Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025787

Identifier: 238025787

GI number: 238025787

Start: 125175

End: 127970

Strand: Reverse

Name: 238025787

Synonym: bglu_1g01120

Alternate gene names: NA

Gene position: 127970-125175 (Counterclockwise)

Preceding gene: 238025788

Following gene: 238025786

Centisome position: 3.28

GC content: 68.31

Gene sequence:

>2796_bases
ATGGCCTCGATCGACGAACTGAAACAGCGCATCGACCTGCACGACCTGGCCGACCGCCTCGGCATGAAGCGCGGCCGCGG
CGGCGATCGTGCGCTCTACCACTCGCCGCAGCACGAGGACAAGAGCCCGTCGCTGTCCATCTTCGTCAACCACCCGAAGC
ACGGCACCGGCTGGCGCGACCACAGCGCCGACACGGGCGGATCCTGCGTGGATCTCGTCATGTACGCCCGCGGCGGATCC
GTCGCCGATGCCGTGCGCTACCTCCACGACGCCTACGGCATCCCCACCACGGCGCCGGCCGCTGCCGGCGAGCGCCGCGA
GAAATCGAAGATCGATTACATCGCCGACAAGTGCCTGGCCGAGCGCGACGGCGCCCGCGCCTATCTCGCCGGCCGGGGCA
TTTCGGCGGCCGCGATCGATGCAGCGATCGCCGCGCGATCGCTCGGCTTCAACACCTGGACGAGCTCGAAGGTGGCCGCC
GGCGAAGTCGGCCATGCCGGGCCGGCCGCCGCGTTCGTGGTGCGCTCGCCGCACGACGGCCGCGTGGTAGCCGTCGACAT
GCGCTACCTCGATCCCGCCATCAATGGCGGCGTCAAGACGCAGACGCAGGGCGACAAAGCCGGCTTCGGCTGGACGGCCG
ATCCGCGCCGGCTCGCCAAGGCCAAGCGCGTCTACGTCGTCGAAAGCGCGATCAATGCCCTGTCGATCGACAGCTGCGCG
CTGCCCGGCGCCGCCGCGCTCGCGCTGCGCGGCTTGGCGAACGTCGGCGACATCGATTTCACGTTTCTCCGTGGCCGCCA
GGTCGTCATCTGCCTGGACAACGATGAACCGTTCGGCGACGGCCACCCGCGCGCCGGCCACCGGCCTGGCCCTGAAGCTG
CCTGGGCGCTCTACGAACGCCTGACGAGCCTGAATATCAGCGCAGTGCTGGTCGACCAGGCCGAGTGGCTGGCCGACCTC
GGCGACGGCGAAGCGAAGGCAAAGCCGATCAACGACGTGAACGACTACCTGCAGGTGCGCGGCGCCGACCAGCTCGGGCG
CGCGCTCGACCAGCTCGAACCGTGGTTGATCGCCGGCCTGGCCGGCGACGCCACGCGCCGCGGCCGGCCGCGCATCTTCC
TGCCCTCGCACGATTTCGCGCAGTATTGGCGCTTCCGCGTGCGGCCCGACTTCACCAGCTACATCACGAAGATGGACCGC
