Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025168

Identifier: 238025168

GI number: 238025168

Start: 2294456

End: 2295097

Strand: Direct

Name: 238025168

Synonym: bglu_2g18390

Alternate gene names: NA

Gene position: 2294456-2295097 (Clockwise)

Preceding gene: 238025167

Following gene: 238025169

Centisome position: 81.15

GC content: 76.48

Gene sequence:

>642_bases
ATGAAGACCGACGATCTGATATCGATGCTGGCCACCGGCGTGACGCCCGCGGACCCGCGCCTGCCGGCCAGGCGCTTCGC
GACGGCGCTCGCGATCGGCGCGGCCGGCGCGCTGCTGCTGATGGCGGCCCTGCTCGGCATGCGCCGCGACCTCGCCGAGG
TCGCGCTCACGCCGCTGTTCTGGGCCAAGCTGGCGCTGCCGCTCGCACTCGCGATCGGCGCGCTCGCCACGCTCGCCAGG
CTCGCGCGCCCGGGTGCGCACGCCGGCCGCCCGAGCCTCCTGATCGCCGCGCCGGTGGCAGTGGCCTGGATCGCCGCGCT
GGCCGTGCTGGCCGCCGCGCCGGCGGGCGACCGGCTCGCGCTCGTGCTCGGCTCGACCTGGCAGGTCTGTCCGTGGCTGA
TCGCGCTGCTGTCGGTGCCGGGCTTGGTGGCGATCCTCGCCGCGCTCAGGCGCCTCGCGCCCACCCGCCTCGCGCTGGCT
GGCGGCGTGGGCGGCCTGCTGTCGGGCGCCGTCGCGACGCTCGTCTACTGCCTGCATTGCCCGGAGATGGGCGTGCCGTT
CTGGAGCGCCTGGTACCTGCTCGGCATGCTGGTGCCGAGCGCCGCGGGTGCCGCGATCGGGCCGCGCGTGCTGCGCTGGT
GA

Upstream 100 bases:

>100_bases
TGGCCGAAACGGCGCGGATGACCGGCCTGTCCGAATCGGCCGTGAAGATCGGAGTACACCGCGGCCTGAAGGCGCTGGCC
GCGAAGATTCGGGGAACACG

Downstream 100 bases:

>100_bases
CGGCCGGGCGCGCCGCCGCGCCGCGCGCTGCGACACGCCACCGAGCATTTGCCCGGCCGCTCGAACCGAGCAGGATTTGC
CGGGCGCCTGCCGCCGTTGA

Product: putative transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLFWAKLALPLALAIGALATLAR
LARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLALVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALA
GGVGGLLSGAVATLVYCLHCPEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW

Sequences:

>Translated_213_residues
MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLFWAKLALPLALAIGALATLAR
LARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLALVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALA
GGVGGLLSGAVATLVYCLHCPEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW
>Mature_213_residues
MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLFWAKLALPLALAIGALATLAR
LARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLALVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALA
GGVGGLLSGAVATLVYCLHCPEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW

Specific function: Unknown

COG id: COG4944

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21764; Mature: 21764

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLF
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAKLALPLALAIGALATLARLARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALAGGVGGLLSGAVATLVYCLHC
EEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
PEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW
CCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHCC
>Mature Secondary Structure
MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLF
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAKLALPLALAIGALATLARLARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALAGGVGGLLSGAVATLVYCLHC
EEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
PEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW
CCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA