328648-329376 (Clockwise)

Preceding gene: 238025984

Following gene: 238025987

Centisome position: 8.41

GC content: 66.53

Gene sequence:

>729_bases
ATGGCACGGCTAGCACGACTCTATGTTCCCGATCAGCCGCAGCACGTCATTCTGCGCGGTCTGGATCAGCAACCGGCGTT
CGTCGATGACCAGGATTACGAGCTTTTCATCGATTGCCTGAAGGCGGCGGCGCGCGATCATCAACTGGCAGTGCATGCCT
ACGTGCTGCTGCCCCGACAGGTTCAACTGCTCGTCACGCCAAGCGACGAGGCGAGCCTGCCGAAGGCGATGCAGGCGGTC
GGCCGGCGCTACGTCGCTCACTTCAACCGGCGCTACTCGCGGCGCGGCACGCTCTGGGAAGGGCGCTACCGCGCCACCGT
GATCGAGGGCGAACGCTACTTCCTGCTGGCGAGCCGGGTGGTGGAGCTGAGCCCGGTGCGTGCCCAGCTGGCCCAGACGG
CCGAGGGCTATCGCTGGTCGAGCTATCGCCACCACATCGGCCTGACCGTCGACAGCCTGATTACCGATCACCCGCTCTAC
TGGGCGCTCGGCAACACGCCGTTCGAACGGCAGCGCGCCTACAAGGAACTCTGCGAGCAGCCGCTCGACGAGCGCCAGAC
CGAGCAGTTGCAGCAGGCCACGCTCAAGGGCTGGGTGCTCGGCGGCGAAACCTACCGCGAGTGGGCGGCGCGCACCGCCA
ATCGCCGCGTTTCGCCGCTACCGCGCGGACGGCCGCGTAAGGTACGTGAAAACAACGGCCCGCACAACCCGCCCGCGCAT
CAGCAATAA

Upstream 100 bases:

>100_bases
CGCACATTCGTGCGAATCCTCCCTGCCGCGCGGGGCTCTGCGCGGATGCAGTCATTCGGGCCTTCGGGTATTTCCTAACG
CGATCAAACGGACATTCAGC

Downstream 100 bases:

>100_bases
CGGCGGCGCGCCCGGCGGCATCCTCGGATGCCGCTTTTTTTGCACCTTTTCGATACGTCCCCAATAAAAAGGCACCAAAT
GGAAACATTCGTTAAATAGG

Product: putative transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAV
GRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLY
WALGNTPFERQRAYKELCEQPLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH
QQ

Sequences:

>Translated_242_residues
MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAV
GRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLY
WALGNTPFERQRAYKELCEQPLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH
QQ
>Mature_241_residues
ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAVG
RRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLYW
ALGNTPFERQRAYKELCEQPLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAHQ
Q

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28042; Mature: 27911

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQ
CCCCEEECCCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCE
VQLLVTPSDEASLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRV
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEEEHHH
VELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLYWALGNTPFERQRAYKELCEQ
HHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC
PLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH
CCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QQ
CC
>Mature Secondary Structure 
ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQ
CCCEEECCCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCE
VQLLVTPSDEASLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRV
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEEEHHH
VELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLYWALGNTPFERQRAYKELCEQ
HHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC
PLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH
CCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA