| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ssuA [H]
Identifier: 238024775
GI number: 238024775
Start: 1805880
End: 1806905
Strand: Reverse
Name: ssuA [H]
Synonym: bglu_2g14130
Alternate gene names: 238024775
Gene position: 1806905-1805880 (Counterclockwise)
Preceding gene: 238024776
Following gene: 238024772
Centisome position: 63.91
GC content: 73.98
Gene sequence:
>1026_bases ATGATTTCCACCACCGGCCAGCCGGGCGCCACGGCCGGCGGCACCACCCGGCGCGACTGGCTGAGGGCGGCGGGCACCGC CGCGGCGCTCGCGCTGGCGCGGCCGGCAGGGCTCGCCGGGCTCGGTGCGCTCGCGAGCGGCACCGCGTGCGCGGCGGGCG ACGCGGCCACGCTGCGGATCGGCTATCAGAAATACGGCAACTTCGTCGTGCTGAAGGCGCGCGGCACGCTGGAAAAGCGG CTCGCGCCGCTCGGCGTGGGCGTGCGCTGGATCGAATTCCCGGGCGGCCCGCAACTGCTCGAGGGGCTCGCGGCCGGCGC CCTGGACATCGGCACCGTCGGCGAGACCCCGCCGATCTTCGCGCAGGCCGGCAAGGTCGATTTCGTCTATATCGGCGCCG AGCCGCCCGCGCCGAAGGGCGAGGCGATCGTGGTGCCGCGCGACTCGCCGATTCGCGGCGTGGCGGGCCTGCGCGGCAAG AAGGTCGCGCTCAATCGCGGCTCCAACGTCCACTACCTGCTGGTGAAGGCGCTGCAGGCGGCGAAGCTCGACTATCGCGA CATCGAGCCCGTCTATCTGGCGCCGGCCGACGGGCGCGCCGCGTTCGAGCAGCGTGGGGTCGACGCCTGGGTGATCTGGG ACCCGTACCTGGCGGCGGTCGAGCGCCAGACCGGCGCGCGCACGCTGGCCAACGGCGAGGGGCTGGTCCGCAACACGCAG TATTACCTCGCGAGCCGGCCGTTCGCGACGGCGCGGCCCGAGATCGTGCGCGCCGTGCTGGCCGAGATCGATGCCACCGA TGCCTGGGCGCGCGATCACGTGCCCGAGGTCGCCGCACAACTCGCGCCGCTGGTCGGGCTCGACGCGCCGACGCTGGAGC TGGCGCTCGGCCGCGCCGCCTACCGGGTGGAGCCGATCAGCGACGCGACGCTCGCCTATCAGCAGCAGGTCGCCGATGCG TTCACCGCGCTGAAGCTGATCCCGGGCAGGCTCGACGTGACGCAGGCGCGCTGGACGGCGCGCTGA
Upstream 100 bases:
>100_bases CCGCCGGCGTCCGTGACCGGCGCAGGGCACGGCACGGACCTTCCGACCAACCGAACACGGACACCAGGCAACGATGCGAC GCGGGCTCCCGATCTCCCCC
Downstream 100 bases:
>100_bases GACGCGCGCCCCCGGCGGCGTCGCGCAGCCAGGCGGCGCCGGCGAGCGCGGCACCTGCCGGGCTCAGTCGGCCCAGAGCT GCCAGAGCAGCGCGAGGTTG
Product: putative phosphorous compounds metabolism-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MISTTGQPGATAGGTTRRDWLRAAGTAAALALARPAGLAGLGALASGTACAAGDAATLRIGYQKYGNFVVLKARGTLEKR LAPLGVGVRWIEFPGGPQLLEGLAAGALDIGTVGETPPIFAQAGKVDFVYIGAEPPAPKGEAIVVPRDSPIRGVAGLRGK KVALNRGSNVHYLLVKALQAAKLDYRDIEPVYLAPADGRAAFEQRGVDAWVIWDPYLAAVERQTGARTLANGEGLVRNTQ YYLASRPFATARPEIVRAVLAEIDATDAWARDHVPEVAAQLAPLVGLDAPTLELALGRAAYRVEPISDATLAYQQQVADA FTALKLIPGRLDVTQARWTAR
Sequences:
>Translated_341_residues MISTTGQPGATAGGTTRRDWLRAAGTAAALALARPAGLAGLGALASGTACAAGDAATLRIGYQKYGNFVVLKARGTLEKR LAPLGVGVRWIEFPGGPQLLEGLAAGALDIGTVGETPPIFAQAGKVDFVYIGAEPPAPKGEAIVVPRDSPIRGVAGLRGK KVALNRGSNVHYLLVKALQAAKLDYRDIEPVYLAPADGRAAFEQRGVDAWVIWDPYLAAVERQTGARTLANGEGLVRNTQ YYLASRPFATARPEIVRAVLAEIDATDAWARDHVPEVAAQLAPLVGLDAPTLELALGRAAYRVEPISDATLAYQQQVADA FTALKLIPGRLDVTQARWTAR >Mature_341_residues MISTTGQPGATAGGTTRRDWLRAAGTAAALALARPAGLAGLGALASGTACAAGDAATLRIGYQKYGNFVVLKARGTLEKR LAPLGVGVRWIEFPGGPQLLEGLAAGALDIGTVGETPPIFAQAGKVDFVYIGAEPPAPKGEAIVVPRDSPIRGVAGLRGK KVALNRGSNVHYLLVKALQAAKLDYRDIEPVYLAPADGRAAFEQRGVDAWVIWDPYLAAVERQTGARTLANGEGLVRNTQ YYLASRPFATARPEIVRAVLAEIDATDAWARDHVPEVAAQLAPLVGLDAPTLELALGRAAYRVEPISDATLAYQQQVADA FTALKLIPGRLDVTQARWTAR
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=303, Percent_Identity=44.2244224422442, Blast_Score=251, Evalue=5e-68, Organism=Escherichia coli, GI87081727, Length=223, Percent_Identity=27.8026905829596, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 35831; Mature: 35831
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTTGQPGATAGGTTRRDWLRAAGTAAALALARPAGLAGLGALASGTACAAGDAATLRI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCEEEEE GYQKYGNFVVLKARGTLEKRLAPLGVGVRWIEFPGGPQLLEGLAAGALDIGTVGETPPIF EHHHHCCEEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCE AQAGKVDFVYIGAEPPAPKGEAIVVPRDSPIRGVAGLRGKKVALNRGSNVHYLLVKALQA EECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHH AKLDYRDIEPVYLAPADGRAAFEQRGVDAWVIWDPYLAAVERQTGARTLANGEGLVRNTQ HCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEECHHHHHHHHHCCCCEECCCCCEEECCE YYLASRPFATARPEIVRAVLAEIDATDAWARDHVPEVAAQLAPLVGLDAPTLELALGRAA EEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHH YRVEPISDATLAYQQQVADAFTALKLIPGRLDVTQARWTAR EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure MISTTGQPGATAGGTTRRDWLRAAGTAAALALARPAGLAGLGALASGTACAAGDAATLRI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCEEEEE GYQKYGNFVVLKARGTLEKRLAPLGVGVRWIEFPGGPQLLEGLAAGALDIGTVGETPPIF EHHHHCCEEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCE AQAGKVDFVYIGAEPPAPKGEAIVVPRDSPIRGVAGLRGKKVALNRGSNVHYLLVKALQA EECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHH AKLDYRDIEPVYLAPADGRAAFEQRGVDAWVIWDPYLAAVERQTGARTLANGEGLVRNTQ HCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEECHHHHHHHHHCCCCEECCCCCEEECCE YYLASRPFATARPEIVRAVLAEIDATDAWARDHVPEVAAQLAPLVGLDAPTLELALGRAA EEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHH YRVEPISDATLAYQQQVADAFTALKLIPGRLDVTQARWTAR EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10506196; 8905232; 9278503 [H]