| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024754
Identifier: 238024754
GI number: 238024754
Start: 1784321
End: 1784860
Strand: Reverse
Name: 238024754
Synonym: bglu_2g13920
Alternate gene names: NA
Gene position: 1784860-1784321 (Counterclockwise)
Preceding gene: 238024761
Following gene: 238024750
Centisome position: 63.13
GC content: 66.85
Gene sequence:
>540_bases ATGGACAGAAAGCAAGCAAAGGCGAAGGTGCACGAGATGCTGGCGGCCGGAACGAGCAAGAGCGAGGTGTTTCGCGCGCT GTCGGGGCAGGGCGTCAAGGATCGCACGCTGGCGTTCCTGATCGCCTCGCATCTCGATGCGCGCCGCTACGCGGACAACC GGGTCCACGTCAGGATCGTGATCGCGATCGCCTGCCTGCAACTGATCCTGGGCCTGCTGATCGGCGCCTACCTGGGCCTG ACTCAGTCGGCGGTGGCGGGGCTCATCGTCGGCGGCGTGGTGGCAGTGGTGGCCGGCCTGTTCCTGTGGGGTTTCGCGAC CCACAACGCGGGCGTCTACAACGCGTTCCTGATCCTCACGATCGTGCAGTGGACGCGCCAGCTGCGCGATTTCGCCGGCG ACCCGGGCGGCACGGCCGTGGCGCTCGGCATCTCGATCGCGATCTTCGCCTACGTCTGGTTCGTGCGCGGCCGGCTGTTT CCCGATTTCGCCTTCATCAGCCCGCGCAAGGCGGGCGGCCAGTACGTGTTCACCGAGTGA
Upstream 100 bases:
>100_bases GCCGGCTATCTAAGCCCGTCAAAATTCGGCATGCTTACGCGGCCCGGCATCGCGAGGCACAGCCGGGCGCACCGACATCA ACGAGCGAGGAGCGGATACG
Downstream 100 bases:
>100_bases GCGCCGGGCGCGCGTCGCGCGGCCGGCGAGCGCGAGGCCGGCCCGCGGTGGCGCGCCCGCGCCGCCGATCTCACTTCTTC AGGCTGCGATACGAGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MDRKQAKAKVHEMLAAGTSKSEVFRALSGQGVKDRTLAFLIASHLDARRYADNRVHVRIVIAIACLQLILGLLIGAYLGL TQSAVAGLIVGGVVAVVAGLFLWGFATHNAGVYNAFLILTIVQWTRQLRDFAGDPGGTAVALGISIAIFAYVWFVRGRLF PDFAFISPRKAGGQYVFTE
Sequences:
>Translated_179_residues MDRKQAKAKVHEMLAAGTSKSEVFRALSGQGVKDRTLAFLIASHLDARRYADNRVHVRIVIAIACLQLILGLLIGAYLGL TQSAVAGLIVGGVVAVVAGLFLWGFATHNAGVYNAFLILTIVQWTRQLRDFAGDPGGTAVALGISIAIFAYVWFVRGRLF PDFAFISPRKAGGQYVFTE >Mature_179_residues MDRKQAKAKVHEMLAAGTSKSEVFRALSGQGVKDRTLAFLIASHLDARRYADNRVHVRIVIAIACLQLILGLLIGAYLGL TQSAVAGLIVGGVVAVVAGLFLWGFATHNAGVYNAFLILTIVQWTRQLRDFAGDPGGTAVALGISIAIFAYVWFVRGRLF PDFAFISPRKAGGQYVFTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19309; Mature: 19309
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKQAKAKVHEMLAAGTSKSEVFRALSGQGVKDRTLAFLIASHLDARRYADNRVHVRIV CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH IAIACLQLILGLLIGAYLGLTQSAVAGLIVGGVVAVVAGLFLWGFATHNAGVYNAFLILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IVQWTRQLRDFAGDPGGTAVALGISIAIFAYVWFVRGRLFPDFAFISPRKAGGQYVFTE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEECCC >Mature Secondary Structure MDRKQAKAKVHEMLAAGTSKSEVFRALSGQGVKDRTLAFLIASHLDARRYADNRVHVRIV CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH IAIACLQLILGLLIGAYLGLTQSAVAGLIVGGVVAVVAGLFLWGFATHNAGVYNAFLILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IVQWTRQLRDFAGDPGGTAVALGISIAIFAYVWFVRGRLFPDFAFISPRKAGGQYVFTE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA