| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025486
Identifier: 238025486
GI number: 238025486
Start: 2705993
End: 2707042
Strand: Direct
Name: 238025486
Synonym: bglu_2g21800
Alternate gene names: NA
Gene position: 2705993-2707042 (Clockwise)
Preceding gene: 238025485
Following gene: 238025487
Centisome position: 95.71
GC content: 64.95
Gene sequence:
>1050_bases ATGAGCACGTCCGCCCAAAAATCCCGTCCGACCGCCGCAGCCGCCGACGCGCAGGAATCCAGCGGCCCACTTGTCGGCAA GACGAATTCCCCGTACGTACGGGGAATTCGATTCGGTGCTGCCGAACAGGCGCTGGCAGACGTTCTCGGCGTGTCTGTCT CCGGCGGGACGGAAGCTCGCATCAGCAGTGCAATTTCGAAGACGAATTCCGCGCTGCGACCGGTCATCGAGGCCGGGCTG ATGCTGCTCAGCATACGCTCCGAATGCGAGCACGGCGAGTTCGAAGCGCTACTCGAAAGCCACGGCATGCCCAGCCAACG CGCAAGCGAGGCGATGACGTACGCTCGGTTCGCCGCGTCGCTGTCGCCCGAGGATCGCGATCGCGTCATTGAACTGCCGA AAACCAAGGTGCTGGAGCTGGCTAAGGCAGACCCGGAAGTCCTGCAAGACCTGTTCGAAGACGACGCGAAGTTCGGCGAA CTGACAGCGTTGTCTGTGCGTGATCTGCGCGTCGCGCTGCGCGACGCCAACGCGAAGCGGGCCGACCTTTCCACCCGGAA CGAGAAGCTGGAGCGCGAGCGCGACCGCCTGCAGGACGAGTTGCGCGAGCTGCACGAAGGCCGCGTCAAGACCGGTGCCG ACGTGCCCGTCGTCGTCCAGAACATTCGTCTGGAGTGCGCGGCTTTGCACAAGAAAGCGCTGATGGCGGCCGAGGACATC GGCCAGCTCGGCCACGAGTTCCTGACGAAAGGACTGCCCGACGATTCCCAGTGGAACACCCCCGTCATGCGGCACCTGTA CGGCTCGCTCGCGGCACTGCATGCGGTCATTGGCGGGCAGATTGCCGACATGCACCGCAGCTTCGGCGCGCTGCTGGACG GCGAACCGTCCGTGCTCGACACGTTCTCGCCGGACGAGACCACGCGCTGCGCGCTCGAATACCGCGCGCTGATCCAGGAG CACGACCACGAAGCCAAGGCGCGCGAGTGGGAACGCGAAATGAACCGCCCACGCAAGGTAGGCCGGCCTCGCAACGCCCC GACGAAATAA
Upstream 100 bases:
>100_bases TGGTCTCACGCGTCATTCGTGGTGTCCAAAAAGCCAACTATGGCAAGGGGCACGATGTTGCGGTTGCCCTAGGCATGAAG AAGCCTGGGGAGGTGAATGC
Downstream 100 bases:
>100_bases TCCATCCATCCGACCGACTGCCGCCCGAACAGGTGCGATATGCGATCCGTACTCTTGAAATCCGACATCATGACCAGCCG AGTTCCGGCTGCGCTCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSTSAQKSRPTAAAADAQESSGPLVGKTNSPYVRGIRFGAAEQALADVLGVSVSGGTEARISSAISKTNSALRPVIEAGL MLLSIRSECEHGEFEALLESHGMPSQRASEAMTYARFAASLSPEDRDRVIELPKTKVLELAKADPEVLQDLFEDDAKFGE LTALSVRDLRVALRDANAKRADLSTRNEKLERERDRLQDELRELHEGRVKTGADVPVVVQNIRLECAALHKKALMAAEDI GQLGHEFLTKGLPDDSQWNTPVMRHLYGSLAALHAVIGGQIADMHRSFGALLDGEPSVLDTFSPDETTRCALEYRALIQE HDHEAKAREWEREMNRPRKVGRPRNAPTK
Sequences:
>Translated_349_residues MSTSAQKSRPTAAAADAQESSGPLVGKTNSPYVRGIRFGAAEQALADVLGVSVSGGTEARISSAISKTNSALRPVIEAGL MLLSIRSECEHGEFEALLESHGMPSQRASEAMTYARFAASLSPEDRDRVIELPKTKVLELAKADPEVLQDLFEDDAKFGE LTALSVRDLRVALRDANAKRADLSTRNEKLERERDRLQDELRELHEGRVKTGADVPVVVQNIRLECAALHKKALMAAEDI GQLGHEFLTKGLPDDSQWNTPVMRHLYGSLAALHAVIGGQIADMHRSFGALLDGEPSVLDTFSPDETTRCALEYRALIQE HDHEAKAREWEREMNRPRKVGRPRNAPTK >Mature_348_residues STSAQKSRPTAAAADAQESSGPLVGKTNSPYVRGIRFGAAEQALADVLGVSVSGGTEARISSAISKTNSALRPVIEAGLM LLSIRSECEHGEFEALLESHGMPSQRASEAMTYARFAASLSPEDRDRVIELPKTKVLELAKADPEVLQDLFEDDAKFGEL TALSVRDLRVALRDANAKRADLSTRNEKLERERDRLQDELRELHEGRVKTGADVPVVVQNIRLECAALHKKALMAAEDIG QLGHEFLTKGLPDDSQWNTPVMRHLYGSLAALHAVIGGQIADMHRSFGALLDGEPSVLDTFSPDETTRCALEYRALIQEH DHEAKAREWEREMNRPRKVGRPRNAPTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38305; Mature: 38173
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSAQKSRPTAAAADAQESSGPLVGKTNSPYVRGIRFGAAEQALADVLGVSVSGGTEAR CCCCCCCCCCCHHHCCCCCCCCCEECCCCCCHHHHEECCHHHHHHHHHHHCCCCCCCHHH ISSAISKTNSALRPVIEAGLMLLSIRSECEHGEFEALLESHGMPSQRASEAMTYARFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH LSPEDRDRVIELPKTKVLELAKADPEVLQDLFEDDAKFGELTALSVRDLRVALRDANAKR CCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCH ADLSTRNEKLERERDRLQDELRELHEGRVKTGADVPVVVQNIRLECAALHKKALMAAEDI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GQLGHEFLTKGLPDDSQWNTPVMRHLYGSLAALHAVIGGQIADMHRSFGALLDGEPSVLD HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEC TFSPDETTRCALEYRALIQEHDHEAKAREWEREMNRPRKVGRPRNAPTK CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCCCCCCC >Mature Secondary Structure STSAQKSRPTAAAADAQESSGPLVGKTNSPYVRGIRFGAAEQALADVLGVSVSGGTEAR CCCCCCCCCCHHHCCCCCCCCCEECCCCCCHHHHEECCHHHHHHHHHHHCCCCCCCHHH ISSAISKTNSALRPVIEAGLMLLSIRSECEHGEFEALLESHGMPSQRASEAMTYARFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH LSPEDRDRVIELPKTKVLELAKADPEVLQDLFEDDAKFGELTALSVRDLRVALRDANAKR CCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCH ADLSTRNEKLERERDRLQDELRELHEGRVKTGADVPVVVQNIRLECAALHKKALMAAEDI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GQLGHEFLTKGLPDDSQWNTPVMRHLYGSLAALHAVIGGQIADMHRSFGALLDGEPSVLD HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEC TFSPDETTRCALEYRALIQEHDHEAKAREWEREMNRPRKVGRPRNAPTK CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA