| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025829
Identifier: 238025829
GI number: 238025829
Start: 159582
End: 160115
Strand: Reverse
Name: 238025829
Synonym: bglu_1g01540
Alternate gene names: NA
Gene position: 160115-159582 (Counterclockwise)
Preceding gene: 238025830
Following gene: 238025828
Centisome position: 4.1
GC content: 61.42
Gene sequence:
>534_bases ATGGGATTCGCGTTCATTCGTGAGGGAGACACGACCATGCACGGCGGCCGTGTCCTGACCTACGATCCGACACATACCGT AGACGGGAAGCCGCTCGCACTGGTCGGAGATATGGCCGCTTGCCCTAGATGCGGAGGAGTTTTCCCGACCGTGAAGGTAC GGACCGAGTTGAACATGACTTTCGGCGGCCGCGCCGTGGCATGCGAGGGTGACATGACAGCATGCGAAGCTACGCTGATT GCTTTTCAGGGAACCGCCACTGCATCGCCGACCTCGGGACCGAGCGGCAACGCGGCCTCATCAATTGGCGCAGGGCTCAG CGTGCTTTCGCAGCCTGCGAGCGGTGGCTCAAAGCGGGGGCGATTCCAGGTATTGGACGACGACACCGGCCGGCCGGTGG CCGGCCATCCCTACACCGTTACCGGCTCGAACGGAGAGACAGGGGCAACGGATGCTGACGGTTACACGAGCTGGTTGCAA GCGGACCAGTCGTCATCGTTGACATTCGAAAGGTCAAACTCGAGCTTGTCATGA
Upstream 100 bases:
>100_bases AACTGCAGCCGTGCCACACGGCTATGCCCGGTAATTCCTACAGGCTGAGTACGCGAACGACCGTGCTACATTCCGAACGA CAATTTCATCGGAGACCAAC
Downstream 100 bases:
>100_bases CCGACTACGCCCAAGGAACTGGCGCGGGAGCAACGGGGCCTGGCGACGGTCGCACGAATCCAGTGCGCGTGCGCCGAAAT ACACTCGATGCGCAAGATCG
Product: PAAR repeat-containing protein
Products: NA
Alternate protein names: Bacteriophage; PAAR Motif Family Protein; PaaR Motif-Containing Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MGFAFIREGDTTMHGGRVLTYDPTHTVDGKPLALVGDMAACPRCGGVFPTVKVRTELNMTFGGRAVACEGDMTACEATLI AFQGTATASPTSGPSGNAASSIGAGLSVLSQPASGGSKRGRFQVLDDDTGRPVAGHPYTVTGSNGETGATDADGYTSWLQ ADQSSSLTFERSNSSLS
Sequences:
>Translated_177_residues MGFAFIREGDTTMHGGRVLTYDPTHTVDGKPLALVGDMAACPRCGGVFPTVKVRTELNMTFGGRAVACEGDMTACEATLI AFQGTATASPTSGPSGNAASSIGAGLSVLSQPASGGSKRGRFQVLDDDTGRPVAGHPYTVTGSNGETGATDADGYTSWLQ ADQSSSLTFERSNSSLS >Mature_176_residues GFAFIREGDTTMHGGRVLTYDPTHTVDGKPLALVGDMAACPRCGGVFPTVKVRTELNMTFGGRAVACEGDMTACEATLIA FQGTATASPTSGPSGNAASSIGAGLSVLSQPASGGSKRGRFQVLDDDTGRPVAGHPYTVTGSNGETGATDADGYTSWLQA DQSSSLTFERSNSSLS
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18047; Mature: 17916
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFAFIREGDTTMHGGRVLTYDPTHTVDGKPLALVGDMAACPRCGGVFPTVKVRTELNMT CCEEEEECCCCEEECCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEE FGGRAVACEGDMTACEATLIAFQGTATASPTSGPSGNAASSIGAGLSVLSQPASGGSKRG ECCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCC RFQVLDDDTGRPVAGHPYTVTGSNGETGATDADGYTSWLQADQSSSLTFERSNSSLS EEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure GFAFIREGDTTMHGGRVLTYDPTHTVDGKPLALVGDMAACPRCGGVFPTVKVRTELNMT CEEEEECCCCEEECCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEE FGGRAVACEGDMTACEATLIAFQGTATASPTSGPSGNAASSIGAGLSVLSQPASGGSKRG ECCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCC RFQVLDDDTGRPVAGHPYTVTGSNGETGATDADGYTSWLQADQSSSLTFERSNSSLS EEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA