Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is dedA [H]

Identifier: 238025510

GI number: 238025510

Start: 2738079

End: 2739068

Strand: Direct

Name: dedA [H]

Synonym: bglu_2g22060

Alternate gene names: 238025510

Gene position: 2738079-2739068 (Clockwise)

Preceding gene: 238025509

Following gene: 238025513

Centisome position: 96.84

GC content: 72.42

Gene sequence:

>990_bases
ATGCTGCATGACCTCATCGCCCGATACGGGCCGTTGATCGTGTTCGTCAACGTGCTGGCCGCCGCGCTCGGCTTGCCCGT
GCCGGCAATGCCCACGCTCGTCCTGTTCGGCGCGATGGCCACCCTGCATCCCGAGGTGTTCGGCATGCAACTGGTGCCGG
TGCTGCTGCTGTCGGTGGCGGCGGCGCTGCTCGGCGACTCGGCTTGGTACGCGGCGGGGCGCCGCTTCGGCGGCAAGACG
CTGAGGACGATCTGCCGGCTGTCGCTATCGCGCGACAGTTGCGTGAAAAAAACCGAGCAGTTCTTCGGTCGCTGGGGCGT
GCGCGTGCTCGCGATCGCGCGCTTCGTGCCGGGGCTGTCGCTGGTGTCGGTGCCGCTGGCCGGCGCGCTCGGCACGCGCT
ATCGCACCTTCGTCGGCTACGACGCGCTCGGCGCGCTGCTGTGGGCCGCGGCCGGGCTGCTGATCGGGCTCGTGTTCGCC
GAGCAGATCGACTGGCTGTTGGCGGCCGCGAGCCGGCTCGGCCACGCCGCGCTGGCCGTCGTCGCCGTGCTGCTCGCGCT
CTACGCGAGCGTGCGCTGGATGCGCCGCCGCGCGCTGCTGCGCCAGCTCGTCCACGCGCGCATCGGCGTCGACGAGCTCG
ATCGACTGCTGCATGCCGATGCGGGGCCGCCGCCCGTCGTGATCGACGTGCGGACCGCCGAGCATCGGCGCCTCGATCCG
TTCTCGATTCCCGGCGCGGTGTTCGCCGACGAGCGGCACATCCGCGATCTGGCCGCCCGCTATCCGCTGTCGCAAAGGTT
CGTGACCTACTGCGCCTGCCCGAACGAGGTGTCGGCGGTGCTGATGGCCAGACGGCTGTCGGACGCCGGCTTCACCGACG
CGCTCGCGCTGCGCGGCGGCCTCGACGCCTGGCGCGACTCCGGCCGGCCGCTGGCCGGCATCGTGCTGGCCGAACCGGTC
CCGGCCGCGCCGGCGCCGAAGACGGCCTGA

Upstream 100 bases:

>100_bases
TCAGCCGACGCTCCCTTGACCCGAAAGTGATCGATAATCGGTCCCGTCCGATTCGCGTGTCCGACTCACGCCCGCTGCTT
TCGCATTTCACCCATCGATC

Downstream 100 bases:

>100_bases
GCCGCGCGGCCCGAGGCCCGCGGGCCCGCCTCTGCGCCGACGCTCAGAACACCGTCATCGGCAGATTGACCACCAGCCGG
TATTCCTGATTGGTGCTGTC

Product: Rhodanese domain-containing protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLHDLIARYGPLIVFVNVLAAALGLPVPAMPTLVLFGAMATLHPEVFGMQLVPVLLLSVAAALLGDSAWYAAGRRFGGKT
LRTICRLSLSRDSCVKKTEQFFGRWGVRVLAIARFVPGLSLVSVPLAGALGTRYRTFVGYDALGALLWAAAGLLIGLVFA
EQIDWLLAAASRLGHAALAVVAVLLALYASVRWMRRRALLRQLVHARIGVDELDRLLHADAGPPPVVIDVRTAEHRRLDP
FSIPGAVFADERHIRDLAARYPLSQRFVTYCACPNEVSAVLMARRLSDAGFTDALALRGGLDAWRDSGRPLAGIVLAEPV
PAAPAPKTA

Sequences:

>Translated_329_residues
MLHDLIARYGPLIVFVNVLAAALGLPVPAMPTLVLFGAMATLHPEVFGMQLVPVLLLSVAAALLGDSAWYAAGRRFGGKT
LRTICRLSLSRDSCVKKTEQFFGRWGVRVLAIARFVPGLSLVSVPLAGALGTRYRTFVGYDALGALLWAAAGLLIGLVFA
EQIDWLLAAASRLGHAALAVVAVLLALYASVRWMRRRALLRQLVHARIGVDELDRLLHADAGPPPVVIDVRTAEHRRLDP
FSIPGAVFADERHIRDLAARYPLSQRFVTYCACPNEVSAVLMARRLSDAGFTDALALRGGLDAWRDSGRPLAGIVLAEPV
PAAPAPKTA
>Mature_329_residues
MLHDLIARYGPLIVFVNVLAAALGLPVPAMPTLVLFGAMATLHPEVFGMQLVPVLLLSVAAALLGDSAWYAAGRRFGGKT
LRTICRLSLSRDSCVKKTEQFFGRWGVRVLAIARFVPGLSLVSVPLAGALGTRYRTFVGYDALGALLWAAAGLLIGLVFA
EQIDWLLAAASRLGHAALAVVAVLLALYASVRWMRRRALLRQLVHARIGVDELDRLLHADAGPPPVVIDVRTAEHRRLDP
FSIPGAVFADERHIRDLAARYPLSQRFVTYCACPNEVSAVLMARRLSDAGFTDALALRGGLDAWRDSGRPLAGIVLAEPV
PAAPAPKTA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=154, Percent_Identity=33.7662337662338, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 35345; Mature: 35345

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHDLIARYGPLIVFVNVLAAALGLPVPAMPTLVLFGAMATLHPEVFGMQLVPVLLLSVA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLGDSAWYAAGRRFGGKTLRTICRLSLSRDSCVKKTEQFFGRWGVRVLAIARFVPGLS
HHHHCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVSVPLAGALGTRYRTFVGYDALGALLWAAAGLLIGLVFAEQIDWLLAAASRLGHAALAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVLLALYASVRWMRRRALLRQLVHARIGVDELDRLLHADAGPPPVVIDVRTAEHRRLDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
FSIPGAVFADERHIRDLAARYPLSQRFVTYCACPNEVSAVLMARRLSDAGFTDALALRGG
CCCCCCHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCC
LDAWRDSGRPLAGIVLAEPVPAAPAPKTA
CHHHHCCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLHDLIARYGPLIVFVNVLAAALGLPVPAMPTLVLFGAMATLHPEVFGMQLVPVLLLSVA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLGDSAWYAAGRRFGGKTLRTICRLSLSRDSCVKKTEQFFGRWGVRVLAIARFVPGLS
HHHHCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVSVPLAGALGTRYRTFVGYDALGALLWAAAGLLIGLVFAEQIDWLLAAASRLGHAALAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVLLALYASVRWMRRRALLRQLVHARIGVDELDRLLHADAGPPPVVIDVRTAEHRRLDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
FSIPGAVFADERHIRDLAARYPLSQRFVTYCACPNEVSAVLMARRLSDAGFTDALALRGG
CCCCCCHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCC
LDAWRDSGRPLAGIVLAEPVPAAPAPKTA
CHHHHCCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]