BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession	NC_012724
Length	3,906,507

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The map label for this gene is fabG [H]

Identifier: 238025837

GI number: 238025837

Start: 170514

End: 171278

Strand: Reverse

Name: fabG [H]

Synonym: bglu_1g01630

Alternate gene names: 238025837

Gene position: 171278-170514 (Counterclockwise)

Preceding gene: 238025838

Following gene: 238025836

Centisome position: 4.38

GC content: 73.46

Gene sequence:

>765_bases
ATGACCGTCTTCTCCGATCACGCCCTCGCGGGCGGCACCTACCTCGTCACCGGCGCCTCGTCGGGCCTCGGCCGCGCCAC
CGCGGTGGCGATCGCGCGCGCCGGCGGCCGCGTGATCGCCGGCGGGCGCGACGCCGCGCGCCTCGCCGACACGTTCGCGG
CGCTGCCCGGCAACGGCCATCGCGCCGAAGTGCGCGCGCTCGACGACGCCGACCTCACCGCCGAATGGATCTCGACACTG
ACCGAGACGCACGGCGCACTGGCAGGCGTGTTCCACGCGGCCGGCATCGAGCTGATCCGCCCCGCACGCATGACCAAGCA
GGCGCAGCTCGACGATACGTTCGCCAGCAGCCTGTTTGCGGCGTTCGGCATCGCCCGCGCGGCGGCGAAGAAGGGCGTGC
TGGCCGACGGCGCCTCGCTGGTGCTGATGTCGTCGGTGGCCGCCTCGACGGGACAAGTCGGGATGACCGCCTATTCGGCC
GCCAAGGCCGGCGTGGAAGGGCTGATGCGCTCGCTCGCCTGCGAACTCGCGCCGCGCCGAATCCGCGTCAACGCGATCGC
GGCCGGCGCGGTGCGCACCGAAATGCATGCGCGGCTCACGCGCGGCAGCCCCGACGAGGCGGTGGCCGCCTACGAGTCGA
GCCACCTGCTCGGCTTCGGCGAGCCCGAGGACGTGGCTAATGCCGCGCTGTTCCTGCTGTCCGACGCGAGCCGCTGGGTG
ACCGGCACGGCGCTCGTCGTGGACGGCGGCTACCGGGTACGCTGA

Upstream 100 bases:

>100_bases
AACGCCAGCGTCTGGCCCTGTTCGGCTTCGGGGTCGGCTACTCGTGGGCCTCGGCCTCGCTCGTGGCCGGCCCGCTTGCC
GTCGTCGACACCATCGAATC

Downstream 100 bases:

>100_bases
TGAATGGGCCGACGAGCAGGCAGACAGGTGCGCCGCACGATGCCGGGCCGCCCGCCCGCTACCTCGTGGCCGGCGGCGGC
GCGTTCGCGCGCGAGCTGAT

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTVFSDHALAGGTYLVTGASSGLGRATAVAIARAGGRVIAGGRDAARLADTFAALPGNGHRAEVRALDDADLTAEWISTL
TETHGALAGVFHAAGIELIRPARMTKQAQLDDTFASSLFAAFGIARAAAKKGVLADGASLVLMSSVAASTGQVGMTAYSA
AKAGVEGLMRSLACELAPRRIRVNAIAAGAVRTEMHARLTRGSPDEAVAAYESSHLLGFGEPEDVANAALFLLSDASRWV
TGTALVVDGGYRVR

Sequences:

