| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is aroK [H]
Identifier: 238025977
GI number: 238025977
Start: 319367
End: 319972
Strand: Direct
Name: aroK [H]
Synonym: bglu_1g03030
Alternate gene names: 238025977
Gene position: 319367-319972 (Clockwise)
Preceding gene: 238025976
Following gene: 238025978
Centisome position: 8.18
GC content: 62.71
Gene sequence:
>606_bases TTGCCAGTAAGCTGCGCCACACCACCAGCCAGATTGAAACAGAGGAAGCCGTTGCAAGCGCGGGATCCATACGCAAGCGT ATTTTTCGTCGGACTCATGGGGGCCGGTAAGACCACCGTGGGTCGGGCCGTCGCGCGCCGTCTCGACCGGCCCTTCTTCG ATTCCGATCACGAAATCGAAGCACGTACCGGTACGCGGATCCCGGTCATTTTCGAACTCGAGGGCGAGACCGGTTTTCGC GACCGCGAGGAAAAGATGATCCACGAGCTCACGCTGCGCGGCAATGTCGTGCTCGCGACCGGCGGCGGCGCCGTGATGCG CCCAGCAAACCGCGACGCGCTGCGTTCGCGCGGCATCGTCATCTATCTGCGTGCGAACCCGCACGATCTCTGGCTGAGAA CCCGCAAGGACAAAAATCGCCCGCTGCTGCAGACGGAAGATCCGAAGGCCCGGCTCGAAGCCTTGTACGAGGTGCGCGAT CCGCTCTACCGCGAATGCGCGCACTTCGTGATCGAAACCGGCCGTCCGTCGGTCAACGGACTCGTCAACATGGTGCTGAT GCAGCTCGAGCTGGCCGGCATCGTCGCCAAGCCGCTACAAGCATGA
Upstream 100 bases:
>100_bases CGCGCAGAACGGTCCGCCGGCGGGCGGCCCCGGCTCGGGGGACGAGTCGGCGGCGGCCCGCTGACCGCCCGCGACGGGTG CGCTCGACAAGGCAAGCGCT
Downstream 100 bases:
>100_bases TTACCGTCAACGTCGACCTGGGCGACTGCGCCTACCCGATTCATATCGGCGACGGCCTGATCGGCCGCACCGAACTGTTT GCCCCGCACATCAAGGGCGC
Product: Shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPVSCATPPARLKQRKPLQARDPYASVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGTRIPVIFELEGETGFR DREEKMIHELTLRGNVVLATGGGAVMRPANRDALRSRGIVIYLRANPHDLWLRTRKDKNRPLLQTEDPKARLEALYEVRD PLYRECAHFVIETGRPSVNGLVNMVLMQLELAGIVAKPLQA
Sequences:
>Translated_201_residues MPVSCATPPARLKQRKPLQARDPYASVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGTRIPVIFELEGETGFR DREEKMIHELTLRGNVVLATGGGAVMRPANRDALRSRGIVIYLRANPHDLWLRTRKDKNRPLLQTEDPKARLEALYEVRD PLYRECAHFVIETGRPSVNGLVNMVLMQLELAGIVAKPLQA >Mature_200_residues PVSCATPPARLKQRKPLQARDPYASVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGTRIPVIFELEGETGFRD REEKMIHELTLRGNVVLATGGGAVMRPANRDALRSRGIVIYLRANPHDLWLRTRKDKNRPLLQTEDPKARLEALYEVRDP LYRECAHFVIETGRPSVNGLVNMVLMQLELAGIVAKPLQA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=48.7951807228916, Blast_Score=159, Evalue=9e-41, Organism=Escherichia coli, GI1786587, Length=155, Percent_Identity=36.7741935483871, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 22582; Mature: 22450
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS01128 SHIKIMATE_KINASE ; PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSCATPPARLKQRKPLQARDPYASVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIE CCCCCCCCHHHHHHCCCCCCCCCHHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCCCCEEE ARTGTRIPVIFELEGETGFRDREEKMIHELTLRGNVVLATGGGAVMRPANRDALRSRGIV ECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHCCEE IYLRANPHDLWLRTRKDKNRPLLQTEDPKARLEALYEVRDPLYRECAHFVIETGRPSVNG EEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LVNMVLMQLELAGIVAKPLQA HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PVSCATPPARLKQRKPLQARDPYASVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIE CCCCCCCHHHHHHCCCCCCCCCHHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCCCCEEE ARTGTRIPVIFELEGETGFRDREEKMIHELTLRGNVVLATGGGAVMRPANRDALRSRGIV ECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHCCEE IYLRANPHDLWLRTRKDKNRPLLQTEDPKARLEALYEVRDPLYRECAHFVIETGRPSVNG EEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LVNMVLMQLELAGIVAKPLQA HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA