| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024779
Identifier: 238024779
GI number: 238024779
Start: 1809886
End: 1810677
Strand: Reverse
Name: 238024779
Synonym: bglu_2g14170
Alternate gene names: NA
Gene position: 1810677-1809886 (Counterclockwise)
Preceding gene: 238024780
Following gene: 238024778
Centisome position: 64.04
GC content: 69.32
Gene sequence:
>792_bases ATGAAAGTTCGAAATGCGAGCCTTTGGGCGCCGGCGGGCATGCGGCGCTGGGTCTATGCCGCCGGGGCGCTGGTGCTCGC GATCGCCGTGCGGCTCGCGTTGCATCCGCTGCTCGGTCCGGTCATGCCCGGCACCGCCTTCGCGATCATGGCGGTGCTGG TCGAATACTATCTGGGGCTCGCGCCGGCCCTGGTGGTCATGTTCTCCGCGCTGCCGATCGCCGACTTTCTGTTCGTGCCG CCTTATGCCTCGCTCGACGAGTTCCTGACGTTCGACCGCGGCGACATCGTGCTGCTGGTCTCCTATCCGCTCGTCACGCT GCTCGTCATCTCGCTGGTGGAGCGGCTGCGCCGTGCCCAGTTTCGCGCGCGGCTGATCACCTCGGTCGCGCAGTCGCGCT ACGAGATGCTGCTGCGCCAGGACAACGATCGCCTGCTCGCGCGCCGCGCCGTGGACGAAACGCACCGCCTGCTGCGCCAT CTCGCCCAGCACCAGTCGCAGCTGATTCTGATCAAGGCGCTCGAACGCAACGCCGCGCAGCGCGCGCAGGTCGGCCAGAG CGTCGACGCGCCGCTGCCGTTCGGCGGCGAGGTCGCCCCCGGCCCGCGCTACGCGCAGGTCCATCCCGACGACATCCAGC GCATCACGCACACGCTGTCGGCGGGCAGCCAGCGGGTGCGCGCGCGCTCGGACGACAGCGGCGGCGAGTTCCGCCTCACG CAGTGCCAATGCGAACGATTCACGACGCACGCGGGCGATTTCCTCGTGCTGCGCGTGGAGGAGCAAGGCTGA
Upstream 100 bases:
>100_bases GCCTGCGCCGGCCCCCCAGGTTGAAAAACATCATGTCGCGCTTGCCACGCCGCGTTCGAAACTCGGTACTATTCAGCGTT TTTTGAAATATCCGGTAAAC
Downstream 100 bases:
>100_bases GATGGCGAGCCTCGAGACGACCCGCGCCGACACCGCGAGCCGCCCGGCCCGCGCCTCGGCCGCCGCGCCGATCTTCGGCG AAGGCGATGGCCATGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKVRNASLWAPAGMRRWVYAAGALVLAIAVRLALHPLLGPVMPGTAFAIMAVLVEYYLGLAPALVVMFSALPIADFLFVP PYASLDEFLTFDRGDIVLLVSYPLVTLLVISLVERLRRAQFRARLITSVAQSRYEMLLRQDNDRLLARRAVDETHRLLRH LAQHQSQLILIKALERNAAQRAQVGQSVDAPLPFGGEVAPGPRYAQVHPDDIQRITHTLSAGSQRVRARSDDSGGEFRLT QCQCERFTTHAGDFLVLRVEEQG
Sequences:
>Translated_263_residues MKVRNASLWAPAGMRRWVYAAGALVLAIAVRLALHPLLGPVMPGTAFAIMAVLVEYYLGLAPALVVMFSALPIADFLFVP PYASLDEFLTFDRGDIVLLVSYPLVTLLVISLVERLRRAQFRARLITSVAQSRYEMLLRQDNDRLLARRAVDETHRLLRH LAQHQSQLILIKALERNAAQRAQVGQSVDAPLPFGGEVAPGPRYAQVHPDDIQRITHTLSAGSQRVRARSDDSGGEFRLT QCQCERFTTHAGDFLVLRVEEQG >Mature_263_residues MKVRNASLWAPAGMRRWVYAAGALVLAIAVRLALHPLLGPVMPGTAFAIMAVLVEYYLGLAPALVVMFSALPIADFLFVP PYASLDEFLTFDRGDIVLLVSYPLVTLLVISLVERLRRAQFRARLITSVAQSRYEMLLRQDNDRLLARRAVDETHRLLRH LAQHQSQLILIKALERNAAQRAQVGQSVDAPLPFGGEVAPGPRYAQVHPDDIQRITHTLSAGSQRVRARSDDSGGEFRLT QCQCERFTTHAGDFLVLRVEEQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29275; Mature: 29275
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRNASLWAPAGMRRWVYAAGALVLAIAVRLALHPLLGPVMPGTAFAIMAVLVEYYLGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH APALVVMFSALPIADFLFVPPYASLDEFLTFDRGDIVLLVSYPLVTLLVISLVERLRRAQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH FRARLITSVAQSRYEMLLRQDNDRLLARRAVDETHRLLRHLAQHQSQLILIKALERNAAQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH RAQVGQSVDAPLPFGGEVAPGPRYAQVHPDDIQRITHTLSAGSQRVRARSDDSGGEFRLT HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEH QCQCERFTTHAGDFLVLRVEEQG HHHHHHHHCCCCCEEEEEEECCC >Mature Secondary Structure MKVRNASLWAPAGMRRWVYAAGALVLAIAVRLALHPLLGPVMPGTAFAIMAVLVEYYLGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH APALVVMFSALPIADFLFVPPYASLDEFLTFDRGDIVLLVSYPLVTLLVISLVERLRRAQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH FRARLITSVAQSRYEMLLRQDNDRLLARRAVDETHRLLRHLAQHQSQLILIKALERNAAQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH RAQVGQSVDAPLPFGGEVAPGPRYAQVHPDDIQRITHTLSAGSQRVRARSDDSGGEFRLT HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEH QCQCERFTTHAGDFLVLRVEEQG HHHHHHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA