Click here to switch to the map view.

The map label for this gene is zntR [H]

Identifier: 238025766

GI number: 238025766

Start: 95780

End: 96211

Strand: Reverse

Name: zntR [H]

Synonym: bglu_1g00900

Alternate gene names: 238025766

Gene position: 96211-95780 (Counterclockwise)

Preceding gene: 238025771

Following gene: 238025765

Centisome position: 2.46

GC content: 68.06

Gene sequence:

>432_bases
ATGAAGATCGGCGAACTCGCGAAAGCCGCCCGCTGCACGCCCGAGACCGTCCGTTTCTACGAGAAGGAGGGCCTGATGCC
GGATGCGGAGCGCACCGACGCGAACTACCGGCGCTACACCGAGGTCCACGTCGAGCGCCTGCGCTTCATCCGCAACTGCC
GCGCGCTCGACATGACGCACGACGAGATCCGCGCGCTGCTGCGCCTCACCGACGACCCGTCCGACCGCTGCGATTCGATC
AACGCGCTGCTCGACGAGCACATCGGCCATGTGAACGCACGGCTCGTCGAACTGCAGCACCTGAAGGCGCAGCTCTCGGA
CCTGCGCGACCGGTGCCAGGGCGAGCACACGGTAGAGGACTGCGGGATCGTGCACGGCCTGGCCACGATGGAAACGCCCG
AGGCGCCGGCCAAGCGCACCCACCTCGGCTGA

Upstream 100 bases:

>100_bases
TTCGTTCACCTGGGCCATGACCCTCTCCTGGTTGCTGGACGGTGTACAGTTAACACCCTGAAGCCACTTCAAGGTCAACC
GCTTCCGACAGGAGATTGCA

Downstream 100 bases:

>100_bases
GCCGGCGGCCCGGTACGGTCGCGGCCGCGTTGTGCCGCGCCACCTCAGGTCATAAAATAACCAGTCATTTTTTGACGATG
GCCGTTACGCGGGACACATG

Product: MerR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKIGELAKAARCTPETVRFYEKEGLMPDAERTDANYRRYTEVHVERLRFIRNCRALDMTHDEIRALLRLTDDPSDRCDSI
NALLDEHIGHVNARLVELQHLKAQLSDLRDRCQGEHTVEDCGIVHGLATMETPEAPAKRTHLG

Sequences:

>Translated_143_residues
MKIGELAKAARCTPETVRFYEKEGLMPDAERTDANYRRYTEVHVERLRFIRNCRALDMTHDEIRALLRLTDDPSDRCDSI
NALLDEHIGHVNARLVELQHLKAQLSDLRDRCQGEHTVEDCGIVHGLATMETPEAPAKRTHLG
>Mature_143_residues
MKIGELAKAARCTPETVRFYEKEGLMPDAERTDANYRRYTEVHVERLRFIRNCRALDMTHDEIRALLRLTDDPSDRCDSI
NALLDEHIGHVNARLVELQHLKAQLSDLRDRCQGEHTVEDCGIVHGLATMETPEAPAKRTHLG

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=128, Percent_Identity=39.84375, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI1786695, Length=128, Percent_Identity=29.6875, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16374; Mature: 16374

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGELAKAARCTPETVRFYEKEGLMPDAERTDANYRRYTEVHVERLRFIRNCRALDMTH
CCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
DEIRALLRLTDDPSDRCDSINALLDEHIGHVNARLVELQHLKAQLSDLRDRCQGEHTVED
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
CGIVHGLATMETPEAPAKRTHLG
HHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIGELAKAARCTPETVRFYEKEGLMPDAERTDANYRRYTEVHVERLRFIRNCRALDMTH
CCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
DEIRALLRLTDDPSDRCDSINALLDEHIGHVNARLVELQHLKAQLSDLRDRCQGEHTVED
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
CGIVHGLATMETPEAPAKRTHLG
HHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]