| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is wbbL [H]
Identifier: 238025564
GI number: 238025564
Start: 2804404
End: 2805486
Strand: Direct
Name: wbbL [H]
Synonym: bglu_2g22610
Alternate gene names: 238025564
Gene position: 2804404-2805486 (Clockwise)
Preceding gene: 238025563
Following gene: 238025566
Centisome position: 99.19
GC content: 74.88
Gene sequence:
>1083_bases GTGAGCGGCGGCCACGACGACGGGCTCGGCGCGGGCGCCACGCGGCGCCCGTCGCCGCACGAGCACGCGCTGGCCCGGCG CGCGCTCTCGATCCTGATCGTCGCGCACGACTGCGCCGAGCAGATCGACCGCCAGCTCGCGCTGCTGAGCGTGGCGGCGC GCTACCGCGACTGGCAGGTGATCGTGGTCGACAACGCGTCCACCGACGGCACGCCCGATCTGGTCGCGGCCAGCTACCCG TGGGCGCGGCTGATCCGTCTGCCGGTGAACATCGGCTACGCGGCGGCCTGCAACCTCGCGGCGCAGGAAGCCTACGGCGC CCTGCTGCTGCTGATGCATCCGGACACGCACGCGCAGCCCGCGATGATCGCGCGCGCCGCCGCGCGCATGCTCGTCAATC CGCAGGTAGGCATCGCCGGCGGCCGGCTGGTGGACGCGGCCGGCAACGACATGCCCAGCTCGCACCGGTTCCCGAGCGCG CTGGGCGACGCGTTCGCCTGGCGCGGCCCTTTCGGGCGCGCCGCGGCCACGCGGCGCGCGCAGCTCGATCCCGACCTGCA GCCGCGCCGGCGGCCGCGCACGGTCGACTGGGTGTCCGATGCCTTCGCGATGGTGCGCCACGACGTGTTCCGCTATCTGA ACGGCTTCGACACGCGCTTTTTCATGTACTGCGAGGATATCGACCTGTGCCGGCGCGCCGGCGCGGCGGGCTTCGAGGTG ATGTACTGGCCGGACGTGCGCGCGCGCTGCGTGAGCGGCGGCATGGCGCAGATGGGCGGCGGGATCGGCCAGGCCGCCCG CGACGCGGCCCGGCGCGAGCGCTGGCAGATCCGCAGCCGCCTGCTGTACCTGCACAAGCATCAGGGCTCCACCAGCGCCT GGCTCGCGAGCCGCATCGAGACGGCCTGGCTCACGCTGGCGGGCTGGAGTTATCGCTGCGGCGACGCGCTGCAGCCGGCC GAGGCCGGCGAGCGCGAGGCGGCGAACGGCCATCGCGATGCGTTCGCGCGCCGGGCCCAGCTGGGCGATGCCTGGCGCGC CACCGACGGCGGCCGCGAATCGCCGCCGGGCCCGTGGCGCTGA
Upstream 100 bases:
>100_bases CGCCGTCATGCGGCCGCCACTCGTCCGCGACGCGCACCTCGCCATCTACCCGGGGAAGTCCGATGACGAGGCGGGACAGG CGCGATCGGCCGGGTCCGTC
Downstream 100 bases:
>100_bases GCGCCAGGCCCGCTCCGGCCGCGCGCACCGCTGCATGCCGCCGCGCCGGGCCGCCCCTCGCGCCTTACTCGGGCGAGTCG AGCCGCACGCAGCGGTAGCC
Product: group 2 family glycosyl transferase
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSGGHDDGLGAGATRRPSPHEHALARRALSILIVAHDCAEQIDRQLALLSVAARYRDWQVIVVDNASTDGTPDLVAASYP WARLIRLPVNIGYAAACNLAAQEAYGALLLLMHPDTHAQPAMIARAAARMLVNPQVGIAGGRLVDAAGNDMPSSHRFPSA LGDAFAWRGPFGRAAATRRAQLDPDLQPRRRPRTVDWVSDAFAMVRHDVFRYLNGFDTRFFMYCEDIDLCRRAGAAGFEV MYWPDVRARCVSGGMAQMGGGIGQAARDAARRERWQIRSRLLYLHKHQGSTSAWLASRIETAWLTLAGWSYRCGDALQPA EAGEREAANGHRDAFARRAQLGDAWRATDGGRESPPGPWR
Sequences:
>Translated_360_residues MSGGHDDGLGAGATRRPSPHEHALARRALSILIVAHDCAEQIDRQLALLSVAARYRDWQVIVVDNASTDGTPDLVAASYP WARLIRLPVNIGYAAACNLAAQEAYGALLLLMHPDTHAQPAMIARAAARMLVNPQVGIAGGRLVDAAGNDMPSSHRFPSA LGDAFAWRGPFGRAAATRRAQLDPDLQPRRRPRTVDWVSDAFAMVRHDVFRYLNGFDTRFFMYCEDIDLCRRAGAAGFEV MYWPDVRARCVSGGMAQMGGGIGQAARDAARRERWQIRSRLLYLHKHQGSTSAWLASRIETAWLTLAGWSYRCGDALQPA EAGEREAANGHRDAFARRAQLGDAWRATDGGRESPPGPWR >Mature_359_residues SGGHDDGLGAGATRRPSPHEHALARRALSILIVAHDCAEQIDRQLALLSVAARYRDWQVIVVDNASTDGTPDLVAASYPW ARLIRLPVNIGYAAACNLAAQEAYGALLLLMHPDTHAQPAMIARAAARMLVNPQVGIAGGRLVDAAGNDMPSSHRFPSAL GDAFAWRGPFGRAAATRRAQLDPDLQPRRRPRTVDWVSDAFAMVRHDVFRYLNGFDTRFFMYCEDIDLCRRAGAAGFEVM YWPDVRARCVSGGMAQMGGGIGQAARDAARRERWQIRSRLLYLHKHQGSTSAWLASRIETAWLTLAGWSYRCGDALQPAE AGEREAANGHRDAFARRAQLGDAWRATDGGRESPPGPWR
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 39461; Mature: 39330
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGHDDGLGAGATRRPSPHEHALARRALSILIVAHDCAEQIDRQLALLSVAARYRDWQV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCEE IVVDNASTDGTPDLVAASYPWARLIRLPVNIGYAAACNLAAQEAYGALLLLMHPDTHAQP EEEECCCCCCCCCCEECCCCHHHHEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCH AMIARAAARMLVNPQVGIAGGRLVDAAGNDMPSSHRFPSALGDAFAWRGPFGRAAATRRA HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHC QLDPDLQPRRRPRTVDWVSDAFAMVRHDVFRYLNGFDTRFFMYCEDIDLCRRAGAAGFEV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCEEE MYWPDVRARCVSGGMAQMGGGIGQAARDAARRERWQIRSRLLYLHKHQGSTSAWLASRIE EECCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TAWLTLAGWSYRCGDALQPAEAGEREAANGHRDAFARRAQLGDAWRATDGGRESPPGPWR HHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGGHDDGLGAGATRRPSPHEHALARRALSILIVAHDCAEQIDRQLALLSVAARYRDWQV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCEE IVVDNASTDGTPDLVAASYPWARLIRLPVNIGYAAACNLAAQEAYGALLLLMHPDTHAQP EEEECCCCCCCCCCEECCCCHHHHEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCH AMIARAAARMLVNPQVGIAGGRLVDAAGNDMPSSHRFPSALGDAFAWRGPFGRAAATRRA HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHC QLDPDLQPRRRPRTVDWVSDAFAMVRHDVFRYLNGFDTRFFMYCEDIDLCRRAGAAGFEV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCEEE MYWPDVRARCVSGGMAQMGGGIGQAARDAARRERWQIRSRLLYLHKHQGSTSAWLASRIE EECCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TAWLTLAGWSYRCGDALQPAEAGEREAANGHRDAFARRAQLGDAWRATDGGRESPPGPWR HHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]