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The map label for this gene is ugpB [H]

Identifier: 238025980

GI number: 238025980

Start: 322494

End: 323819

Strand: Direct

Name: ugpB [H]

Synonym: bglu_1g03060

Alternate gene names: 238025980

Gene position: 322494-323819 (Clockwise)

Preceding gene: 238025979

Following gene: 238025981

Centisome position: 8.26

GC content: 66.97

Gene sequence:

>1326_bases
ATGAGAGTCAACACCGTGGTTCGCTCGCTGGCTGCCGGCGGCGCGATCTGGTTCGGCATGCAGGGCGCCGCGTTCGCGGC
CACCGAGATCCAGTTCTGGCACGCGATGGAGGCGGCGCTCGGCGACAAGGTCAACGCGATCGCCGAGCAGTTCAACGCCT
CGCAGAGCGACTACCGGATCGTGCCGGTATTCAAGGGCACCTACGACCAGGCGCTCGCGGCCGGCATCGCGGCCTACCGC
AGCGGCAACGCGCCGGCGATCCTGCAGGTGTACGAGGTAGGCACCGCCACCATGATGCAGGCCAAGAAGGCCGTGCTGCC
CGTCTCCGAGGTGTTCCGGCAGGCCGGCGTGCCGCTCGACGAGAAGGCCTTCGTGCCGACCGTGGCGAGCTATTACAGCG
ACGCGAAGACGGGCCACCTGATGTCGATGCCGTTCAACAGCTCGACGCCGTTGCTCTACTACAACAAGGATTGGTTCAAG
AAGGCCGGGCTCGATCCGAACCAGCCGCCGAAGACCTGGGCCGAGGTGAAGACCGACGCCGAGAAGCTGCGCCGCGCCGG
CGCGACCTGCGGCTACACCACGGGCTGGCAGGGCTGGATCCAGATCGAGAACTACAGCGCTTGGCACGGCCTGCCGGTCG
CCACGCGCAACAACGGCTTCGACGGCACCGACGCGGTGCTCGAATTCAACAAGCCGCAGCAGGTCGCCCACATCCAGTTC
CTGCAGCAGATGGCCAGGGACGGCACCTATACCTATGCCGGCCGCAAGGACGAGGCGACCGGCAAGTTCTACAGCGGCGA
CTGCGCGATCATGACGACCTCGTCGGGCGCGCTCGCGACGATCCGCAAGTACGCCAAGTTCGATTTCGGCACCGGCATGA
TGCCGTACGACGACAACGTGAAGGGCGCGCCGCAGAACGCGCTGATCGGCGGCGCGAGCCTGTGGGTGCTGGGCGGCAAG
GACGCGAACACCTACAAGGGCGTCGCGAAGTTCCTCGCCTACCTCAGCTCGCCGGCGGTCGCCGCGAAGTGGCATCAGGA
CACGGGCTACCTGCCCGTCACCACGGCCGCCTACGACCTCACCCGCGAGCAGGGCTTCTACGCCAGGAACCCGGGGGCCG
ACACCGCGATCAAGCAGATGCTGAACAAGCCGCCGCTGCCGTTCACGAAGGGGCTGCGCCTCGGCAACATGCCGCAGATC
CGCACCATCGTCGACGAGGAGCTCGAACAGGTCTGGGCGCAGAAGAAAACACCGCAGGCCGCGCTCGATTCGGCCGTCGC
GCGCGGCAACGAGCTGCTGCGCCGCTTCGAGAAGCAGGGTTCCTGA

Upstream 100 bases:

>100_bases
ATTAGACTGCCCGGTCCGGCTCGGCGCGGACAAACACGCTGGGTTGGCACCCACGCGGGCGGCTGTTCGAGCCGCGCCGC
CATATAACGGAGATAGGTCG

Downstream 100 bases:

>100_bases
GCCTCGCCCGGCCGCGCGCGGGCGCGCGAGGCCGGTTTTCCCGTCGACGGAAAGCCATCGATGTCATCTCGTACCCGTTC
CCGTTCCCGTTTCGGTGCCG

Product: glycerol-3-phosphate transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MRVNTVVRSLAAGGAIWFGMQGAAFAATEIQFWHAMEAALGDKVNAIAEQFNASQSDYRIVPVFKGTYDQALAAGIAAYR
SGNAPAILQVYEVGTATMMQAKKAVLPVSEVFRQAGVPLDEKAFVPTVASYYSDAKTGHLMSMPFNSSTPLLYYNKDWFK
KAGLDPNQPPKTWAEVKTDAEKLRRAGATCGYTTGWQGWIQIENYSAWHGLPVATRNNGFDGTDAVLEFNKPQQVAHIQF
LQQMARDGTYTYAGRKDEATGKFYSGDCAIMTTSSGALATIRKYAKFDFGTGMMPYDDNVKGAPQNALIGGASLWVLGGK
DANTYKGVAKFLAYLSSPAVAAKWHQDTGYLPVTTAAYDLTREQGFYARNPGADTAIKQMLNKPPLPFTKGLRLGNMPQI
RTIVDEELEQVWAQKKTPQAALDSAVARGNELLRRFEKQGS

Sequences:

>Translated_441_residues
MRVNTVVRSLAAGGAIWFGMQGAAFAATEIQFWHAMEAALGDKVNAIAEQFNASQSDYRIVPVFKGTYDQALAAGIAAYR
SGNAPAILQVYEVGTATMMQAKKAVLPVSEVFRQAGVPLDEKAFVPTVASYYSDAKTGHLMSMPFNSSTPLLYYNKDWFK
KAGLDPNQPPKTWAEVKTDAEKLRRAGATCGYTTGWQGWIQIENYSAWHGLPVATRNNGFDGTDAVLEFNKPQQVAHIQF
LQQMARDGTYTYAGRKDEATGKFYSGDCAIMTTSSGALATIRKYAKFDFGTGMMPYDDNVKGAPQNALIGGASLWVLGGK
DANTYKGVAKFLAYLSSPAVAAKWHQDTGYLPVTTAAYDLTREQGFYARNPGADTAIKQMLNKPPLPFTKGLRLGNMPQI
RTIVDEELEQVWAQKKTPQAALDSAVARGNELLRRFEKQGS
>Mature_441_residues
MRVNTVVRSLAAGGAIWFGMQGAAFAATEIQFWHAMEAALGDKVNAIAEQFNASQSDYRIVPVFKGTYDQALAAGIAAYR
SGNAPAILQVYEVGTATMMQAKKAVLPVSEVFRQAGVPLDEKAFVPTVASYYSDAKTGHLMSMPFNSSTPLLYYNKDWFK
KAGLDPNQPPKTWAEVKTDAEKLRRAGATCGYTTGWQGWIQIENYSAWHGLPVATRNNGFDGTDAVLEFNKPQQVAHIQF
LQQMARDGTYTYAGRKDEATGKFYSGDCAIMTTSSGALATIRKYAKFDFGTGMMPYDDNVKGAPQNALIGGASLWVLGGK
DANTYKGVAKFLAYLSSPAVAAKWHQDTGYLPVTTAAYDLTREQGFYARNPGADTAIKQMLNKPPLPFTKGLRLGNMPQI
RTIVDEELEQVWAQKKTPQAALDSAVARGNELLRRFEKQGS

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=417, Percent_Identity=70.0239808153477, Blast_Score=635, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48149; Mature: 48149

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVNTVVRSLAAGGAIWFGMQGAAFAATEIQFWHAMEAALGDKVNAIAEQFNASQSDYRI
CCHHHHHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEE
VPVFKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVLPVSEVFRQAGVPLD
EEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHCCCCCC
EKAFVPTVASYYSDAKTGHLMSMPFNSSTPLLYYNKDWFKKAGLDPNQPPKTWAEVKTDA
CCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHCCCCCCCCCHHHHHHHHHH
EKLRRAGATCGYTTGWQGWIQIENYSAWHGLPVATRNNGFDGTDAVLEFNKPQQVAHIQF
HHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEECCCCHHHHHHHH
LQQMARDGTYTYAGRKDEATGKFYSGDCAIMTTSSGALATIRKYAKFDFGTGMMPYDDNV
HHHHHCCCCEEECCCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
KGAPQNALIGGASLWVLGGKDANTYKGVAKFLAYLSSPAVAAKWHQDTGYLPVTTAAYDL
CCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEHHHHHH
TREQGFYARNPGADTAIKQMLNKPPLPFTKGLRLGNMPQIRTIVDEELEQVWAQKKTPQA
HHHCCCEECCCCCHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
ALDSAVARGNELLRRFEKQGS
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVNTVVRSLAAGGAIWFGMQGAAFAATEIQFWHAMEAALGDKVNAIAEQFNASQSDYRI
CCHHHHHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEE
VPVFKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVLPVSEVFRQAGVPLD
EEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHCCCCCC
EKAFVPTVASYYSDAKTGHLMSMPFNSSTPLLYYNKDWFKKAGLDPNQPPKTWAEVKTDA
CCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHCCCCCCCCCHHHHHHHHHH
EKLRRAGATCGYTTGWQGWIQIENYSAWHGLPVATRNNGFDGTDAVLEFNKPQQVAHIQF
HHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEECCCCHHHHHHHH
LQQMARDGTYTYAGRKDEATGKFYSGDCAIMTTSSGALATIRKYAKFDFGTGMMPYDDNV
HHHHHCCCCEEECCCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
KGAPQNALIGGASLWVLGGKDANTYKGVAKFLAYLSSPAVAAKWHQDTGYLPVTTAAYDL
CCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEHHHHHH
TREQGFYARNPGADTAIKQMLNKPPLPFTKGLRLGNMPQIRTIVDEELEQVWAQKKTPQA
HHHCCCEECCCCCHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
ALDSAVARGNELLRRFEKQGS
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA