| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025801
Identifier: 238025801
GI number: 238025801
Start: 136164
End: 136502
Strand: Reverse
Name: 238025801
Synonym: bglu_1g01260
Alternate gene names: NA
Gene position: 136502-136164 (Counterclockwise)
Preceding gene: 238025802
Following gene: 238025800
Centisome position: 3.49
GC content: 64.6
Gene sequence:
>339_bases ATGACGAACCACCACAACGACACGACCACCACCACCGAGAACAACGCGGCGAACACGCACACGCTCGATACGCCGATCGA GCGCGACGGGCAGACCATCACCACGGTGACCCTCACCAAGCCGGACACCGGCGCGCTGCGCGGCACTTCGCTGGCCGCCC TGGTCAACCTCGACGTGGATGCGCTGTGCAAGGTGCTGCCGCGCATCACCACGCCCACTCTCCATCCGTCCGATATCCGC CTGATGGACCCGGCCGACCTCGTTGCGCTGGGAGGTCTGTTCGCCGGTTTTTTGATGCCGAAGGCCGTGAAAGCGAGCAT GGAATTCCCGACCGAGTAG
Upstream 100 bases:
>100_bases CGGCACGGACCTTGCGGCCGGGCTGCGCAACGCGATCGGCCTGTAACCACCCGCCGGCGCCCGTCGCCGGCACACCACGA ACACCACCAGGAACACCACC
Downstream 100 bases:
>100_bases AAGACGCGATGGCCGATATCGCAACGGTGTTCCATTGGGCACCGCGCGATATGGAAGGCTTCTCCCTCTCTGAGCTGATG GACTGGCGCGAGCGCGCGCG
Product: Gp28, phage tail protein E
Products: NA
Alternate protein names: Phage Tail Protein; GpE+E; Phage Protein
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTNHHNDTTTTTENNAANTHTLDTPIERDGQTITTVTLTKPDTGALRGTSLAALVNLDVDALCKVLPRITTPTLHPSDIR LMDPADLVALGGLFAGFLMPKAVKASMEFPTE
Sequences:
>Translated_112_residues MTNHHNDTTTTTENNAANTHTLDTPIERDGQTITTVTLTKPDTGALRGTSLAALVNLDVDALCKVLPRITTPTLHPSDIR LMDPADLVALGGLFAGFLMPKAVKASMEFPTE >Mature_111_residues TNHHNDTTTTTENNAANTHTLDTPIERDGQTITTVTLTKPDTGALRGTSLAALVNLDVDALCKVLPRITTPTLHPSDIRL MDPADLVALGGLFAGFLMPKAVKASMEFPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11955; Mature: 11824
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHHNDTTTTTENNAANTHTLDTPIERDGQTITTVTLTKPDTGALRGTSLAALVNLDVD CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCHH ALCKVLPRITTPTLHPSDIRLMDPADLVALGGLFAGFLMPKAVKASMEFPTE HHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TNHHNDTTTTTENNAANTHTLDTPIERDGQTITTVTLTKPDTGALRGTSLAALVNLDVD CCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCHH ALCKVLPRITTPTLHPSDIRLMDPADLVALGGLFAGFLMPKAVKASMEFPTE HHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA