| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024723
Identifier: 238024723
GI number: 238024723
Start: 1740796
End: 1743450
Strand: Reverse
Name: 238024723
Synonym: bglu_2g13600
Alternate gene names: NA
Gene position: 1743450-1740796 (Counterclockwise)
Preceding gene: 238024724
Following gene: 238024722
Centisome position: 61.66
GC content: 72.24
Gene sequence:
>2655_bases GTGCATCCCCACATTACCGACGATCTGGCCGCCGCCGCCATGCATACGCTGTTCGACACCGGATCGATACAGGACGCAGC CGAGCTCGGCGCAGCGCTCGCCGCCCCGGCGGTGACGGGCCGCTACGACGAGCTGCGCGGCGGCGCTGCCGCGTTGCAGA CGGCCGCGCTCGCGCCTGTCTGGCGCGAATTCTTCACGCAGCTCGGCAGCGTCGGCTTCGCCGACCTGGACCGCCGCGCC GAGGCGCTCGAGCGGCGCATGCGCGAGAACGGCCTGGCCTACCAGCTGCACGATCAGCACACGGCCGGCGCCGCCGCGCG GCCCTGGTCGCTCGACCTGCTGCCGATGATCGTCGCGCCGGCCGACTGGGCCGTCATCGAGCGCGGCGTGCTGCAGCGCG TCAGGCTCGCCAACGCGATCCTTGCCGACATCTACGGCGCGCAGACCATCCTGAAGGCGGGGCTGCTGCCGCCCGCGCTC GTCACCGGCCATCCCGGCTATCTGCGGCCGATGTGCGGCGCGGCGATTCCCGGCGGCACCTGGCTGCATCTGGCCGCCTT CGACCTGATGCGCACGCCCGACGGCCAGTGGCGGCTCGCCGCGCAGCACACGCAGGGGCCGACCGGGCTCGGCTACCTGC TGGAGAACCGGCTGATCGTCTCGCGGCTGTTCCCGCGCGCGTTCCGCGGGCTGCGCGTGCAGCGGCTCGCGGCCAGCTAT CGCGCGCTGCTGCGCAGCATGCAGGACCTGAGCCCGGCCGGAAAGAACTCGCGGATCGTGCTGCTGACCCCGGGCCGCCA CGCGCCCACCTATTTCGAGCACGCCTACCTGGCCCGCTATCTCGGGCTCACGCTGGTCGAGGGCGGCGACCTGACCGCGC GTGACAACCATGTCTATCTGAAAACGCTGAGCGGGCTGGAGCCGGTGCACGGCATCCTGCGCCGCGTCGACGACGAGTGG CTCGATCCGCTCGAGCTGCGCCCCGAATCGATGCTCGGCGTGCCGGGCCTGCTGCAGGCGGTGCGTGCCGGCAACGTGCT GATCGCCAACGCGCCGGGCTCGGCGTTCCTCGAATCGCCGGGCGTGCTCGGCTTCATGCCGAAGCTGGCCGAGCGCATCC TCGGCGAGACCCTGGCGCTGCCGGCGCTGCCGACCTGGTGGTGCGGCGAGGCGGCGGCCTGCGCCGAGGCGCTGCCGCAG CTCGCGCGCGCCATCATCAAGCCGGCCTACCCGCCGGGCGCGCAGGCGGGCGGGCGTTTCGATCCGGTGATCGGCGCGCG GCTCACCGCGCAGCAGCTCGCCGACTGGCGCGCGCGGATCGCCGCGCATCCGGCGCACTACGTGATCCAGTCGGACCTGC CCCCGTCGCAGGCGCCGACCTGGCCGAGCGCGAGCGGCGCGCGGTCCTACCAGGGCGGCGCGCGGATCGTGCCGAAGCCG CTGCTGCTGCGCGTGTTCGCGCTGGCCGACGGCGCGGGCTCGTGGCGCGTGCTGCCGGGCGGCCTGTCGCGCGTGGGCAC GCGCGACGAGCTGCTCAACGCGCCGATGCCGCGCGGCGGCAGCAGCGTCGACACCTGGGTGATCACCGAGGGCGCGATCG ATCCGACCACGCTGCTGCAGACGCATCTCGGCCCCGACGACCTGATCGCGCGGCCGCGCACCATTTCGAGCCGTGCCGCC GAGAACCTGTTCTGGCTCGGCCGCTACACCGAGCGTGCGGCGAATCTCACGCGCCTCGCGCGCGCCGCGTTCGAGCGGCT GCGCGGCGAGGACGATCTCGACAGCCCCGCGCATCTCGAACTGCTCGACGCGCTGTGCCGCGAGCACGGCCTGATTCCGT CCGGGACGCGCTCGGCCGCCACCTCGCCGCGCGAGTTCCAGCAGACGCTGGCGCGTGCGCTGTCGCGGCGCGCCGACCCG GGCTCCGGCATCGCCGCCTGCGTGTTCGGCATGCGCGGGGCCGCCGCCGCGATCCGCGAGCGCCTTTCGCGCGACCAGTG GCGGCTGATCGACGACGCGACGCAATTGTTCGGCGAAGGCGCCGGCCCCGAGGAGGAGCCCGAGGAGCAGCTCGGCAACG CCGCGCTGCAGTTGCTCGACCGCCTGAACCTGCTGCTCTCGGCGATCACCGGTGCGCAGACCGACAACATGACGCGCGAC GACGGCTGGCGCCTGCTGTCGATCGGGCGCCAGATCGACCGGATCGATTTTTTGTCGGGCGTGCTGCGCTTTGCCTTCGA GGACGGCGCGGTGACCAAGCAGGACGGCTTCGAGCTCGTGCTGGAGCTGTTCGACAGCACCATCACGTTCCGCTCGCAGT TCCAGCGCTGCTTCGATGTCGCGCCGCTCATCTCGCTGGTGGTGCTCGACGGCGACAACCCGCGCTCGCTCGCCTGGGTC GTGCAGAAGATGCAGGGCCGGCTGACCAAGGTCGAGCACGGCGAGGGATACGCGCTGTCGGAACTGTCGCAGACGCTGCC GGTGCTCGGCCAATGGTCGCTGCACGCGCTTTGCGAAACCGACGGCGACGGCCGCCACGCGGCGCTGCTCGAGCATCTGC AGACGCTTGGCCGGGCCGCCTGGGATCTGTCGAATCGGATCGGCGAACGTTATTTCAGTCATGTGCGGGAAGCGGGCAGG TCGTTATGGGGATGA
Upstream 100 bases:
>100_bases GGCGGGAATGATAGGATGCGGGCTCGACGGGCGGCGCGCGTCGCGGCCCCGGAGGCCGCGGCCGCGCCGGCATGCCGCCC GAGACTGACGAAACGACATC
Downstream 100 bases:
>100_bases GCGCGAACGGCGCGGACGGGGCCCGGCAGGGCCAGCGCGAGGGTCCGGACGGCGCGGAGCAGCGGGAGCGCGGGGCGGGG GCGTCGCCGGCCGCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 884; Mature: 884
Protein sequence:
>884_residues MHPHITDDLAAAAMHTLFDTGSIQDAAELGAALAAPAVTGRYDELRGGAAALQTAALAPVWREFFTQLGSVGFADLDRRA EALERRMRENGLAYQLHDQHTAGAAARPWSLDLLPMIVAPADWAVIERGVLQRVRLANAILADIYGAQTILKAGLLPPAL VTGHPGYLRPMCGAAIPGGTWLHLAAFDLMRTPDGQWRLAAQHTQGPTGLGYLLENRLIVSRLFPRAFRGLRVQRLAASY RALLRSMQDLSPAGKNSRIVLLTPGRHAPTYFEHAYLARYLGLTLVEGGDLTARDNHVYLKTLSGLEPVHGILRRVDDEW LDPLELRPESMLGVPGLLQAVRAGNVLIANAPGSAFLESPGVLGFMPKLAERILGETLALPALPTWWCGEAAACAEALPQ LARAIIKPAYPPGAQAGGRFDPVIGARLTAQQLADWRARIAAHPAHYVIQSDLPPSQAPTWPSASGARSYQGGARIVPKP LLLRVFALADGAGSWRVLPGGLSRVGTRDELLNAPMPRGGSSVDTWVITEGAIDPTTLLQTHLGPDDLIARPRTISSRAA ENLFWLGRYTERAANLTRLARAAFERLRGEDDLDSPAHLELLDALCREHGLIPSGTRSAATSPREFQQTLARALSRRADP GSGIAACVFGMRGAAAAIRERLSRDQWRLIDDATQLFGEGAGPEEEPEEQLGNAALQLLDRLNLLLSAITGAQTDNMTRD DGWRLLSIGRQIDRIDFLSGVLRFAFEDGAVTKQDGFELVLELFDSTITFRSQFQRCFDVAPLISLVVLDGDNPRSLAWV VQKMQGRLTKVEHGEGYALSELSQTLPVLGQWSLHALCETDGDGRHAALLEHLQTLGRAAWDLSNRIGERYFSHVREAGR SLWG
Sequences:
>Translated_884_residues MHPHITDDLAAAAMHTLFDTGSIQDAAELGAALAAPAVTGRYDELRGGAAALQTAALAPVWREFFTQLGSVGFADLDRRA EALERRMRENGLAYQLHDQHTAGAAARPWSLDLLPMIVAPADWAVIERGVLQRVRLANAILADIYGAQTILKAGLLPPAL VTGHPGYLRPMCGAAIPGGTWLHLAAFDLMRTPDGQWRLAAQHTQGPTGLGYLLENRLIVSRLFPRAFRGLRVQRLAASY RALLRSMQDLSPAGKNSRIVLLTPGRHAPTYFEHAYLARYLGLTLVEGGDLTARDNHVYLKTLSGLEPVHGILRRVDDEW LDPLELRPESMLGVPGLLQAVRAGNVLIANAPGSAFLESPGVLGFMPKLAERILGETLALPALPTWWCGEAAACAEALPQ LARAIIKPAYPPGAQAGGRFDPVIGARLTAQQLADWRARIAAHPAHYVIQSDLPPSQAPTWPSASGARSYQGGARIVPKP LLLRVFALADGAGSWRVLPGGLSRVGTRDELLNAPMPRGGSSVDTWVITEGAIDPTTLLQTHLGPDDLIARPRTISSRAA ENLFWLGRYTERAANLTRLARAAFERLRGEDDLDSPAHLELLDALCREHGLIPSGTRSAATSPREFQQTLARALSRRADP GSGIAACVFGMRGAAAAIRERLSRDQWRLIDDATQLFGEGAGPEEEPEEQLGNAALQLLDRLNLLLSAITGAQTDNMTRD DGWRLLSIGRQIDRIDFLSGVLRFAFEDGAVTKQDGFELVLELFDSTITFRSQFQRCFDVAPLISLVVLDGDNPRSLAWV VQKMQGRLTKVEHGEGYALSELSQTLPVLGQWSLHALCETDGDGRHAALLEHLQTLGRAAWDLSNRIGERYFSHVREAGR SLWG >Mature_884_residues MHPHITDDLAAAAMHTLFDTGSIQDAAELGAALAAPAVTGRYDELRGGAAALQTAALAPVWREFFTQLGSVGFADLDRRA EALERRMRENGLAYQLHDQHTAGAAARPWSLDLLPMIVAPADWAVIERGVLQRVRLANAILADIYGAQTILKAGLLPPAL VTGHPGYLRPMCGAAIPGGTWLHLAAFDLMRTPDGQWRLAAQHTQGPTGLGYLLENRLIVSRLFPRAFRGLRVQRLAASY RALLRSMQDLSPAGKNSRIVLLTPGRHAPTYFEHAYLARYLGLTLVEGGDLTARDNHVYLKTLSGLEPVHGILRRVDDEW LDPLELRPESMLGVPGLLQAVRAGNVLIANAPGSAFLESPGVLGFMPKLAERILGETLALPALPTWWCGEAAACAEALPQ LARAIIKPAYPPGAQAGGRFDPVIGARLTAQQLADWRARIAAHPAHYVIQSDLPPSQAPTWPSASGARSYQGGARIVPKP LLLRVFALADGAGSWRVLPGGLSRVGTRDELLNAPMPRGGSSVDTWVITEGAIDPTTLLQTHLGPDDLIARPRTISSRAA ENLFWLGRYTERAANLTRLARAAFERLRGEDDLDSPAHLELLDALCREHGLIPSGTRSAATSPREFQQTLARALSRRADP GSGIAACVFGMRGAAAAIRERLSRDQWRLIDDATQLFGEGAGPEEEPEEQLGNAALQLLDRLNLLLSAITGAQTDNMTRD DGWRLLSIGRQIDRIDFLSGVLRFAFEDGAVTKQDGFELVLELFDSTITFRSQFQRCFDVAPLISLVVLDGDNPRSLAWV VQKMQGRLTKVEHGEGYALSELSQTLPVLGQWSLHALCETDGDGRHAALLEHLQTLGRAAWDLSNRIGERYFSHVREAGR SLWG
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 96025; Mature: 96025
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPHITDDLAAAAMHTLFDTGSIQDAAELGAALAAPAVTGRYDELRGGAAALQTAALAPV CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCHHHHCCCHHHHHHHHHHHH WREFFTQLGSVGFADLDRRAEALERRMRENGLAYQLHDQHTAGAAARPWSLDLLPMIVAP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHCC ADWAVIERGVLQRVRLANAILADIYGAQTILKAGLLPPALVTGHPGYLRPMCGAAIPGGT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCCCCCCCC WLHLAAFDLMRTPDGQWRLAAQHTQGPTGLGYLLENRLIVSRLFPRAFRGLRVQRLAASY HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALLRSMQDLSPAGKNSRIVLLTPGRHAPTYFEHAYLARYLGLTLVEGGDLTARDNHVYL HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCEEEE KTLSGLEPVHGILRRVDDEWLDPLELRPESMLGVPGLLQAVRAGNVLIANAPGSAFLESP EECCCCHHHHHHHHHHCHHHCCCHHCCCHHHCCCHHHHHHHHCCCEEEECCCCCHHHCCC GVLGFMPKLAERILGETLALPALPTWWCGEAAACAEALPQLARAIIKPAYPPGAQAGGRF CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DPVIGARLTAQQLADWRARIAAHPAHYVIQSDLPPSQAPTWPSASGARSYQGGARIVPKP CCHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LLLRVFALADGAGSWRVLPGGLSRVGTRDELLNAPMPRGGSSVDTWVITEGAIDPTTLLQ HHHHHHHHHCCCCCCEECCCCHHHCCCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHH THLGPDDLIARPRTISSRAAENLFWLGRYTERAANLTRLARAAFERLRGEDDLDSPAHLE HCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LLDALCREHGLIPSGTRSAATSPREFQQTLARALSRRADPGSGIAACVFGMRGAAAAIRE HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHH RLSRDQWRLIDDATQLFGEGAGPEEEPEEQLGNAALQLLDRLNLLLSAITGAQTDNMTRD HHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DGWRLLSIGRQIDRIDFLSGVLRFAFEDGAVTKQDGFELVLELFDSTITFRSQFQRCFDV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH APLISLVVLDGDNPRSLAWVVQKMQGRLTKVEHGEGYALSELSQTLPVLGQWSLHALCET HHHHEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCHHHEEECC DGDGRHAALLEHLQTLGRAAWDLSNRIGERYFSHVREAGRSLWG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHPHITDDLAAAAMHTLFDTGSIQDAAELGAALAAPAVTGRYDELRGGAAALQTAALAPV CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCHHHHCCCHHHHHHHHHHHH WREFFTQLGSVGFADLDRRAEALERRMRENGLAYQLHDQHTAGAAARPWSLDLLPMIVAP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHCC ADWAVIERGVLQRVRLANAILADIYGAQTILKAGLLPPALVTGHPGYLRPMCGAAIPGGT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCCCCCCCC WLHLAAFDLMRTPDGQWRLAAQHTQGPTGLGYLLENRLIVSRLFPRAFRGLRVQRLAASY HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALLRSMQDLSPAGKNSRIVLLTPGRHAPTYFEHAYLARYLGLTLVEGGDLTARDNHVYL HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCEEEE KTLSGLEPVHGILRRVDDEWLDPLELRPESMLGVPGLLQAVRAGNVLIANAPGSAFLESP EECCCCHHHHHHHHHHCHHHCCCHHCCCHHHCCCHHHHHHHHCCCEEEECCCCCHHHCCC GVLGFMPKLAERILGETLALPALPTWWCGEAAACAEALPQLARAIIKPAYPPGAQAGGRF CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DPVIGARLTAQQLADWRARIAAHPAHYVIQSDLPPSQAPTWPSASGARSYQGGARIVPKP CCHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LLLRVFALADGAGSWRVLPGGLSRVGTRDELLNAPMPRGGSSVDTWVITEGAIDPTTLLQ HHHHHHHHHCCCCCCEECCCCHHHCCCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHH THLGPDDLIARPRTISSRAAENLFWLGRYTERAANLTRLARAAFERLRGEDDLDSPAHLE HCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LLDALCREHGLIPSGTRSAATSPREFQQTLARALSRRADPGSGIAACVFGMRGAAAAIRE HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHH RLSRDQWRLIDDATQLFGEGAGPEEEPEEQLGNAALQLLDRLNLLLSAITGAQTDNMTRD HHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DGWRLLSIGRQIDRIDFLSGVLRFAFEDGAVTKQDGFELVLELFDSTITFRSQFQRCFDV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH APLISLVVLDGDNPRSLAWVVQKMQGRLTKVEHGEGYALSELSQTLPVLGQWSLHALCET HHHHEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCHHHEEECC DGDGRHAALLEHLQTLGRAAWDLSNRIGERYFSHVREAGRSLWG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]