| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is nitA [H]
Identifier: 238025831
GI number: 238025831
Start: 163277
End: 164200
Strand: Reverse
Name: nitA [H]
Synonym: bglu_1g01570
Alternate gene names: 238025831
Gene position: 164200-163277 (Counterclockwise)
Preceding gene: 238025834
Following gene: 238025830
Centisome position: 4.2
GC content: 72.84
Gene sequence:
>924_bases ATGCCCCAATCCCGCATCGCCGCGCTGCAGATCGGCGCCTCCCCGCTCGGCAAGGCCGAGACCTTGCAGCAGATCCTCGC CTTCGAGGACGCGATCCGCGCCGAGCGGCTGGCGCTGGTGGTGATGCCCGAGGCGCTGCTGGGCGGCTATCCGAAAGGCG AGACGTTCGGCACCCGGCTCGGCTACCGGCTGCCCGAAGGACGCGACGCGTTCGCGCGCTACCACGGCAACGCGATCGAC GTGCCGGGGCCGGAGACCGACGCGCTGGCCGGGCTGTCGGCACGCAGCGGCGCCTCGCTCGTGACCGGCGTGATCGAGCG CGCCGGCGCGACGCTGTACTGCACGGCGCTGTTCTTCGACCCGGCCGCCGGCCTCGTCGCGGCCCACCGCAAGCTGATGC CGACCGGCACCGAGCGGCTGATCTGGGGGCAAGGCGACGGCTCGACGCTGCCGGTGGTGGAGACGGCGGCCGGCCGTGCC GGCGCGGCGATCTGCTGGGAGAACCACATGCCGCTGCTGCGCATGGCGATGTACGCGAAGGGCGTAGAGATCTGGTGCGC ACCGACCGTGGACGAGCGCGAGATCTGGCAGAGCTCGATGCGCCACATCGCGCACGAGGGGCGCTGCTTCGTGGTGAGCG CCTGCCAGGTGCAACCGTCGCCGGCCGCGCTCGGCATCGAGGTGCCGGGCTGGGACCCGCAGCGGCCGCTGATCAACGGC GGCAGCGTGATCGTCGGGCCGCTCGGCGAGGTGCTGGCGGGGCCGCTCGTCGGCGAGACCGGGCTCGTGATCACCGAGGT CGACACCGCCGAACTCACGCGCGCGCGCTACGACTTCGACGTGGCCGGCCATTACGCGCGCCCCGACGTGTTCACGCTGG CCGTCGACGAGCGCCCGAAGCGCAGCGTGGTGTTCCACCGGTGA
Upstream 100 bases:
>100_bases ACGTCGCGGCGCGTTTCGAAGTGCCTGATCGATAACGCAAACCCCACGAACGCACCCGCCCCTGCGATCCAGCGGCTGCG TCGTCTCACCGGAGTCCGCC
Downstream 100 bases:
>100_bases GGCGGCGGCCACGCCGCCGCTCGGGCCGCCGGCCGGCTGCGCCCGACCTCGATGGCGCGCCCCGGGCGGCGGAGCGCCCG AACCCGGCCGCCAGCCGGAT
Product: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPQSRIAALQIGASPLGKAETLQQILAFEDAIRAERLALVVMPEALLGGYPKGETFGTRLGYRLPEGRDAFARYHGNAID VPGPETDALAGLSARSGASLVTGVIERAGATLYCTALFFDPAAGLVAAHRKLMPTGTERLIWGQGDGSTLPVVETAAGRA GAAICWENHMPLLRMAMYAKGVEIWCAPTVDEREIWQSSMRHIAHEGRCFVVSACQVQPSPAALGIEVPGWDPQRPLING GSVIVGPLGEVLAGPLVGETGLVITEVDTAELTRARYDFDVAGHYARPDVFTLAVDERPKRSVVFHR
Sequences:
>Translated_307_residues MPQSRIAALQIGASPLGKAETLQQILAFEDAIRAERLALVVMPEALLGGYPKGETFGTRLGYRLPEGRDAFARYHGNAID VPGPETDALAGLSARSGASLVTGVIERAGATLYCTALFFDPAAGLVAAHRKLMPTGTERLIWGQGDGSTLPVVETAAGRA GAAICWENHMPLLRMAMYAKGVEIWCAPTVDEREIWQSSMRHIAHEGRCFVVSACQVQPSPAALGIEVPGWDPQRPLING GSVIVGPLGEVLAGPLVGETGLVITEVDTAELTRARYDFDVAGHYARPDVFTLAVDERPKRSVVFHR >Mature_306_residues PQSRIAALQIGASPLGKAETLQQILAFEDAIRAERLALVVMPEALLGGYPKGETFGTRLGYRLPEGRDAFARYHGNAIDV PGPETDALAGLSARSGASLVTGVIERAGATLYCTALFFDPAAGLVAAHRKLMPTGTERLIWGQGDGSTLPVVETAAGRAG AAICWENHMPLLRMAMYAKGVEIWCAPTVDEREIWQSSMRHIAHEGRCFVVSACQVQPSPAALGIEVPGWDPQRPLINGG SVIVGPLGEVLAGPLVGETGLVITEVDTAELTRARYDFDVAGHYARPDVFTLAVDERPKRSVVFHR
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=307, Percent_Identity=45.928338762215, Blast_Score=284, Evalue=4e-77, Organism=Saccharomyces cerevisiae, GI6322027, Length=199, Percent_Identity=59.7989949748744, Blast_Score=242, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6322026, Length=111, Percent_Identity=45.945945945946, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 32804; Mature: 32673
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00921 NITRIL_CHT_2 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSRIAALQIGASPLGKAETLQQILAFEDAIRAERLALVVMPEALLGGYPKGETFGTRL CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCHHHHC GYRLPEGRDAFARYHGNAIDVPGPETDALAGLSARSGASLVTGVIERAGATLYCTALFFD CCCCCCCCHHHHHHCCCEECCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEC PAAGLVAAHRKLMPTGTERLIWGQGDGSTLPVVETAAGRAGAAICWENHMPLLRMAMYAK CHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHC GVEIWCAPTVDEREIWQSSMRHIAHEGRCFVVSACQVQPSPAALGIEVPGWDPQRPLING CCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEECC GSVIVGPLGEVLAGPLVGETGLVITEVDTAELTRARYDFDVAGHYARPDVFTLAVDERPK CCEEECCCHHHHCCCCCCCCCEEEEECCHHHHHHHHCCEEECCCCCCCCEEEEEECCCCC RSVVFHR CCCCCCC >Mature Secondary Structure PQSRIAALQIGASPLGKAETLQQILAFEDAIRAERLALVVMPEALLGGYPKGETFGTRL CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCHHHHC GYRLPEGRDAFARYHGNAIDVPGPETDALAGLSARSGASLVTGVIERAGATLYCTALFFD CCCCCCCCHHHHHHCCCEECCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEC PAAGLVAAHRKLMPTGTERLIWGQGDGSTLPVVETAAGRAGAAICWENHMPLLRMAMYAK CHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHC GVEIWCAPTVDEREIWQSSMRHIAHEGRCFVVSACQVQPSPAALGIEVPGWDPQRPLING CCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEECC GSVIVGPLGEVLAGPLVGETGLVITEVDTAELTRARYDFDVAGHYARPDVFTLAVDERPK CCEEECCCHHHHCCCCCCCCCEEEEECCHHHHHHHHCCEEECCCCCCCCEEEEEECCCCC RSVVFHR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400390 [H]