AACGAGGAATCGGGCGTGGAAACGCCCGTCATGACCGACCTGTGCGGCTTCCGGATCGCCGGCATTAGCCGCGTGTCCGT
GGCGAGCGCGACGGCCACCATGACGGGCGACGACGACCAGGCGCCGACCGTCTATTTCGCTGTCTCCGTGCAGGCGCCGC
GGCACGGCCCGCAGCTGATTCGCCGCGTGATGCTCGACGACCAGCTGCACAACGTCGACCAGTGGGGCAAGTTCGGTCCG
ATCTGGGCACCGGCGCCGTTTAAGCGCATGGTCAACATCCTGGAGCGCGGCGCCGACCTCGGCGCGCGCCAGGCCGCCAA
TTTCGTCGGCCTGGCCTGGCGCGATGGCCGGCTGATCGTCAACGAAGGCCCCGACTGCTATTTCACCGAAGCCGACAAGC
AGTGCCCGTATCACAACCTGACCTTCCCCAGCGGCCCGATCGGCGACGCGCGCCGCGTGATCACGGCCTATCAGGCGACG
TTCAAGCAGAACGCGGCCACCATCCCCTTGGTATGGGCGCTCGGCGGCCACCTGAAGGCGCTGCTGGGCTTCTGGCCGCA
CATGACCGTGCAGGCCAACAAGGGCGCCGGCAAGTCGACGCTGATCAAGCGCCTGGAACGCTCGCTGGCCTTCACCATGT
TTTCCGGCCAGTCCCTGCAGACCGAATTCCGGCTGCTGACCAGCATTAGCCACACGAGCCACCCGGTCGGCTGGGAAGAA
CTGTCCGCGCGCCGGCAAGACGTGATCGACAAGGCCGTGGGCCTGCTGCAAGAGAACTACCAGTACACCGTCACCCGCCG
CGGCACCGACATGACCGAATACCTGTTGTGCGCGCCCGTGATGCTGGCCGGCGAGGATGTGCCCGTGCGCAGCTTGCTCG
GCAAGCTGGTGCGCACCACGCTGACCGGCAAGCGCGGCCCGCTGCTGCCCGACGACCTGCCCCGCTTCCCAGTTCGACAG
TGGCTCGAATTCCTCGCCGGCCTGGATAAGCGCAGCGTGCTGGACCAGTACGGCAAGCTGCGCGACAAGGCGCTGGCCAA
CTGCCGCGCGAGCGGCGAGGATGACGGCGCCAAGCGGATGGCCGGCAACTACGCGGCGCTCGCGCTGGCCTGGCGCTACC
TATGCGACTTCGCCGGCATGGACCCGAGCGAAGGCGACTTTCCCCGCGACCTGCTGACCGAAATGAACGGCCACGTCGCC
GAAACCAGCGCCGACCGCGAGCCCTGGGTCTGGATCATGGAAACGATCCTGTCGGAAATCGACGGCGGCAACTACAAGCA
CCCCTTCACGTTCGATACCGTCGACGGCGAGTTCTGCCTGCTGCTGCGCTCCGGGCATGTGATGGACCACATCGCCCATA
CCAGCTCGCTGCGCGACAAGTGGAACGGCCTGCCGGTCAAGTCCGATCGCGTGTTCAAGGCGCAGCTCAAGCACGCCGGC
GTCGTCGTCGGCGAAAAAGAGGTGGAGCGACGCATCTACACCCGCCGCGTGGCGCACCTGGTGCCGATTTCCCTGGAGCG
CCTGGCCGCCTTCGGCCTCTACGTGTCCGTGCGCGAGGACCTGGCCAGCGACGCTTTGCAGGGCGCAGCCGCATGA

Upstream 100 bases:

>100_bases
CTGGCCTTCCCCGAGTCGGCCGAAGCGCTGCACGCCCTTGTCCTTTCCCCGGCCACCACCGGCAACCCGACCCAAGCAAC
ACCGGAGCACCAGCAATAAG

Downstream 100 bases:

>100_bases
CCCGCTCTCACCGCCCGCGGCCGCCGTGCGGCCGCTGCCCTTACCCCGCATTTTCCGGCCGCGCAGCGGCCCTGAATTCG
GCCTTCCCGTGCGCGCCGGC

Product: CHC2-type zinc finger protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 931; Mature: 930

Protein sequence:

>931_residues
MASIDELKQRIDLHDLADRLGMKRGRGGDRALYHSPQHEDKSPSLSIFVNHPKHGTGWRDHSADTGGSCVDLVMYARGGS
VADAVRYLHDAYGIPTTAPAAAGERREKSKIDYIADKCLAERDGARAYLAGRGISAAAIDAAIAARSLGFNTWTSSKVAA
GEVGHAGPAAAFVVRSPHDGRVVAVDMRYLDPAINGGVKTQTQGDKAGFGWTADPRRLAKAKRVYVVESAINALSIDSCA
LPGAAALALRGLANVGDIDFTFLRGRQVVICLDNDEPFGDGHPRAGHRPGPEAAWALYERLTSLNISAVLVDQAEWLADL
GDGEAKAKPINDVNDYLQVRGADQLGRALDQLEPWLIAGLAGDATRRGRPRIFLPSHDFAQYWRFRVRPDFTSYITKMDR
NEESGVETPVMTDLCGFRIAGISRVSVASATATMTGDDDQAPTVYFAVSVQAPRHGPQLIRRVMLDDQLHNVDQWGKFGP
IWAPAPFKRMVNILERGADLGARQAANFVGLAWRDGRLIVNEGPDCYFTEADKQCPYHNLTFPSGPIGDARRVITAYQAT
FKQNAATIPLVWALGGHLKALLGFWPHMTVQANKGAGKSTLIKRLERSLAFTMFSGQSLQTEFRLLTSISHTSHPVGWEE
LSARRQDVIDKAVGLLQENYQYTVTRRGTDMTEYLLCAPVMLAGEDVPVRSLLGKLVRTTLTGKRGPLLPDDLPRFPVRQ
WLEFLAGLDKRSVLDQYGKLRDKALANCRASGEDDGAKRMAGNYAALALAWRYLCDFAGMDPSEGDFPRDLLTEMNGHVA
ETSADREPWVWIMETILSEIDGGNYKHPFTFDTVDGEFCLLLRSGHVMDHIAHTSSLRDKWNGLPVKSDRVFKAQLKHAG
VVVGEKEVERRIYTRRVAHLVPISLERLAAFGLYVSVREDLASDALQGAAA

Sequences:

>Translated_931_residues
MASIDELKQRIDLHDLADRLGMKRGRGGDRALYHSPQHEDKSPSLSIFVNHPKHGTGWRDHSADTGGSCVDLVMYARGGS
VADAVRYLHDAYGIPTTAPAAAGERREKSKIDYIADKCLAERDGARAYLAGRGISAAAIDAAIAARSLGFNTWTSSKVAA
GEVGHAGPAAAFVVRSPHDGRVVAVDMRYLDPAINGGVKTQTQGDKAGFGWTADPRRLAKAKRVYVVESAINALSIDSCA
LPGAAALALRGLANVGDIDFTFLRGRQVVICLDNDEPFGDGHPRAGHRPGPEAAWALYERLTSLNISAVLVDQAEWLADL
GDGEAKAKPINDVNDYLQVRGADQLGRALDQLEPWLIAGLAGDATRRGRPRIFLPSHDFAQYWRFRVRPDFTSYITKMDR
NEESGVETPVMTDLCGFRIAGISRVSVASATATMTGDDDQAPTVYFAVSVQAPRHGPQLIRRVMLDDQLHNVDQWGKFGP
IWAPAPFKRMVNILERGADLGARQAANFVGLAWRDGRLIVNEGPDCYFTEADKQCPYHNLTFPSGPIGDARRVITAYQAT
FKQNAATIPLVWALGGHLKALLGFWPHMTVQANKGAGKSTLIKRLERSLAFTMFSGQSLQTEFRLLTSISHTSHPVGWEE
LSARRQDVIDKAVGLLQENYQYTVTRRGTDMTEYLLCAPVMLAGEDVPVRSLLGKLVRTTLTGKRGPLLPDDLPRFPVRQ
WLEFLAGLDKRSVLDQYGKLRDKALANCRASGEDDGAKRMAGNYAALALAWRYLCDFAGMDPSEGDFPRDLLTEMNGHVA
ETSADREPWVWIMETILSEIDGGNYKHPFTFDTVDGEFCLLLRSGHVMDHIAHTSSLRDKWNGLPVKSDRVFKAQLKHAG
VVVGEKEVERRIYTRRVAHLVPISLERLAAFGLYVSVREDLASDALQGAAA
>Mature_930_residues
ASIDELKQRIDLHDLADRLGMKRGRGGDRALYHSPQHEDKSPSLSIFVNHPKHGTGWRDHSADTGGSCVDLVMYARGGSV
ADAVRYLHDAYGIPTTAPAAAGERREKSKIDYIADKCLAERDGARAYLAGRGISAAAIDAAIAARSLGFNTWTSSKVAAG
EVGHAGPAAAFVVRSPHDGRVVAVDMRYLDPAINGGVKTQTQGDKAGFGWTADPRRLAKAKRVYVVESAINALSIDSCAL
PGAAALALRGLANVGDIDFTFLRGRQVVICLDNDEPFGDGHPRAGHRPGPEAAWALYERLTSLNISAVLVDQAEWLADLG
DGEAKAKPINDVNDYLQVRGADQLGRALDQLEPWLIAGLAGDATRRGRPRIFLPSHDFAQYWRFRVRPDFTSYITKMDRN
EESGVETPVMTDLCGFRIAGISRVSVASATATMTGDDDQAPTVYFAVSVQAPRHGPQLIRRVMLDDQLHNVDQWGKFGPI
WAPAPFKRMVNILERGADLGARQAANFVGLAWRDGRLIVNEGPDCYFTEADKQCPYHNLTFPSGPIGDARRVITAYQATF
KQNAATIPLVWALGGHLKALLGFWPHMTVQANKGAGKSTLIKRLERSLAFTMFSGQSLQTEFRLLTSISHTSHPVGWEEL
SARRQDVIDKAVGLLQENYQYTVTRRGTDMTEYLLCAPVMLAGEDVPVRSLLGKLVRTTLTGKRGPLLPDDLPRFPVRQW
LEFLAGLDKRSVLDQYGKLRDKALANCRASGEDDGAKRMAGNYAALALAWRYLCDFAGMDPSEGDFPRDLLTEMNGHVAE
TSADREPWVWIMETILSEIDGGNYKHPFTFDTVDGEFCLLLRSGHVMDHIAHTSSLRDKWNGLPVKSDRVFKAQLKHAGV
VVGEKEVERRIYTRRVAHLVPISLERLAAFGLYVSVREDLASDALQGAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102082; Mature: 101951