>Translated_254_residues
MTVFSDHALAGGTYLVTGASSGLGRATAVAIARAGGRVIAGGRDAARLADTFAALPGNGHRAEVRALDDADLTAEWISTL
TETHGALAGVFHAAGIELIRPARMTKQAQLDDTFASSLFAAFGIARAAAKKGVLADGASLVLMSSVAASTGQVGMTAYSA
AKAGVEGLMRSLACELAPRRIRVNAIAAGAVRTEMHARLTRGSPDEAVAAYESSHLLGFGEPEDVANAALFLLSDASRWV
TGTALVVDGGYRVR
>Mature_253_residues
TVFSDHALAGGTYLVTGASSGLGRATAVAIARAGGRVIAGGRDAARLADTFAALPGNGHRAEVRALDDADLTAEWISTLT
ETHGALAGVFHAAGIELIRPARMTKQAQLDDTFASSLFAAFGIARAAAKKGVLADGASLVLMSSVAASTGQVGMTAYSAA
KAGVEGLMRSLACELAPRRIRVNAIAAGAVRTEMHARLTRGSPDEAVAAYESSHLLGFGEPEDVANAALFLLSDASRWVT
GTALVVDGGYRVR

Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=32.5301204819277, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=28.9156626506024, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=34.6774193548387, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=32, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=27.4193548387097, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI66933014, Length=247, Percent_Identity=29.1497975708502, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=26.3565891472868, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=29.2490118577075, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=30.5882352941176, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082160, Length=261, Percent_Identity=30.6513409961686, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=29.9180327868852, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=29.8387096774194, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=31.8897637795276, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=30.8641975308642, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=30.327868852459, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=26.7441860465116, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=30, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.4878048780488, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786701, Length=194, Percent_Identity=26.2886597938144, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=27.710843373494, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=36.3636363636364, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI115534694, Length=238, Percent_Identity=32.7731092436975, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=33.1983805668016, Blast_Score=103, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17562910, Length=255, Percent_Identity=27.843137254902, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=29.1187739463602, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=28.4552845528455, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=29.6442687747036, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=26.9961977186312, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=254, Percent_Identity=30.3149606299213, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=28.735632183908, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=27.906976744186, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17561402, Length=266, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=27.5193798449612, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=31.6793893129771, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=273, Percent_Identity=30.03663003663, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=253, Percent_Identity=27.6679841897233, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=27.9693486590038, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=28.1632653061224, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=258, Percent_Identity=30.6201550387597, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=28.4046692607004, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=25.8555133079848, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=118, Percent_Identity=36.4406779661017, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=273, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=260, Percent_Identity=25, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=135, Percent_Identity=36.2962962962963, Blast_Score=66, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=34.6774193548387, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=31.7269076305221, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28571526, Length=260, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=30.3846153846154, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=32.5396825396825, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24644337, Length=118, Percent_Identity=38.9830508474576, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI23397609, Length=259, Percent_Identity=29.3436293436293, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355319, Length=262, Percent_Identity=26.7175572519084, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25952; Mature: 25820

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVFSDHALAGGTYLVTGASSGLGRATAVAIARAGGRVIAGGRDAARLADTFAALPGNGH
CCEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCC
RAEVRALDDADLTAEWISTLTETHGALAGVFHAAGIELIRPARMTKQAQLDDTFASSLFA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHH
AFGIARAAAKKGVLADGASLVLMSSVAASTGQVGMTAYSAAKAGVEGLMRSLACELAPRR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IRVNAIAAGAVRTEMHARLTRGSPDEAVAAYESSHLLGFGEPEDVANAALFLLSDASRWV
EEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHEEECCCCCE
TGTALVVDGGYRVR
EEEEEEECCCEECC
>Mature Secondary Structure 
TVFSDHALAGGTYLVTGASSGLGRATAVAIARAGGRVIAGGRDAARLADTFAALPGNGH
CEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCC
RAEVRALDDADLTAEWISTLTETHGALAGVFHAAGIELIRPARMTKQAQLDDTFASSLFA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHH
AFGIARAAAKKGVLADGASLVLMSSVAASTGQVGMTAYSAAKAGVEGLMRSLACELAPRR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IRVNAIAAGAVRTEMHARLTRGSPDEAVAAYESSHLLGFGEPEDVANAALFLLSDASRWV
EEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHEEECCCCCE
TGTALVVDGGYRVR
EEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]