| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yjjL [H]
Identifier: 238024791
GI number: 238024791
Start: 1828542
End: 1829879
Strand: Reverse
Name: yjjL [H]
Synonym: bglu_2g14290
Alternate gene names: 238024791
Gene position: 1829879-1828542 (Counterclockwise)
Preceding gene: 238024792
Following gene: 238024789
Centisome position: 64.72
GC content: 69.73
Gene sequence:
>1338_bases ATGAAGCCTTCCGCTCGTGCCGCGCTACCGGCCGATGCCGCGCTCGAGCCCGCCGGCGATGCCGCCTCGCCGCGCATCCG GCGCATCCAGCGCACGGCGCTCACGTTGCTGCTGATGAGCGGCGTGGTCAACTACCTCGATCGCGCCACCCTGTCGATCG CCACGCCGCTGATCCGCCACGACCTCGGTTTCTCGGTGCCGCAGATGGGGCTGCTGCTGTCGGCGTTCCTGTGGGCCTAC GCGTTCGCGCAGCTGCCGGCCGGCATCCTGATCGACCGGCTCGGCGCGCGCCTGACGCTGGCCGCGAGCCTCGGGCTCTG GTCGATCGCACAGACCTTCGGCGGCCTCGTCAACGGCTTCTCGACGTTTTTCGCCGCGCGCATGGTGCTCGGCGTCGGCG AGGCACCGCAGTTCCCCACCAGCGCGCGGATCGTGCGCGACTGGTTCGCCGGACATGAGCGCGGCACGGCCACCGGCATC TGGAACAGTTCCTCGACGCTGGGCACGGCGATCTCCGCGCCGCTCCTGACGCTGCTGATGCTCAACGTGGGCTGGCGCTG GATGTTCGTGGTGATGGGGGCGGCCGGGCTGCTGCTGGCGGTGGCGTTCTATCTGCTGCACCGCGATCCGCGCCACGTCA CGCTGACCCACCGCGAGCGCGCCTATCTCGACGACGCCGGCGGCCTCACCGGCACGCGTCCGAGCTGGGCCGACTGGCGC CATCTGCTGCGCTATCGCAGCACCTGGGGCATGCTGCTCGGCTTCTTCGGCACGATCTACGTGCTCTGGCTCTACAACGC CTGGTTGCCCACCTATCTGCAGATGGAGCACCACCTGACGATCGCACGCACCGGCTGGGTGGCGGCCGTGCCCTACGTGT TCGGCGTGATCGGCAGCCTGTCGGGCGGGCGGATCTGCGACGTGCTCGCGCGTCACGGCGTATCGACCATGAACAGCCGC AAGTATCCGATGGTCGCCTCGCTGCTCGGCATCGCGGTGTTCACGACGCTGACCGCGCTGACCGACAGCACCACGCTCGC GGTGGTGTTCATCTCGGTGTCGATGCTGCTGATGTACATTTCGTCGAGCGCGGCCTGGGCGATGGCCTCGGTGGCCGCGC CGGCCAACTCCACGGCCTCGATCGGCGCGATGCAGAATTTCGGCGGCTATTTCGGCGGCGCGCTGGCGCCGGTCGTGACG GGCTTCATCGTGGCCGCCACCCACTCGTTCAAGCCGGCACTCTACGTCGGGGCCGCGGTGGTGGTGGTCGCGATGGTCGG CTACTGGACGTTGGTGGGCGAGCCGGTGCCGCCGCGCGAGACGCAGGCGCCGCGCTGA
Upstream 100 bases:
>100_bases GCCCTGACACGCGAGCGCTGCCGGTTGCTTTGCGGTTCGCAAGGTTACGCCCGGCCCAGCGGGCGGCCATCAGCTGAACG AGACTGCCAGGAGACACCCG
Downstream 100 bases:
>100_bases CGGCGATCCAGGCGGCGTGGCACGCCGCGCCGTGACTGCGCGCTTGCGCGCGCGCCTTCGGTCGCCCTGCATCCGCACCT GGCCGAAGCCGTCGCGCGGC
Product: major facilitator superfamily
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRHDLGFSVPQMGLLLSAFLWAY AFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGFSTFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGI WNSSSTLGTAISAPLLTLLMLNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSLSGGRICDVLARHGVSTMNSR KYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYISSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVT GFIVAATHSFKPALYVGAAVVVVAMVGYWTLVGEPVPPRETQAPR
Sequences:
>Translated_445_residues MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRHDLGFSVPQMGLLLSAFLWAY AFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGFSTFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGI WNSSSTLGTAISAPLLTLLMLNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSLSGGRICDVLARHGVSTMNSR KYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYISSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVT GFIVAATHSFKPALYVGAAVVVVAMVGYWTLVGEPVPPRETQAPR >Mature_445_residues MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRHDLGFSVPQMGLLLSAFLWAY AFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGFSTFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGI WNSSSTLGTAISAPLLTLLMLNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSLSGGRICDVLARHGVSTMNSR KYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYISSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVT GFIVAATHSFKPALYVGAAVVVVAMVGYWTLVGEPVPPRETQAPR
Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI4885441, Length=368, Percent_Identity=23.9130434782609, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI154350196, Length=379, Percent_Identity=25.3298153034301, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI6912666, Length=374, Percent_Identity=21.6577540106952, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI9966811, Length=296, Percent_Identity=25, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI256219598, Length=399, Percent_Identity=23.0576441102757, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4503847, Length=399, Percent_Identity=23.0576441102757, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI256219483, Length=399, Percent_Identity=23.0576441102757, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI148743791, Length=355, Percent_Identity=21.9718309859155, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI9945322, Length=347, Percent_Identity=23.342939481268, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI5031955, Length=258, Percent_Identity=23.2558139534884, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI256219543, Length=421, Percent_Identity=20.4275534441805, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI21322234, Length=283, Percent_Identity=22.2614840989399, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI148728191, Length=304, Percent_Identity=22.3684210526316, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI2367379, Length=434, Percent_Identity=41.4746543778802, Blast_Score=352, Evalue=2e-98, Organism=Escherichia coli, GI87082320, Length=428, Percent_Identity=31.5420560747664, Blast_Score=222, Evalue=5e-59, Organism=Escherichia coli, GI1789515, Length=436, Percent_Identity=32.5688073394495, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1789152, Length=420, Percent_Identity=31.9047619047619, Blast_Score=199, Evalue=3e-52, Organism=Escherichia coli, GI2367193, Length=414, Percent_Identity=24.6376811594203, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI87082071, Length=371, Percent_Identity=23.989218328841, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788573, Length=386, Percent_Identity=22.020725388601, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082231, Length=167, Percent_Identity=26.9461077844311, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082310, Length=213, Percent_Identity=27.6995305164319, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17535049, Length=431, Percent_Identity=26.4501160092807, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115533556, Length=385, Percent_Identity=24.9350649350649, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71997452, Length=301, Percent_Identity=22.5913621262458, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17552542, Length=383, Percent_Identity=24.5430809399478, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115533554, Length=367, Percent_Identity=25.3405994550409, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560030, Length=282, Percent_Identity=26.241134751773, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193205400, Length=318, Percent_Identity=22.6415094339623, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560966, Length=278, Percent_Identity=27.3381294964029, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17537329, Length=321, Percent_Identity=24.6105919003115, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17566884, Length=286, Percent_Identity=22.027972027972, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17509575, Length=240, Percent_Identity=22.0833333333333, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI32565914, Length=354, Percent_Identity=22.316384180791, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI32565916, Length=240, Percent_Identity=23.3333333333333, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25141316, Length=365, Percent_Identity=24.1095890410959, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25141341, Length=384, Percent_Identity=23.9583333333333, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25141318, Length=365, Percent_Identity=24.1095890410959, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71991448, Length=377, Percent_Identity=23.342175066313, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71991453, Length=377, Percent_Identity=23.342175066313, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193208223, Length=368, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI20130167, Length=425, Percent_Identity=22.1176470588235, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24648416, Length=433, Percent_Identity=22.6327944572748, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI21356189, Length=433, Percent_Identity=22.6327944572748, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI24583789, Length=394, Percent_Identity=24.6192893401015, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI28573299, Length=365, Percent_Identity=24.1095890410959, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24584153, Length=377, Percent_Identity=22.8116710875332, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI19922400, Length=237, Percent_Identity=26.5822784810127, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24639764, Length=338, Percent_Identity=25.4437869822485, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24654215, Length=237, Percent_Identity=26.5822784810127, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24653727, Length=366, Percent_Identity=23.224043715847, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24654041, Length=278, Percent_Identity=25.5395683453237, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24654037, Length=278, Percent_Identity=25.5395683453237, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI17864456, Length=280, Percent_Identity=26.0714285714286, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654039, Length=280, Percent_Identity=26.0714285714286, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24655255, Length=363, Percent_Identity=23.4159779614325, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550460, Length=363, Percent_Identity=23.4159779614325, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI19920686, Length=269, Percent_Identity=24.5353159851301, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580790, Length=361, Percent_Identity=21.8836565096953, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI20129235, Length=393, Percent_Identity=24.6819338422392, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24654044, Length=211, Percent_Identity=27.4881516587678, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI20130135, Length=488, Percent_Identity=20.4918032786885, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641682, Length=283, Percent_Identity=24.3816254416961, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24655271, Length=470, Percent_Identity=20.4255319148936, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI62484226, Length=330, Percent_Identity=22.1212121212121, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI28573708, Length=269, Percent_Identity=22.6765799256506, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI28573707, Length=269, Percent_Identity=22.6765799256506, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47780; Mature: 47780
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGFSVPQMGLLLSAFLWAYAFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGF HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH STFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGIWNSSSTLGTAISAPLLTLLM HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH LNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHHHH HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCC SGGRICDVLARHGVSTMNSRKYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYI CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVTGFIVAATHSFKPALYVGAAV HCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VVVAMVGYWTLVGEPVPPRETQAPR HHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGFSVPQMGLLLSAFLWAYAFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGF HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH STFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGIWNSSSTLGTAISAPLLTLLM HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH LNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHHHH HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCC SGGRICDVLARHGVSTMNSRKYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYI CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVTGFIVAATHSFKPALYVGAAV HCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VVVAMVGYWTLVGEPVPPRETQAPR HHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]