Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is ycbX [H]

Identifier: 238025131

GI number: 238025131

Start: 2244845

End: 2245714

Strand: Direct

Name: ycbX [H]

Synonym: bglu_2g17960

Alternate gene names: 238025131

Gene position: 2244845-2245714 (Clockwise)

Preceding gene: 238025118

Following gene: 238025132

Centisome position: 79.4

GC content: 70.34

Gene sequence:

>870_bases
ATGCCGATCCTCAGTGAACTGTTCCTCTATCCGATCAAGTCCTGTGCCGGCATATCGGTCACGCGCGCGCGGCTGCTGGA
AAGCGGCCTGGAACACGACCGCGGCTGGATGGTGGCGGAGCCGTCCGGCGCGATGGTCACGCAGCGCGAGCACGCCAGGC
TCGCGCTGGTGCGCGTCGCGATCGGCGAAACCGAGCTGCTGGTCGACGCGCCCGGCATGCCCACACTGTGCACACCGCTC
GACCCACGCGCCCACCAGGGCGCGCCGACGCTGCGCGTCACGGTCTGGGGCAGCAGCTTCGACGCGCTCGACACCGGCGC
GGCCACGGCGCAGTGGTTCAGCGACTATCTGGGCATCACGGTGCGGCTGATGCGCTTCTCGCCAGAGGTGCGTCGCGAGG
TGAGCCGCGAGTGGACCGGCCGGCTCAGCACCCACACTCAGTTCGCCGACGGCTTCCCGGTGATGGTGGTCGGCCAGTCC
TCGCTCGACGATCTGAACGCGCGGCTCGCACGGCGCGGCGTGCCGGCGGTGGGCATGGACCGCTTCCGCCCGAACCTGGT
GATCGCGGGGCTCGCGGCCTACGAGGAGGATTTCGTCGAGCAGCTGGACGTGCAGACCGCCTCGGGTCCGATCCGGCTCA
GGCTCGTCAAGCTCTGCACGCGCTGCCCGATCCCCGACATCGACCAGACGCTCGGCGGCCCGCATCCGCAGTGGCCGCAC
GAGCCGCTCGACACACTGAGCACCTATCGCGCGAGCGCACGCTTCGGCGGCGCGCTGACGTTCGGCAAGCATGCGGTGCT
CGCGAGCGCCGGAGCCGGCGTACTCGAAACCGGCCTGCCGCTCGAGGCCGAGATCGGCTTCGACGATTGA

Upstream 100 bases:

>100_bases
CCACGGCGAAACGGTAGCTCGATACCACCGCCCCCTCCGGATCATCGATCTGGCAGAATCCGGATTCCCCGCACCTCGCG
CGCCCCGCACGCCCACCGTC

Downstream 100 bases:

>100_bases
GCCCGCGCGCGGCGCTTCCCACCATCTGACATTGTCAGTAATCCTCTTTTTCCGGCTGCGCCGGCCGGATGCGCCGGCTC
GCGCGGCGGCGCCACCAGGG

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPILSELFLYPIKSCAGISVTRARLLESGLEHDRGWMVAEPSGAMVTQREHARLALVRVAIGETELLVDAPGMPTLCTPL
DPRAHQGAPTLRVTVWGSSFDALDTGAATAQWFSDYLGITVRLMRFSPEVRREVSREWTGRLSTHTQFADGFPVMVVGQS
SLDDLNARLARRGVPAVGMDRFRPNLVIAGLAAYEEDFVEQLDVQTASGPIRLRLVKLCTRCPIPDIDQTLGGPHPQWPH
EPLDTLSTYRASARFGGALTFGKHAVLASAGAGVLETGLPLEAEIGFDD

Sequences:

>Translated_289_residues
MPILSELFLYPIKSCAGISVTRARLLESGLEHDRGWMVAEPSGAMVTQREHARLALVRVAIGETELLVDAPGMPTLCTPL
DPRAHQGAPTLRVTVWGSSFDALDTGAATAQWFSDYLGITVRLMRFSPEVRREVSREWTGRLSTHTQFADGFPVMVVGQS
SLDDLNARLARRGVPAVGMDRFRPNLVIAGLAAYEEDFVEQLDVQTASGPIRLRLVKLCTRCPIPDIDQTLGGPHPQWPH
EPLDTLSTYRASARFGGALTFGKHAVLASAGAGVLETGLPLEAEIGFDD
>Mature_288_residues
PILSELFLYPIKSCAGISVTRARLLESGLEHDRGWMVAEPSGAMVTQREHARLALVRVAIGETELLVDAPGMPTLCTPLD
PRAHQGAPTLRVTVWGSSFDALDTGAATAQWFSDYLGITVRLMRFSPEVRREVSREWTGRLSTHTQFADGFPVMVVGQSS
LDDLNARLARRGVPAVGMDRFRPNLVIAGLAAYEEDFVEQLDVQTASGPIRLRLVKLCTRCPIPDIDQTLGGPHPQWPHE
PLDTLSTYRASARFGGALTFGKHAVLASAGAGVLETGLPLEAEIGFDD

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI31542713, Length=254, Percent_Identity=31.496062992126, Blast_Score=128, Evalue=7e-30,
Organism=Homo sapiens, GI224600454, Length=280, Percent_Identity=31.7857142857143, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI157388923, Length=245, Percent_Identity=25.3061224489796, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1787179, Length=282, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17540702, Length=287, Percent_Identity=28.2229965156794, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17561286, Length=263, Percent_Identity=26.9961977186312, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71990971, Length=264, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI17647607, Length=266, Percent_Identity=28.9473684210526, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 31398; Mature: 31267

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILSELFLYPIKSCAGISVTRARLLESGLEHDRGWMVAEPSGAMVTQREHARLALVRVA
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEECHHHHEEEEEEEE
IGETELLVDAPGMPTLCTPLDPRAHQGAPTLRVTVWGSSFDALDTGAATAQWFSDYLGIT
ECCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
VRLMRFSPEVRREVSREWTGRLSTHTQFADGFPVMVVGQSSLDDLNARLARRGVPAVGMD
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHH
RFRPNLVIAGLAAYEEDFVEQLDVQTASGPIRLRLVKLCTRCPIPDIDQTLGGPHPQWPH
HCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
EPLDTLSTYRASARFGGALTFGKHAVLASAGAGVLETGLPLEAEIGFDD
CHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCHHHCCCCCEECCCCCC
>Mature Secondary Structure 
PILSELFLYPIKSCAGISVTRARLLESGLEHDRGWMVAEPSGAMVTQREHARLALVRVA
CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEECHHHHEEEEEEEE
IGETELLVDAPGMPTLCTPLDPRAHQGAPTLRVTVWGSSFDALDTGAATAQWFSDYLGIT
ECCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
VRLMRFSPEVRREVSREWTGRLSTHTQFADGFPVMVVGQSSLDDLNARLARRGVPAVGMD
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHH
RFRPNLVIAGLAAYEEDFVEQLDVQTASGPIRLRLVKLCTRCPIPDIDQTLGGPHPQWPH
HCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
EPLDTLSTYRASARFGGALTFGKHAVLASAGAGVLETGLPLEAEIGFDD
CHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCHHHCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]