| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025830
Identifier: 238025830
GI number: 238025830
Start: 162531
End: 163100
Strand: Reverse
Name: 238025830
Synonym: bglu_1g01560
Alternate gene names: NA
Gene position: 163100-162531 (Counterclockwise)
Preceding gene: 238025831
Following gene: 238025829
Centisome position: 4.18
GC content: 71.4
Gene sequence:
>570_bases GTGCGGCCGCGTGCTTGCCCTGGAACGTCGCGCGGATGGCCGCGCCGGCCGGCACCCGCGCGGCGACACGCGCGACCGGG TGCCGGCGGCACGCGCCCCGGAGCAGCGCAGGCGGCACGGCCACGGCGCGCAGCAGGCCCGGCGCGCTTGATCCAGTCGG ATACGAGCGCGGGCGGTTTCACTACACTGCCCCGATCGGCCGACAACGCCTGCCTACCGTCATCGAGGAGGATCGACATG GTGAACGACATGCGCGCGGTGGTGATTCGTGCACCGATCCGCGAGCTGCGCGGCTTGCCCACCTGGAAGCTGATTCCATT CGCCAGCATCGCGGGCGGCCCGCACGGTGCACGCACCTACTGCGTCAGCAAGCAAGGCGTGGTGATCACGCTCGACGAGA CCACGCCCGGCATCACGCAGACCCTGAACGTGATCCCGCACGACCAGAACGACGATCGCGCCGCCGCGAGCCATGCGCTG CGCGATCTCGCCCGCGAACTCGACGCAGCCGGCTTCGACCGCCAGTTGACCGCCTCGGCCGACACGCCCGGGCCGCTCGG TAACGCATGA
Upstream 100 bases:
>100_bases CCCGAACCCGGCCGCCAGCCGGATTGGCCGTTCTCGCGCGCAGGCACGGCATTCGGGACGACGGCGGCCCGCGCCGGCGA GGTCACGCGGCGGGGCGAGC
Downstream 100 bases:
>100_bases CGAAAGCGCGCAGGCGATGCGTCCCGGCGCCGAGCACGGCCCGTCATGGCCACGGCGGGCCCGGCCCGGCTCGCGGCTGG TGCGCGAAACCGCGCCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRPRACPGTSRGWPRRPAPARRHARPGAGGTRPGAAQAARPRRAAGPARLIQSDTSAGGFTTLPRSADNACLPSSRRIDM VNDMRAVVIRAPIRELRGLPTWKLIPFASIAGGPHGARTYCVSKQGVVITLDETTPGITQTLNVIPHDQNDDRAAASHAL RDLARELDAAGFDRQLTASADTPGPLGNA
Sequences:
>Translated_189_residues MRPRACPGTSRGWPRRPAPARRHARPGAGGTRPGAAQAARPRRAAGPARLIQSDTSAGGFTTLPRSADNACLPSSRRIDM VNDMRAVVIRAPIRELRGLPTWKLIPFASIAGGPHGARTYCVSKQGVVITLDETTPGITQTLNVIPHDQNDDRAAASHAL RDLARELDAAGFDRQLTASADTPGPLGNA >Mature_189_residues MRPRACPGTSRGWPRRPAPARRHARPGAGGTRPGAAQAARPRRAAGPARLIQSDTSAGGFTTLPRSADNACLPSSRRIDM VNDMRAVVIRAPIRELRGLPTWKLIPFASIAGGPHGARTYCVSKQGVVITLDETTPGITQTLNVIPHDQNDDRAAASHAL RDLARELDAAGFDRQLTASADTPGPLGNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19990; Mature: 19990
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRACPGTSRGWPRRPAPARRHARPGAGGTRPGAAQAARPRRAAGPARLIQSDTSAGGF CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCE TTLPRSADNACLPSSRRIDMVNDMRAVVIRAPIRELRGLPTWKLIPFASIAGGPHGARTY EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCEEE CVSKQGVVITLDETTPGITQTLNVIPHDQNDDRAAASHALRDLARELDAAGFDRQLTASA EECCCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECC DTPGPLGNA CCCCCCCCC >Mature Secondary Structure MRPRACPGTSRGWPRRPAPARRHARPGAGGTRPGAAQAARPRRAAGPARLIQSDTSAGGF CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCE TTLPRSADNACLPSSRRIDMVNDMRAVVIRAPIRELRGLPTWKLIPFASIAGGPHGARTY EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCEEE CVSKQGVVITLDETTPGITQTLNVIPHDQNDDRAAASHALRDLARELDAAGFDRQLTASA EECCCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECC DTPGPLGNA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA