| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is aldH [H]
Identifier: 238025160
GI number: 238025160
Start: 2284045
End: 2285631
Strand: Direct
Name: aldH [H]
Synonym: bglu_2g18260
Alternate gene names: 238025160
Gene position: 2284045-2285631 (Clockwise)
Preceding gene: 238025158
Following gene: 238025162
Centisome position: 80.78
GC content: 73.72
Gene sequence:
>1587_bases ATGACACACGAAATCACCGGAAACATGTTGCTGGGCGCGGCCTCGGTCCGCGGCACGCAGGGCGTGCTGCGCGCGTTCGC GCCGGCCACCGGCACCGAACTCGAGCCGGAATTCGGCGCCGGCGGCCCGGCCGACGTCGATCGCGCCTGCCGCCTCGCGG GCGAGGCGTTCGACGCCTTCCGCGCCGCGCCGCCGGACACGCGCGCGGCGCTGCTCGAGGCCATCGCCACCGGCATCGAG CAGCTCGGCGCGACGCTGATCGAGCGCCTGCACCTGGAAACGGCGCTGCCGGTCGCGCGCCTCGAAGGCGAGCGCGCGCG CACCTGCGGGCAGTTGCGCCTGTTCGCGCAACTGGTGCGCGACGGGCGCTGGAACGATGCCACGCTCGACTCGGCGCTGC CCGAGCGCAAGCCGCTGCCGCGCGCCGACCTGCGCGCGCGCAAGATCCCGATCGGCCCGGTGGCGGTGTTCGGCGCCAGC AACTTCCCGCTCGCGTTCTCGGTGGCGGGCGGCGACACGGCCTCCGCGCTCGCGGCCGGCTGCCCGGTGGTGGTGAAGGC GCACGAGGCGCATCTGGGCGGCTCGGAGCTGGTGGGCCGCGCGATCCAGCAGGCGGTGGCCGAGCTCGGCCTGCCCGAGG GCACGTTCTCCCTCGTGATCGGCAAGGGCAACGCGGTCGGCGAGGCGCTGGTGGCGCATCCGGCCATCAAGGCGGTCGGC TTCACCGGCTCGCGCCGCGGCGGCCTCGCGCTGTCGGCGATCGCCGCCGCGCGCGCCGAGCCGATTCCGGTTCACGCCGA AATGAGCAGCATCAACCCGGTGCTGGTGCTGCCGGCCGCGCTGAAGGCGCGCGGCGCGCAGCTCGCGCAGGGCTTCGTGG ATTCGCTGGTGCTCGGCGCCGGCCAGTTCTGCACGAATCCGGGCCTGGTACTTGCGATCGAAGGCCCGGAACTCGACGCG TTCGTGGCCGCCGCCTCGGCCGCGCTCGCCGGCAAGCCGTCGCAGGTCATGCTGACGGCCGGCATCGCCGCCACCTATCG CCGCCAGATCGACGAGCGCGCGCAGCAGCCGGACGTGGCGCGCGTGGCCGACGGCGTCGCCTCCGACAACGCCTGCGGCG CGCTGCCGGTGCTGTTCCGCGCCAAGGCGGCCGACTTCATGGCGAACCACGGCCTGGCCGAAGAGATCTTCGGGCCGGCC TCGATCGTGGTGGCATGCCGCGACGAGCAGGAGCTGCTGGGCGTGCTGGACGGCATCGAGGGCCAGCTCACGGCCACGCT GCTGCTGGATCCGGCCGACTACCCGGTCGCGAAGCGCGTGCTGCCGGTGCTCGAACGCAAGGTGGGCCGGATTCTCGCGA ACGGCTATCCGACCGGCGTCGAGGTCTGCCACGCGATGGTTCACGGCGGCCCGTTCCCTGCCACCTCCGATTCGCGCACG ACCTCGGTGGGCACCATGGCGATCGACCGCTTCCTGCGCCCGGTCTGCTACCAGGACCTGCCGGCCGAGCTGCTGCCCGA GGCGCTGCAAGACGCGAACCCGCTCGGCATCTGGCGCCTGCGCGACGGCGAACTCGTGCGGCGCTGA
Upstream 100 bases:
>100_bases CGGGGCCCATGCGTGCGTCATGCTTGCGAAAGCAATGCGTGAAGCACGATCCGCGCCGGCAGGCGCCACTCGATTCGCCG ATTCGCAGGAGAGATATCGC
Downstream 100 bases:
>100_bases GCGCCGCCGCCCGCTCGCGGGCGTATTGCTTGACCAAGGCCGGCGCGGTTTCGCGCCGGCCTTGGTGATTGGCGCGCCGG CAGTTCGGTGCAAGGCGGCG
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MTHEITGNMLLGAASVRGTQGVLRAFAPATGTELEPEFGAGGPADVDRACRLAGEAFDAFRAAPPDTRAALLEAIATGIE QLGATLIERLHLETALPVARLEGERARTCGQLRLFAQLVRDGRWNDATLDSALPERKPLPRADLRARKIPIGPVAVFGAS NFPLAFSVAGGDTASALAAGCPVVVKAHEAHLGGSELVGRAIQQAVAELGLPEGTFSLVIGKGNAVGEALVAHPAIKAVG FTGSRRGGLALSAIAAARAEPIPVHAEMSSINPVLVLPAALKARGAQLAQGFVDSLVLGAGQFCTNPGLVLAIEGPELDA FVAAASAALAGKPSQVMLTAGIAATYRRQIDERAQQPDVARVADGVASDNACGALPVLFRAKAADFMANHGLAEEIFGPA SIVVACRDEQELLGVLDGIEGQLTATLLLDPADYPVAKRVLPVLERKVGRILANGYPTGVEVCHAMVHGGPFPATSDSRT TSVGTMAIDRFLRPVCYQDLPAELLPEALQDANPLGIWRLRDGELVRR
Sequences:
>Translated_528_residues MTHEITGNMLLGAASVRGTQGVLRAFAPATGTELEPEFGAGGPADVDRACRLAGEAFDAFRAAPPDTRAALLEAIATGIE QLGATLIERLHLETALPVARLEGERARTCGQLRLFAQLVRDGRWNDATLDSALPERKPLPRADLRARKIPIGPVAVFGAS NFPLAFSVAGGDTASALAAGCPVVVKAHEAHLGGSELVGRAIQQAVAELGLPEGTFSLVIGKGNAVGEALVAHPAIKAVG FTGSRRGGLALSAIAAARAEPIPVHAEMSSINPVLVLPAALKARGAQLAQGFVDSLVLGAGQFCTNPGLVLAIEGPELDA FVAAASAALAGKPSQVMLTAGIAATYRRQIDERAQQPDVARVADGVASDNACGALPVLFRAKAADFMANHGLAEEIFGPA SIVVACRDEQELLGVLDGIEGQLTATLLLDPADYPVAKRVLPVLERKVGRILANGYPTGVEVCHAMVHGGPFPATSDSRT TSVGTMAIDRFLRPVCYQDLPAELLPEALQDANPLGIWRLRDGELVRR >Mature_527_residues THEITGNMLLGAASVRGTQGVLRAFAPATGTELEPEFGAGGPADVDRACRLAGEAFDAFRAAPPDTRAALLEAIATGIEQ LGATLIERLHLETALPVARLEGERARTCGQLRLFAQLVRDGRWNDATLDSALPERKPLPRADLRARKIPIGPVAVFGASN FPLAFSVAGGDTASALAAGCPVVVKAHEAHLGGSELVGRAIQQAVAELGLPEGTFSLVIGKGNAVGEALVAHPAIKAVGF TGSRRGGLALSAIAAARAEPIPVHAEMSSINPVLVLPAALKARGAQLAQGFVDSLVLGAGQFCTNPGLVLAIEGPELDAF VAAASAALAGKPSQVMLTAGIAATYRRQIDERAQQPDVARVADGVASDNACGALPVLFRAKAADFMANHGLAEEIFGPAS IVVACRDEQELLGVLDGIEGQLTATLLLDPADYPVAKRVLPVLERKVGRILANGYPTGVEVCHAMVHGGPFPATSDSRTT SVGTMAIDRFLRPVCYQDLPAELLPEALQDANPLGIWRLRDGELVRR
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI12007648, Length=433, Percent_Identity=23.5565819861432, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI153266822, Length=417, Percent_Identity=26.6187050359712, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87081896, Length=423, Percent_Identity=28.8416075650118, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1788042, Length=325, Percent_Identity=29.2307692307692, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786504, Length=316, Percent_Identity=27.2151898734177, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787684, Length=401, Percent_Identity=26.9326683291771, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787250, Length=267, Percent_Identity=28.8389513108614, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787558, Length=438, Percent_Identity=26.7123287671233, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17551164, Length=439, Percent_Identity=21.6400911161731, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI133930964, Length=272, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324950, Length=473, Percent_Identity=26.0042283298097, Blast_Score=71, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6320917, Length=429, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323821, Length=301, Percent_Identity=28.2392026578073, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323822, Length=302, Percent_Identity=29.4701986754967, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI281362580, Length=284, Percent_Identity=27.112676056338, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI62472918, Length=284, Percent_Identity=27.112676056338, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI62472926, Length=284, Percent_Identity=27.112676056338, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI62472936, Length=284, Percent_Identity=27.112676056338, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI21356737, Length=284, Percent_Identity=27.112676056338, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 54801; Mature: 54669
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHEITGNMLLGAASVRGTQGVLRAFAPATGTELEPEFGAGGPADVDRACRLAGEAFDAF CCCEECCCEEEECHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RAAPPDTRAALLEAIATGIEQLGATLIERLHLETALPVARLEGERARTCGQLRLFAQLVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHH DGRWNDATLDSALPERKPLPRADLRARKIPIGPVAVFGASNFPLAFSVAGGDTASALAAG CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHCC CPVVVKAHEAHLGGSELVGRAIQQAVAELGLPEGTFSLVIGKGNAVGEALVAHPAIKAVG CCEEEEECHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC FTGSRRGGLALSAIAAARAEPIPVHAEMSSINPVLVLPAALKARGAQLAQGFVDSLVLGA CCCCCCCCHHHHHHHHHCCCCCCEEEHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC GQFCTNPGLVLAIEGPELDAFVAAASAALAGKPSQVMLTAGIAATYRRQIDERAQQPDVA CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHH RVADGVASDNACGALPVLFRAKAADFMANHGLAEEIFGPASIVVACRDEQELLGVLDGIE HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCHHHHHHHHCCCC GQLTATLLLDPADYPVAKRVLPVLERKVGRILANGYPTGVEVCHAMVHGGPFPATSDSRT CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC TSVGTMAIDRFLRPVCYQDLPAELLPEALQDANPLGIWRLRDGELVRR CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHCC >Mature Secondary Structure THEITGNMLLGAASVRGTQGVLRAFAPATGTELEPEFGAGGPADVDRACRLAGEAFDAF CCEECCCEEEECHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RAAPPDTRAALLEAIATGIEQLGATLIERLHLETALPVARLEGERARTCGQLRLFAQLVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHH DGRWNDATLDSALPERKPLPRADLRARKIPIGPVAVFGASNFPLAFSVAGGDTASALAAG CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHCC CPVVVKAHEAHLGGSELVGRAIQQAVAELGLPEGTFSLVIGKGNAVGEALVAHPAIKAVG CCEEEEECHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC FTGSRRGGLALSAIAAARAEPIPVHAEMSSINPVLVLPAALKARGAQLAQGFVDSLVLGA CCCCCCCCHHHHHHHHHCCCCCCEEEHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC GQFCTNPGLVLAIEGPELDAFVAAASAALAGKPSQVMLTAGIAATYRRQIDERAQQPDVA CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHH RVADGVASDNACGALPVLFRAKAADFMANHGLAEEIFGPASIVVACRDEQELLGVLDGIE HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCHHHHHHHHCCCC GQLTATLLLDPADYPVAKRVLPVLERKVGRILANGYPTGVEVCHAMVHGGPFPATSDSRT CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC TSVGTMAIDRFLRPVCYQDLPAELLPEALQDANPLGIWRLRDGELVRR CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]