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIDELKQRIDLHDLADRLGMKRGRGGDRALYHSPQHEDKSPSLSIFVNHPKHGTGWRD
CCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
HSADTGGSCVDLVMYARGGSVADAVRYLHDAYGIPTTAPAAAGERREKSKIDYIADKCLA
CCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERDGARAYLAGRGISAAAIDAAIAARSLGFNTWTSSKVAAGEVGHAGPAAAFVVRSPHDG
HCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
RVVAVDMRYLDPAINGGVKTQTQGDKAGFGWTADPRRLAKAKRVYVVESAINALSIDSCA
CEEEEEHHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEHHHHHHCCCCCCC
LPGAAALALRGLANVGDIDFTFLRGRQVVICLDNDEPFGDGHPRAGHRPGPEAAWALYER
CCHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
LTSLNISAVLVDQAEWLADLGDGEAKAKPINDVNDYLQVRGADQLGRALDQLEPWLIAGL
HHHCCCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEEC
AGDATRRGRPRIFLPSHDFAQYWRFRVRPDFTSYITKMDRNEESGVETPVMTDLCGFRIA
CCCCCCCCCCEEECCCCHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
GISRVSVASATATMTGDDDQAPTVYFAVSVQAPRHGPQLIRRVMLDDQLHNVDQWGKFGP
CCCCEEEHHCEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHCCCCCC
IWAPAPFKRMVNILERGADLGARQAANFVGLAWRDGRLIVNEGPDCYFTEADKQCPYHNL
CCCCHHHHHHHHHHHCCCCCCHHHHCCEEEEEEECCEEEEECCCCEEEECCCCCCCCCCC
TFPSGPIGDARRVITAYQATFKQNAATIPLVWALGGHLKALLGFWPHMTVQANKGAGKST
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
LIKRLERSLAFTMFSGQSLQTEFRLLTSISHTSHPVGWEELSARRQDVIDKAVGLLQENY
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
QYTVTRRGTDMTEYLLCAPVMLAGEDVPVRSLLGKLVRTTLTGKRGPLLPDDLPRFPVRQ
EEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
WLEFLAGLDKRSVLDQYGKLRDKALANCRASGEDDGAKRMAGNYAALALAWRYLCDFAGM
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCC
DPSEGDFPRDLLTEMNGHVAETSADREPWVWIMETILSEIDGGNYKHPFTFDTVDGEFCL
CCCCCCCCHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEE
LLRSGHVMDHIAHTSSLRDKWNGLPVKSDRVFKAQLKHAGVVVGEKEVERRIYTRRVAHL
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEECHHHHHHHHHHHHHHHH
VPISLERLAAFGLYVSVREDLASDALQGAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASIDELKQRIDLHDLADRLGMKRGRGGDRALYHSPQHEDKSPSLSIFVNHPKHGTGWRD
CCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
HSADTGGSCVDLVMYARGGSVADAVRYLHDAYGIPTTAPAAAGERREKSKIDYIADKCLA
CCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERDGARAYLAGRGISAAAIDAAIAARSLGFNTWTSSKVAAGEVGHAGPAAAFVVRSPHDG
HCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
RVVAVDMRYLDPAINGGVKTQTQGDKAGFGWTADPRRLAKAKRVYVVESAINALSIDSCA
CEEEEEHHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEHHHHHHCCCCCCC
LPGAAALALRGLANVGDIDFTFLRGRQVVICLDNDEPFGDGHPRAGHRPGPEAAWALYER
CCHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
LTSLNISAVLVDQAEWLADLGDGEAKAKPINDVNDYLQVRGADQLGRALDQLEPWLIAGL
HHHCCCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEEC
AGDATRRGRPRIFLPSHDFAQYWRFRVRPDFTSYITKMDRNEESGVETPVMTDLCGFRIA
CCCCCCCCCCEEECCCCHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
GISRVSVASATATMTGDDDQAPTVYFAVSVQAPRHGPQLIRRVMLDDQLHNVDQWGKFGP
CCCCEEEHHCEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHCCCCCC
IWAPAPFKRMVNILERGADLGARQAANFVGLAWRDGRLIVNEGPDCYFTEADKQCPYHNL
CCCCHHHHHHHHHHHCCCCCCHHHHCCEEEEEEECCEEEEECCCCEEEECCCCCCCCCCC
TFPSGPIGDARRVITAYQATFKQNAATIPLVWALGGHLKALLGFWPHMTVQANKGAGKST
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
LIKRLERSLAFTMFSGQSLQTEFRLLTSISHTSHPVGWEELSARRQDVIDKAVGLLQENY
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
QYTVTRRGTDMTEYLLCAPVMLAGEDVPVRSLLGKLVRTTLTGKRGPLLPDDLPRFPVRQ
EEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
WLEFLAGLDKRSVLDQYGKLRDKALANCRASGEDDGAKRMAGNYAALALAWRYLCDFAGM
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCC
DPSEGDFPRDLLTEMNGHVAETSADREPWVWIMETILSEIDGGNYKHPFTFDTVDGEFCL
CCCCCCCCHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEE
LLRSGHVMDHIAHTSSLRDKWNGLPVKSDRVFKAQLKHAGVVVGEKEVERRIYTRRVAHL
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEECHHHHHHHHHHHHHHHH
VPISLERLAAFGLYVSVREDLASDALQGAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA