| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is paaA [H]
Identifier: 238025915
GI number: 238025915
Start: 254100
End: 255098
Strand: Reverse
Name: paaA [H]
Synonym: bglu_1g02410
Alternate gene names: 238025915
Gene position: 255098-254100 (Counterclockwise)
Preceding gene: 238025962
Following gene: 238025914
Centisome position: 6.53
GC content: 67.47
Gene sequence:
>999_bases ATGTACACGCAATCCCTCGATCTTCCCGGCCAGCCCGCCGTCGGCGAGACGGCCAGCGCCGCGCCTGAGCAAGCCCGGTT CGACGCAGTGATCGCCGCCGACGGCAAGATCGAGCCGCAGGACTGGATGCCCGACGCCTATCGCAAAACATTGATCCGCC AGATCTCGCAGCACGCCCATTCCGAGATCGTCGGGATGCTGCCGGAAGGCAACTGGATCACGCGCGCGCCGAGCCTGAAG CGCAAGGCGATCCTGCTCGCCAAGGTGCAGGACGAAGCTGGTCACGGGCTCTATCTTTACAGCGCGGCCGAGACGCTCGG CGTGTCGCGCGACACGCTCGTCGACGCGCTGCACGCCGGCAAGGCCAAGTATTCGAGCATTTTCAACTACCCCACGCCGA GCTGGGCCGACGTCGGCGTGATCGGCTGGCTCGTCGACGGCGCCGCGATCATGAACCAGATTCCCCTTTGCCGCTGCACC TACGGCCCCTATGCGCGCGCCATGATCCGCATCTGCAAGGAGGAATCGTTCCACCAGCGCCAGGGCTTCGACGCGCTGCT GGCGATGATGGCCGGCACGCCGGCGCAGCGCGAGATGGTGCAGCAGGCCGTGAACCGCTGGTGGTGGCCGGTGCTGATGA TGTTCGGCCCGAGCGACGCCGACTCCGTTCACAGCAACCAGTCGGCGAAATGGGGAATCAAGCGCATCTCGAACGACGAC CTGCGCCAGAAATTCGTCGATGCGGCGGTCGAGCAGGCGAAGGTGCTCGGCGTGACCTTGCCCGATCCGGACCTGAAATG GAACGAGGCGCGCGGCCACCACGATTACGGTGCGATCGACTGGGACGAATTCTGGCGCGTCGTCAACGGCGACGGCCCTT GCAACCGTGAGCGGCTGGCGACGCGCGTCAAGGCCCACGAGGACGGCGCGTGGGTCCGCGAGGCCGCGCTGGCCCACGCC GGCAAGCGCGCCCGCCGGGCCGAGCGCCAAGCCGCCTGA
Upstream 100 bases:
>100_bases TGGCCCCACGCACCGGCCTTCGCCTTCTCTAAAAATTAATTAACCGACCGGACGGTTGGTTTATACTTTGATCCACCTCA TCCCGCACGAGACGTTTGTC
Downstream 100 bases:
>100_bases CGCCGCGTCCCTTTCGAATCCGATTCAGGAGACATGCAATGAAACAGGAATGGCCGATCTGGGAAGTCTTCGTGCGCAGC AAGCAGGGGCTCGACCACAA
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MYTQSLDLPGQPAVGETASAAPEQARFDAVIAADGKIEPQDWMPDAYRKTLIRQISQHAHSEIVGMLPEGNWITRAPSLK RKAILLAKVQDEAGHGLYLYSAAETLGVSRDTLVDALHAGKAKYSSIFNYPTPSWADVGVIGWLVDGAAIMNQIPLCRCT YGPYARAMIRICKEESFHQRQGFDALLAMMAGTPAQREMVQQAVNRWWWPVLMMFGPSDADSVHSNQSAKWGIKRISNDD LRQKFVDAAVEQAKVLGVTLPDPDLKWNEARGHHDYGAIDWDEFWRVVNGDGPCNRERLATRVKAHEDGAWVREAALAHA GKRARRAERQAA
Sequences:
>Translated_332_residues MYTQSLDLPGQPAVGETASAAPEQARFDAVIAADGKIEPQDWMPDAYRKTLIRQISQHAHSEIVGMLPEGNWITRAPSLK RKAILLAKVQDEAGHGLYLYSAAETLGVSRDTLVDALHAGKAKYSSIFNYPTPSWADVGVIGWLVDGAAIMNQIPLCRCT YGPYARAMIRICKEESFHQRQGFDALLAMMAGTPAQREMVQQAVNRWWWPVLMMFGPSDADSVHSNQSAKWGIKRISNDD LRQKFVDAAVEQAKVLGVTLPDPDLKWNEARGHHDYGAIDWDEFWRVVNGDGPCNRERLATRVKAHEDGAWVREAALAHA GKRARRAERQAA >Mature_332_residues MYTQSLDLPGQPAVGETASAAPEQARFDAVIAADGKIEPQDWMPDAYRKTLIRQISQHAHSEIVGMLPEGNWITRAPSLK RKAILLAKVQDEAGHGLYLYSAAETLGVSRDTLVDALHAGKAKYSSIFNYPTPSWADVGVIGWLVDGAAIMNQIPLCRCT YGPYARAMIRICKEESFHQRQGFDALLAMMAGTPAQREMVQQAVNRWWWPVLMMFGPSDADSVHSNQSAKWGIKRISNDD LRQKFVDAAVEQAKVLGVTLPDPDLKWNEARGHHDYGAIDWDEFWRVVNGDGPCNRERLATRVKAHEDGAWVREAALAHA GKRARRAERQAA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=304, Percent_Identity=67.1052631578947, Blast_Score=444, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 36927; Mature: 36927
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTQSLDLPGQPAVGETASAAPEQARFDAVIAADGKIEPQDWMPDAYRKTLIRQISQHAH CCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH SEIVGMLPEGNWITRAPSLKRKAILLAKVQDEAGHGLYLYSAAETLGVSRDTLVDALHAG HHHEEECCCCCEEECCCCCHHHEEEEEEECCCCCCCEEEEEHHHHHCCCHHHHHHHHHHC KAKYSSIFNYPTPSWADVGVIGWLVDGAAIMNQIPLCRCTYGPYARAMIRICKEESFHQR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH QGFDALLAMMAGTPAQREMVQQAVNRWWWPVLMMFGPSDADSVHSNQSAKWGIKRISNDD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCCHHHHHHHCCCHH LRQKFVDAAVEQAKVLGVTLPDPDLKWNEARGHHDYGAIDWDEFWRVVNGDGPCNRERLA HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHH TRVKAHEDGAWVREAALAHAGKRARRAERQAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYTQSLDLPGQPAVGETASAAPEQARFDAVIAADGKIEPQDWMPDAYRKTLIRQISQHAH CCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH SEIVGMLPEGNWITRAPSLKRKAILLAKVQDEAGHGLYLYSAAETLGVSRDTLVDALHAG HHHEEECCCCCEEECCCCCHHHEEEEEEECCCCCCCEEEEEHHHHHCCCHHHHHHHHHHC KAKYSSIFNYPTPSWADVGVIGWLVDGAAIMNQIPLCRCTYGPYARAMIRICKEESFHQR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH QGFDALLAMMAGTPAQREMVQQAVNRWWWPVLMMFGPSDADSVHSNQSAKWGIKRISNDD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCCHHHHHHHCCCHH LRQKFVDAAVEQAKVLGVTLPDPDLKWNEARGHHDYGAIDWDEFWRVVNGDGPCNRERLA HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHH TRVKAHEDGAWVREAALAHAGKRARRAERQAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]