| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025705
Identifier: 238025705
GI number: 238025705
Start: 27206
End: 27982
Strand: Reverse
Name: 238025705
Synonym: bglu_1g00270
Alternate gene names: NA
Gene position: 27982-27206 (Counterclockwise)
Preceding gene: 238025706
Following gene: 238025703
Centisome position: 0.72
GC content: 70.91
Gene sequence:
>777_bases GTGCCGATGAGGTTCTGGATGCGATTGCGCGCGAGCCTGCCGTGGGTCGTGACGGGGGCGCTCGCGGTGGCCGTGGTGGT GGTCGCGCTGCTGCCGGCGGCCTGGGTGACGCCGCAGTTCGCGCGCGCGAGCGGCGGCCACCTCAACCTGGTCGACCCCG ACGGCTCGCTCTGGCACGGCTCGGCCACCCTGCTGCTGGCGCCGGGGCACGACCTCAGCGCCTCCACGCTGCTGCCGGGC CGGATCGAATGGCAGACTTCGTTCTGGTCCCTGTTCACGGGCCACCTGCGCATGAAGATGCGCCAGACCGAAGCCATGCC CGACCCGATCACCGTCGATGCGACGCTGCGCGGCGCGCTGGTGTCGTCCGGCGCGATGGCGGTGCCGGCCTCGCTGCTGG CCGGGCTCGGCACGCCGTTCAACACGCTCGACCTGCATGGCGACGTGCGGATCGGCTGGAGCGACTGGCGCCTGTTCGGC CAGCAGGTGTTCGGGCAGGTCACGCTGACCATCACCGACATGAGCTCGCGGCTCTCGATCGTCAAGCCGCTCGGATCCTA TCGCGCGGTCTGGCAGGCCCAGGGCACGAACTCGACACTCGATCTGTCGACGCTGAAGGGGCCGCTGTTCCTGCAGGGGC ACGGCAGCTTCGGGAGCGGCGCTTCGTCGTTCAACGGCACCGCGCGCGCCGACGACGCGCAGCGCGAGAACCTGCTCGGC CTGTTGAACCTGCTCGGCCGCCCGATCGGGCCGGGCCTCGTGTCGTTGACGTTCTGA
Upstream 100 bases:
>100_bases GGCCAGGTGGACCTGAGCGCCGTGATGCAGCCGGCGGGCGCCAAGTGAGCGGCGCCGCGCGAAACACCGACGTGGCCGCC GTCGCGCGGCCCGGGGCGGG
Downstream 100 bases:
>100_bases GGCTTCGCGAGGCGCCGGCGCCCCGCTCGGGCGCCGCGCCGAGGTGACCGGACGAATGCCGGCGCGGGCCCGGCAAGCGC GCACCAGACCGGCGGCCGGC
Product: general secretory pathway protein N
Products: NA
Alternate protein names: General Secretory Pathway Protein N; Type II Secretion System Protein N; General Secretion Pathway Protein N
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPMRFWMRLRASLPWVVTGALAVAVVVVALLPAAWVTPQFARASGGHLNLVDPDGSLWHGSATLLLAPGHDLSASTLLPG RIEWQTSFWSLFTGHLRMKMRQTEAMPDPITVDATLRGALVSSGAMAVPASLLAGLGTPFNTLDLHGDVRIGWSDWRLFG QQVFGQVTLTITDMSSRLSIVKPLGSYRAVWQAQGTNSTLDLSTLKGPLFLQGHGSFGSGASSFNGTARADDAQRENLLG LLNLLGRPIGPGLVSLTF
Sequences:
>Translated_258_residues MPMRFWMRLRASLPWVVTGALAVAVVVVALLPAAWVTPQFARASGGHLNLVDPDGSLWHGSATLLLAPGHDLSASTLLPG RIEWQTSFWSLFTGHLRMKMRQTEAMPDPITVDATLRGALVSSGAMAVPASLLAGLGTPFNTLDLHGDVRIGWSDWRLFG QQVFGQVTLTITDMSSRLSIVKPLGSYRAVWQAQGTNSTLDLSTLKGPLFLQGHGSFGSGASSFNGTARADDAQRENLLG LLNLLGRPIGPGLVSLTF >Mature_257_residues PMRFWMRLRASLPWVVTGALAVAVVVVALLPAAWVTPQFARASGGHLNLVDPDGSLWHGSATLLLAPGHDLSASTLLPGR IEWQTSFWSLFTGHLRMKMRQTEAMPDPITVDATLRGALVSSGAMAVPASLLAGLGTPFNTLDLHGDVRIGWSDWRLFGQ QVFGQVTLTITDMSSRLSIVKPLGSYRAVWQAQGTNSTLDLSTLKGPLFLQGHGSFGSGASSFNGTARADDAQRENLLGL LNLLGRPIGPGLVSLTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27555; Mature: 27424
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRFWMRLRASLPWVVTGALAVAVVVVALLPAAWVTPQFARASGGHLNLVDPDGSLWHG CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCEEEC SATLLLAPGHDLSASTLLPGRIEWQTSFWSLFTGHLRMKMRQTEAMPDPITVDATLRGAL CEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH VSSGAMAVPASLLAGLGTPFNTLDLHGDVRIGWSDWRLFGQQVFGQVTLTITDMSSRLSI HCCCCHHHHHHHHHHCCCCCCEEEECCCEEECHHHHHHHHHHHHCEEEEEEECCCCHHHH VKPLGSYRAVWQAQGTNSTLDLSTLKGPLFLQGHGSFGSGASSFNGTARADDAQRENLLG HHCCCCHHEEEEECCCCCEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH LLNLLGRPIGPGLVSLTF HHHHHCCCCCCCEEEEEC >Mature Secondary Structure PMRFWMRLRASLPWVVTGALAVAVVVVALLPAAWVTPQFARASGGHLNLVDPDGSLWHG CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCEEEC SATLLLAPGHDLSASTLLPGRIEWQTSFWSLFTGHLRMKMRQTEAMPDPITVDATLRGAL CEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH VSSGAMAVPASLLAGLGTPFNTLDLHGDVRIGWSDWRLFGQQVFGQVTLTITDMSSRLSI HCCCCHHHHHHHHHHCCCCCCEEEECCCEEECHHHHHHHHHHHHCEEEEEEECCCCHHHH VKPLGSYRAVWQAQGTNSTLDLSTLKGPLFLQGHGSFGSGASSFNGTARADDAQRENLLG HHCCCCHHEEEEECCCCCEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH LLNLLGRPIGPGLVSLTF HHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA