| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025814
Identifier: 238025814
GI number: 238025814
Start: 145933
End: 146361
Strand: Reverse
Name: 238025814
Synonym: bglu_1g01390
Alternate gene names: NA
Gene position: 146361-145933 (Counterclockwise)
Preceding gene: 238025815
Following gene: 238025813
Centisome position: 3.75
GC content: 69.7
Gene sequence:
>429_bases ATGACACTGCGCGCGTGGATTGTCCTGGCCGCGCTGGCCGCCGCCGCCAGCGCCGGATTCGAGTACGTGCGCCAGCTGCA GGCCCGCCTCGCTACCGCAGCCGCGCAGGTAGCCACGGCGCGCCAGGATCTCGGCGCCCGTGACGCGACCATTGCGCGCA TGCAAGCCGACGCACGCGACAAGGACGCCCAGCTCGCGAAGCTGGCGCACGCGCGCGCAGCTGTCGATTCGGCGCTCACC ACCTCCCAACAGCAACTGCGGAACCTCATCGATGGCAACGAATCGATTCGCGCCTGGGCTGATAGCCCTCTCCCTGGCGA TGTTGTGCGCCTGCACGCAAGCCCCGCCCTCACCGGCGGCGACGATTACGCTTCGCGAGTGCGCGACGGTGACGCGCTGC ACGATGCCGGCGATGCAGCCGCGCAGTAA
Upstream 100 bases:
>100_bases TCGCCGCCGCCTACAACGGCGCGGATTACGCCCGGAATCTGTACGACGTGCGCCTGGAGCGCGCCTACGCCAAGTACGCG GGCAACGACAAGGCGGCAGC
Downstream 100 bases:
>100_bases CGGCGAGCTGAGCAACGCTCTACAGGCCGCGCGGGCAGCGTGGGCGCGGTGCGCGGCCGAGGTCGACATGGTGGCCGCAT GCCAGGCGAAGGCGGGGCGC
Product: putative phage-encoded lipoprotein
Products: NA
Alternate protein names: Protein LysB; Phage-Encoded Lipoprotein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTLRAWIVLAALAAAASAGFEYVRQLQARLATAAAQVATARQDLGARDATIARMQADARDKDAQLAKLAHARAAVDSALT TSQQQLRNLIDGNESIRAWADSPLPGDVVRLHASPALTGGDDYASRVRDGDALHDAGDAAAQ
Sequences:
>Translated_142_residues MTLRAWIVLAALAAAASAGFEYVRQLQARLATAAAQVATARQDLGARDATIARMQADARDKDAQLAKLAHARAAVDSALT TSQQQLRNLIDGNESIRAWADSPLPGDVVRLHASPALTGGDDYASRVRDGDALHDAGDAAAQ >Mature_141_residues TLRAWIVLAALAAAASAGFEYVRQLQARLATAAAQVATARQDLGARDATIARMQADARDKDAQLAKLAHARAAVDSALTT SQQQLRNLIDGNESIRAWADSPLPGDVVRLHASPALTGGDDYASRVRDGDALHDAGDAAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14858; Mature: 14726
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRAWIVLAALAAAASAGFEYVRQLQARLATAAAQVATARQDLGARDATIARMQADARD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC KDAQLAKLAHARAAVDSALTTSQQQLRNLIDGNESIRAWADSPLPGDVVRLHASPALTGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEECCCCCCCC DDYASRVRDGDALHDAGDAAAQ HHHHHHHCCCCHHHCCCCCCCC >Mature Secondary Structure TLRAWIVLAALAAAASAGFEYVRQLQARLATAAAQVATARQDLGARDATIARMQADARD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC KDAQLAKLAHARAAVDSALTTSQQQLRNLIDGNESIRAWADSPLPGDVVRLHASPALTGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEECCCCCCCC DDYASRVRDGDALHDAGDAAAQ HHHHHHHCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA