Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025815

Identifier: 238025815

GI number: 238025815

Start: 146358

End: 147170

Strand: Reverse

Name: 238025815

Synonym: bglu_1g01400

Alternate gene names: NA

Gene position: 147170-146358 (Counterclockwise)

Preceding gene: 238025816

Following gene: 238025814

Centisome position: 3.77

GC content: 66.54

Gene sequence:

>813_bases
ATGAACGTCCTGCATTTCAACGACCGTGGCGCCGAAGTCGGTCTGCTGCAGTCGCGCCTCGCGCGCGCCGGCTACACCGT
CCCGACGACACACATTTACGACGAGGCGACCGAGCGCGCAGTCAAAGCGGTGCAGGCCGCCGCCGGCCTGGTCGTCGACG
GCATCGCCGGCCCGAAGACCTACGCGACGCTCGCAAGCGGGCAGCGCAACCCGAAACACATGGCCGATGCTGACCTGATC
GCCGCCGCCGGAAAGCTCGGGGTGTCGGTCGCCTGCGTGCGAGCCGTCAACGAGGTGGAGGCGAAGGGGGTCGGATTCCT
CGACGATGGCCGGCCGAAGATCCTGTTCGAGCGGCACATCATGTACCGCCAGCTCACGGCGAATGTCGGTCAAGCGGCCG
CGGTAGACGCTGCAAAGCAATTCCCAGCCGTGGTGTCCGAATCCGCCGGCGGTTACCAGGGTGGCGCCGCCGAATACGTC
CGGCTCGATACCGCGGCACGCATCGACGCTGCGTCGGCATATGCGTCCGCGAGCTGGGGTGCGTTCCAAGTCATGGGCTT
TCACTGGAAGCGCCTCGGCTACTCAAGTGTCGACGACTTCGTGTCGCAGATGGAAACCAGCGAGGCGGCGCAGCTCGATG
CATTCGTGCGCTTCATCCTGGCCGACAAGGCGCTGCTGGCAGCGCTGAAGGCGCGGAAGTGGGCCACGTTCGCCGCCGCC
TACAACGGCGCGGATTACGCCCGGAATCTGTACGACGTGCGCCTGGAGCGCGCCTACGCCAAGTACGCGGGCAACGACAA
GGCGGCAGCATGA

Upstream 100 bases:

>100_bases
GCACGGCTGGTTTCTTCCAGGCAGCGCTCGCGGTGCTGCTCGCCGTCCTCGTTTATCTCGCGCGCGGCGATGTCGCGCAC
CTACTGCGGAGCAAGCAAGC

Downstream 100 bases:

>100_bases
CACTGCGCGCGTGGATTGTCCTGGCCGCGCTGGCCGCCGCCGCCAGCGCCGGATTCGAGTACGTGCGCCAGCTGCAGGCC
CGCCTCGCTACCGCAGCCGC

Product: Gp43, bacteriophage-acquired protein

Products: NA

Alternate protein names: Phage-Related Cell Wall Hydrolase; Bacteriophage-Acquired Protein; Lytic Transglycosylase Catalytic; Lytic Phage PhiCTX_orf; Gp43 Bacteriophage-Acquired Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNVLHFNDRGAEVGLLQSRLARAGYTVPTTHIYDEATERAVKAVQAAAGLVVDGIAGPKTYATLASGQRNPKHMADADLI
AAAGKLGVSVACVRAVNEVEAKGVGFLDDGRPKILFERHIMYRQLTANVGQAAAVDAAKQFPAVVSESAGGYQGGAAEYV
RLDTAARIDAASAYASASWGAFQVMGFHWKRLGYSSVDDFVSQMETSEAAQLDAFVRFILADKALLAALKARKWATFAAA
YNGADYARNLYDVRLERAYAKYAGNDKAAA

Sequences:

>Translated_270_residues
MNVLHFNDRGAEVGLLQSRLARAGYTVPTTHIYDEATERAVKAVQAAAGLVVDGIAGPKTYATLASGQRNPKHMADADLI
AAAGKLGVSVACVRAVNEVEAKGVGFLDDGRPKILFERHIMYRQLTANVGQAAAVDAAKQFPAVVSESAGGYQGGAAEYV
RLDTAARIDAASAYASASWGAFQVMGFHWKRLGYSSVDDFVSQMETSEAAQLDAFVRFILADKALLAALKARKWATFAAA
YNGADYARNLYDVRLERAYAKYAGNDKAAA
>Mature_270_residues
MNVLHFNDRGAEVGLLQSRLARAGYTVPTTHIYDEATERAVKAVQAAAGLVVDGIAGPKTYATLASGQRNPKHMADADLI
AAAGKLGVSVACVRAVNEVEAKGVGFLDDGRPKILFERHIMYRQLTANVGQAAAVDAAKQFPAVVSESAGGYQGGAAEYV
RLDTAARIDAASAYASASWGAFQVMGFHWKRLGYSSVDDFVSQMETSEAAQLDAFVRFILADKALLAALKARKWATFAAA
YNGADYARNLYDVRLERAYAKYAGNDKAAA

Specific function: Unknown

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28762; Mature: 28762

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLHFNDRGAEVGLLQSRLARAGYTVPTTHIYDEATERAVKAVQAAAGLVVDGIAGPKT
CCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHH
YATLASGQRNPKHMADADLIAAAGKLGVSVACVRAVNEVEAKGVGFLDDGRPKILFERHI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
MYRQLTANVGQAAAVDAAKQFPAVVSESAGGYQGGAAEYVRLDTAARIDAASAYASASWG
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCC
AFQVMGFHWKRLGYSSVDDFVSQMETSEAAQLDAFVRFILADKALLAALKARKWATFAAA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNGADYARNLYDVRLERAYAKYAGNDKAAA
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNVLHFNDRGAEVGLLQSRLARAGYTVPTTHIYDEATERAVKAVQAAAGLVVDGIAGPKT
CCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHH
YATLASGQRNPKHMADADLIAAAGKLGVSVACVRAVNEVEAKGVGFLDDGRPKILFERHI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
MYRQLTANVGQAAAVDAAKQFPAVVSESAGGYQGGAAEYVRLDTAARIDAASAYASASWG
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCC
AFQVMGFHWKRLGYSSVDDFVSQMETSEAAQLDAFVRFILADKALLAALKARKWATFAAA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNGADYARNLYDVRLERAYAKYAGNDKAAA
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA