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The map label for this gene is ygiK [H]

Identifier: 238024738

GI number: 238024738

Start: 1761547

End: 1762899

Strand: Reverse

Name: ygiK [H]

Synonym: bglu_2g13750

Alternate gene names: 238024738

Gene position: 1762899-1761547 (Counterclockwise)

Preceding gene: 238024739

Following gene: 238024736

Centisome position: 62.35

GC content: 66.22

Gene sequence:

>1353_bases
ATGGAACTCGCAATCCTTTCCATCAGCTTTCTGCTGCTGCTGTTTCTCGGGGTGCCCGTGTCGTTCGCGCTCGGGCTGTC
GTGCGTCGCGACCTATCTCGCCGAGGGGCTGCCGGTGGCCACCGCGATGCAGTCCGTGATTTCGGGGATGAACGCGTTCT
CGTTCCTCGCCGTGCCGTTCTTCATCTTCTCCGGCGAACTGATGCTGCACGGCGGCATTGCCGACCGGATCCTGAAATTC
GCGCAGTCGGCCGTCGGGCACTTCCGCGGCGGGCTCGGCATGGCCAACGTGGTGGCCTGCACGCTGTTCGGCGGCGTGTC
CGGTTCGCCGACCGCCGACACCTCGGCGATGGGCGGCGTGGTGATCCCGCTGATGAAGCGCGAAGGCTACAGTGCCGCCT
ACGCGGTGAACGTGACCACCCACGCCTCGCTGGCCGGCGCGCTGATGCCGACCTCGACCAACATGATCATCTACGCGTTC
GCCGCGCAGGGGATCACCGGCATGCTGAACGGGCACATGGTGAGCGGCGTGTCGATCGGCGACCTGCTGTTCTCGGGCCT
GCTGCCGGTGCTGTGGGTGATGGGCTTCGTGCTGATCGCCGCCTACTGGCAGGCACGCCGCTACGGCTACCCGCGCCGCC
CCGACGGCTCCACCGCGCTGCTGAAGTTCCCCGGCTGGTACGCGGTGGCGCGTTCGTTCGTGGGCGCGCTGCCGGGCCTG
GGCGTGATCGCCATCATCCTGGTGTGCGTGGCCAAGGGGATCGCCACGGCGACCGAGGCCGCCGCGATCGCCGTGGTGTA
CTCGCTGGTGCTCACGCTGTTCGTCTATCGCACGCTGACGATGAAGAAGCTGTGGCGCGCGCTGTCGCACGCGGCGCGCA
CCACCGGCGTGGTGCTGCTGCTGATCGCCGTGTCGAACATGCTGCGCTTCCAGATGTCGTATCTGGAGATTCCGGATGCG
ATCGAGCATCTGCTGCAGCAGTCGAATGCCGCGCCGTGGCTGATGCTGCTGTACATCAACATCCTGCAGGTGTTCCTCGG
CACGTTCGTGGACATGGCCGCGCACATCCTGATCACCACGCCGCTGTTCCTGCCGCTGGCCATGGCCTGCGGCGTGGGCC
CGGTGCAGTTCGGGATCATGCTGCTGCTGAACTGCTCGCTCGGCCTGGTGCATCCGCCGATCGGCTCGGTGCAGTTCGTG
GGCTGCGCGATCGGCGAGGTGTCGATCGGCGAGACCACCAAGACCGCCTGGCCGTACTACCTGGCGATCTTCAGCGCGAT
CAACATCGTGACGTACATGCCGTTCTTTTCGACCTGGCTGCCCAGCATCATCAGCGGGCATCCGGTGTTCTGA

Upstream 100 bases:

>100_bases
GGTCCGCTACCTGATCCCGATGCCGGCGGGTCTCGCCATCATCCTGTTCTCGCTCGAGCATCTGCTTGCGCTGCGCAAAC
GCAACCGAACCTGATCCACC

Downstream 100 bases:

>100_bases
CGCGGTGAAGGTTTGACGTAGCGCGGACGGGTGTTTGGCCAGTCGGTCGCGTGAGCTTCGACGGCGGCGTGGGATGCCAC
GGCCGCCGTTTTTTTATTGG

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MELAILSISFLLLLFLGVPVSFALGLSCVATYLAEGLPVATAMQSVISGMNAFSFLAVPFFIFSGELMLHGGIADRILKF
AQSAVGHFRGGLGMANVVACTLFGGVSGSPTADTSAMGGVVIPLMKREGYSAAYAVNVTTHASLAGALMPTSTNMIIYAF
AAQGITGMLNGHMVSGVSIGDLLFSGLLPVLWVMGFVLIAAYWQARRYGYPRRPDGSTALLKFPGWYAVARSFVGALPGL
GVIAIILVCVAKGIATATEAAAIAVVYSLVLTLFVYRTLTMKKLWRALSHAARTTGVVLLLIAVSNMLRFQMSYLEIPDA
IEHLLQQSNAAPWLMLLYINILQVFLGTFVDMAAHILITTPLFLPLAMACGVGPVQFGIMLLLNCSLGLVHPPIGSVQFV
GCAIGEVSIGETTKTAWPYYLAIFSAINIVTYMPFFSTWLPSIISGHPVF

Sequences:

>Translated_450_residues
MELAILSISFLLLLFLGVPVSFALGLSCVATYLAEGLPVATAMQSVISGMNAFSFLAVPFFIFSGELMLHGGIADRILKF
AQSAVGHFRGGLGMANVVACTLFGGVSGSPTADTSAMGGVVIPLMKREGYSAAYAVNVTTHASLAGALMPTSTNMIIYAF
AAQGITGMLNGHMVSGVSIGDLLFSGLLPVLWVMGFVLIAAYWQARRYGYPRRPDGSTALLKFPGWYAVARSFVGALPGL
GVIAIILVCVAKGIATATEAAAIAVVYSLVLTLFVYRTLTMKKLWRALSHAARTTGVVLLLIAVSNMLRFQMSYLEIPDA
IEHLLQQSNAAPWLMLLYINILQVFLGTFVDMAAHILITTPLFLPLAMACGVGPVQFGIMLLLNCSLGLVHPPIGSVQFV
GCAIGEVSIGETTKTAWPYYLAIFSAINIVTYMPFFSTWLPSIISGHPVF
>Mature_450_residues
MELAILSISFLLLLFLGVPVSFALGLSCVATYLAEGLPVATAMQSVISGMNAFSFLAVPFFIFSGELMLHGGIADRILKF
AQSAVGHFRGGLGMANVVACTLFGGVSGSPTADTSAMGGVVIPLMKREGYSAAYAVNVTTHASLAGALMPTSTNMIIYAF
AAQGITGMLNGHMVSGVSIGDLLFSGLLPVLWVMGFVLIAAYWQARRYGYPRRPDGSTALLKFPGWYAVARSFVGALPGL
GVIAIILVCVAKGIATATEAAAIAVVYSLVLTLFVYRTLTMKKLWRALSHAARTTGVVLLLIAVSNMLRFQMSYLEIPDA
IEHLLQQSNAAPWLMLLYINILQVFLGTFVDMAAHILITTPLFLPLAMACGVGPVQFGIMLLLNCSLGLVHPPIGSVQFV
GCAIGEVSIGETTKTAWPYYLAIFSAINIVTYMPFFSTWLPSIISGHPVF

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=404, Percent_Identity=30.4455445544554, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 47812; Mature: 47812

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAILSISFLLLLFLGVPVSFALGLSCVATYLAEGLPVATAMQSVISGMNAFSFLAVPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FIFSGELMLHGGIADRILKFAQSAVGHFRGGLGMANVVACTLFGGVSGSPTADTSAMGGV
HHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCE
VIPLMKREGYSAAYAVNVTTHASLAGALMPTSTNMIIYAFAAQGITGMLNGHMVSGVSIG
EEEHHHCCCCCEEEEEEEEHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHCCCEECCCHHH
DLLFSGLLPVLWVMGFVLIAAYWQARRYGYPRRPDGSTALLKFPGWYAVARSFVGALPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCH
GVIAIILVCVAKGIATATEAAAIAVVYSLVLTLFVYRTLTMKKLWRALSHAARTTGVVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAVSNMLRFQMSYLEIPDAIEHLLQQSNAAPWLMLLYINILQVFLGTFVDMAAHILITT
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLFLPLAMACGVGPVQFGIMLLLNCSLGLVHPPIGSVQFVGCAIGEVSIGETTKTAWPYY
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHH
LAIFSAINIVTYMPFFSTWLPSIISGHPVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MELAILSISFLLLLFLGVPVSFALGLSCVATYLAEGLPVATAMQSVISGMNAFSFLAVPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FIFSGELMLHGGIADRILKFAQSAVGHFRGGLGMANVVACTLFGGVSGSPTADTSAMGGV
HHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCE
VIPLMKREGYSAAYAVNVTTHASLAGALMPTSTNMIIYAFAAQGITGMLNGHMVSGVSIG
EEEHHHCCCCCEEEEEEEEHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHCCCEECCCHHH
DLLFSGLLPVLWVMGFVLIAAYWQARRYGYPRRPDGSTALLKFPGWYAVARSFVGALPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCH
GVIAIILVCVAKGIATATEAAAIAVVYSLVLTLFVYRTLTMKKLWRALSHAARTTGVVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAVSNMLRFQMSYLEIPDAIEHLLQQSNAAPWLMLLYINILQVFLGTFVDMAAHILITT
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLFLPLAMACGVGPVQFGIMLLLNCSLGLVHPPIGSVQFVGCAIGEVSIGETTKTAWPYY
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHH
LAIFSAINIVTYMPFFSTWLPSIISGHPVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]