| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is glsA [H]
Identifier: 238025152
GI number: 238025152
Start: 2271725
End: 2272639
Strand: Direct
Name: glsA [H]
Synonym: bglu_2g18170
Alternate gene names: 238025152
Gene position: 2271725-2272639 (Clockwise)
Preceding gene: 238025149
Following gene: 238025158
Centisome position: 80.35
GC content: 68.63
Gene sequence:
>915_bases ATGAATTACCCATCGATACTCGAACGCATCCGCACCGAAATCACGCCGTGGATCGGCGCCGGCCGCGTGGCCGACTACAT CCCCGAGCTCGCGAAGGTTCCGGCCGAGCGCTTCGGCATCGCGATCGTCACGCTCGACGGCCAGACCCACACGGTGGGCG ACGCGCACGAGCGCTTCTCGATCCAGAGCATCTCGAAGCTGTTCGCCTGCACGCTCGCGTTCCAGCTGCTCGGCGACGAG CTCTGGCAGCGCGTGGGGCGCGAGCCGTCGGGCACCGCGTTCAATTCGCTGGTGCAGCTCGAAAGCGAGCGCGGCAAGCC GCGCAACCCGTTCATCAACGCCGGCGCACTGGTGGTCACCGACGTGCTGAGCCGCCGCTTCGTGCGCGCCGAGACAGCGC TCGTCGAATTCATCCGCCGGCTGATCGGCTCGAACGAGATCGACTACGACCTGCGCGTGGCGCAGTCCGAATGGCAGCAC GCCGAGCGCAACCGCGCGATGGCCCACTTCATGGCCAGCTTCGGCAACATGTGGATGCCGCCCGACATGGTGGTGGAAGC CTACTGCCGGCAGTGCGCGATCTCGATGAACTGCGTGGAGCTCGCGCAGGCCGCGCTGTTCCTCGCCAACGGCGGCGTGG CGCCCGTGACCGGCGAGCGCGTGGTGGACGCGAGTTCGGCCAAGCGGCTGTCCGCGCTGATGCTGACCTGCGGCACCTAC GACGCGGCCGGCGACTTCGTCTACCGCGTCGGGCTGCCGGCCAAGAGCGGCGTGGGCGGCGGCATCGTGGCGGTGCTGCC GGGCGAGATGGCCGTCTGCGTCTGGTCGCCGGGGCTCGACGCGAACGGCAATTCGCTGGCCGGCGTGCTGGCGCTGGAAT GGCTGACGAGCTACACGGAACGCTCGATCTTCTGA
Upstream 100 bases:
>100_bases GGCCGCCACGGCAGCGGCTCCGAGCTTGACGAATCGCGGCGCAAGCGGTTCCATACGGGCTCGCTGAATTCGGCGCCGCG CGCGCCGCCCGATCGCCGTC
Downstream 100 bases:
>100_bases GGCCGCGCGGGCCGCGGATTGCGGCGGCCCGCGCCCGGCTCCGGCGCCGCCCGCCGGCCTCGCCGTCAGGACGCGGCGCG CCGCCCCGGCCGCCGCGATG
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MNYPSILERIRTEITPWIGAGRVADYIPELAKVPAERFGIAIVTLDGQTHTVGDAHERFSIQSISKLFACTLAFQLLGDE LWQRVGREPSGTAFNSLVQLESERGKPRNPFINAGALVVTDVLSRRFVRAETALVEFIRRLIGSNEIDYDLRVAQSEWQH AERNRAMAHFMASFGNMWMPPDMVVEAYCRQCAISMNCVELAQAALFLANGGVAPVTGERVVDASSAKRLSALMLTCGTY DAAGDFVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSLAGVLALEWLTSYTERSIF
Sequences:
>Translated_304_residues MNYPSILERIRTEITPWIGAGRVADYIPELAKVPAERFGIAIVTLDGQTHTVGDAHERFSIQSISKLFACTLAFQLLGDE LWQRVGREPSGTAFNSLVQLESERGKPRNPFINAGALVVTDVLSRRFVRAETALVEFIRRLIGSNEIDYDLRVAQSEWQH AERNRAMAHFMASFGNMWMPPDMVVEAYCRQCAISMNCVELAQAALFLANGGVAPVTGERVVDASSAKRLSALMLTCGTY DAAGDFVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSLAGVLALEWLTSYTERSIF >Mature_304_residues MNYPSILERIRTEITPWIGAGRVADYIPELAKVPAERFGIAIVTLDGQTHTVGDAHERFSIQSISKLFACTLAFQLLGDE LWQRVGREPSGTAFNSLVQLESERGKPRNPFINAGALVVTDVLSRRFVRAETALVEFIRRLIGSNEIDYDLRVAQSEWQH AERNRAMAHFMASFGNMWMPPDMVVEAYCRQCAISMNCVELAQAALFLANGGVAPVTGERVVDASSAKRLSALMLTCGTY DAAGDFVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSLAGVLALEWLTSYTERSIF
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=275, Percent_Identity=39.6363636363636, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI20336214, Length=296, Percent_Identity=34.7972972972973, Blast_Score=180, Evalue=2e-45, Organism=Escherichia coli, GI1787804, Length=301, Percent_Identity=54.1528239202658, Blast_Score=316, Evalue=1e-87, Organism=Escherichia coli, GI1786693, Length=272, Percent_Identity=39.7058823529412, Blast_Score=202, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507019, Length=297, Percent_Identity=38.3838383838384, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17532727, Length=306, Percent_Identity=36.6013071895425, Blast_Score=191, Evalue=4e-49, Organism=Caenorhabditis elegans, GI193204073, Length=281, Percent_Identity=37.0106761565836, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193204075, Length=283, Percent_Identity=36.7491166077738, Blast_Score=181, Evalue=3e-46, Organism=Drosophila melanogaster, GI281363241, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI24653162, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI281363239, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24653166, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24653164, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24653158, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24653156, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI116008307, Length=289, Percent_Identity=37.0242214532872, Blast_Score=186, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015868 [H]
Pfam domain/function: PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 33105; Mature: 33105
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYPSILERIRTEITPWIGAGRVADYIPELAKVPAERFGIAIVTLDGQTHTVGDAHERFS CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCEEEEEECCCCCCCCCHHHHHH IQSISKLFACTLAFQLLGDELWQRVGREPSGTAFNSLVQLESERGKPRNPFINAGALVVT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH DVLSRRFVRAETALVEFIRRLIGSNEIDYDLRVAQSEWQHAERNRAMAHFMASFGNMWMP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDMVVEAYCRQCAISMNCVELAQAALFLANGGVAPVTGERVVDASSAKRLSALMLTCGTY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCC DAAGDFVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSLAGVLALEWLTSYTE CCCCCEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH RSIF HCCC >Mature Secondary Structure MNYPSILERIRTEITPWIGAGRVADYIPELAKVPAERFGIAIVTLDGQTHTVGDAHERFS CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCEEEEEECCCCCCCCCHHHHHH IQSISKLFACTLAFQLLGDELWQRVGREPSGTAFNSLVQLESERGKPRNPFINAGALVVT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH DVLSRRFVRAETALVEFIRRLIGSNEIDYDLRVAQSEWQHAERNRAMAHFMASFGNMWMP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDMVVEAYCRQCAISMNCVELAQAALFLANGGVAPVTGERVVDASSAKRLSALMLTCGTY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCC DAAGDFVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSLAGVLALEWLTSYTE CCCCCEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH RSIF HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA