| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025817
Identifier: 238025817
GI number: 238025817
Start: 147441
End: 147785
Strand: Reverse
Name: 238025817
Synonym: bglu_1g01420
Alternate gene names: NA
Gene position: 147785-147441 (Counterclockwise)
Preceding gene: 238025818
Following gene: 238025816
Centisome position: 3.78
GC content: 66.09
Gene sequence:
>345_bases ATGGCTGAACCCAACACCACCACCGCCGCCGCCCTGTTCGCGGCACTCGGCATCGCTGGCGTCGCTCCGGGCATCGACGG CGACGCGCTGATCGGTGCCTTCGCTGGCGCCGCGCTCGTCGTCGTCACCTCGAAAGACCTCGGCATCGGGCGCCGGGCCG CCTACATGCTGATTTCCCTCGTTATGGGCTACCTGGCGGCACCGGAAATCATGAACGTGGTGCCGATCCACTCTACTGGC GTCGCTGCTTTCCTCTCGGCCGCGCTGGTGATCGCCGTCACCCTGACGCTCATCGAGCGCGTGAAGGGCGTCGATTTCTT CGCGTTCCTGCGCAAAGGGGAGTGA
Upstream 100 bases:
>100_bases GCCATCCTGCCGCTGGGAACCGTCATCGACATGCCGGAGCTGAACACGATCGAACAGACGAAACCCCTCCTGCACCTGTT TGACTGACCTGGAACCCACC
Downstream 100 bases:
>100_bases CATGCACATGTCCTACGCGCTGATCGCGCTCGCGGCGCACCTCGCCGTCATCCTTCGCGTGCTCACGCATCGCAAGGACG GCACCCGCCACCGGTTCCAC
Product: putative phage-encoded membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MAEPNTTTAAALFAALGIAGVAPGIDGDALIGAFAGAALVVVTSKDLGIGRRAAYMLISLVMGYLAAPEIMNVVPIHSTG VAAFLSAALVIAVTLTLIERVKGVDFFAFLRKGE
Sequences:
>Translated_114_residues MAEPNTTTAAALFAALGIAGVAPGIDGDALIGAFAGAALVVVTSKDLGIGRRAAYMLISLVMGYLAAPEIMNVVPIHSTG VAAFLSAALVIAVTLTLIERVKGVDFFAFLRKGE >Mature_113_residues AEPNTTTAAALFAALGIAGVAPGIDGDALIGAFAGAALVVVTSKDLGIGRRAAYMLISLVMGYLAAPEIMNVVPIHSTGV AAFLSAALVIAVTLTLIERVKGVDFFAFLRKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11547; Mature: 11416
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPNTTTAAALFAALGIAGVAPGIDGDALIGAFAGAALVVVTSKDLGIGRRAAYMLISL CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH VMGYLAAPEIMNVVPIHSTGVAAFLSAALVIAVTLTLIERVKGVDFFAFLRKGE HHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure AEPNTTTAAALFAALGIAGVAPGIDGDALIGAFAGAALVVVTSKDLGIGRRAAYMLISL CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH VMGYLAAPEIMNVVPIHSTGVAAFLSAALVIAVTLTLIERVKGVDFFAFLRKGE HHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA