| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024722
Identifier: 238024722
GI number: 238024722
Start: 1739621
End: 1740805
Strand: Reverse
Name: 238024722
Synonym: bglu_2g13590
Alternate gene names: NA
Gene position: 1740805-1739621 (Counterclockwise)
Preceding gene: 238024723
Following gene: 238024721
Centisome position: 61.57
GC content: 75.61
Gene sequence:
>1185_bases ATGGGGATGAGCGCGAACGGCGCGGACGGGGCCCGGCAGGGCCAGCGCGAGGGTCCGGACGGCGCGGAGCAGCGGGAGCG CGGGGCGGGGGCGTCGCCGGCCGCCGCGCGCCGGCCCGATGCGGTCGCGGGCGGCCCGGGGCGGCCGGCGGCCGGCGCCG CGGCAGCTTCGGCGGCAGCTTCGGCGGCAAGTTCGGCGGCGGGCGCGCCATCGGCCGCCTCGGCGGCGGAGCCGCGCACG CTGCGCGTCACTCACGACACGCACTATCGCTACGCGGCGCGCGTCGAATCGGCCCAGCATCAGGCGCGGCTCAGGCCGCT CGACCTGCCGCGCCAGCAGCTGCTCGATTTCGCGATCGAGATCGAGCCGCGTCCGGAGGGCGTGAGCGCCGAGATCGACG CGTTCGGCAACCAGCGCACCTCGTTCGCGCTGAACCAGCCGCACGAGGAGCTGTTCGTGCGCAGCCGCAGCCTGGTGCGC GTGAGCCCGCCGGCGCTGACGGCCGGCAAGCGCGGCGAGCCGCCGCCCGCCATCGCGAGCCCGGCACCCGGCACCGCGAG CGCCTGGGAGACGGTGCGCGAGACGCTGACGTTTCGCGCCGGACAAGCCTACGAAGCCGCCAGCGAGTTCGTGTTTCCGT CCACCCAGGTGGCCTGCCACGCCGATCTGGCCGCCTACGCGGCGCGCAGCTTCACGCCGGGGCGGCCGCTCGCGCAGGCC GCTTGGGACCTGATGCGGCGCATCCACGCCGAGTTCGCCTACCTGCCGAACAGCACCGACGTCGACACCACGGCGCTCGA CGCGCTCGCGCTGCGGCGCGGCGTCTGCCAGGACTTCGCGCACGTGATGATCGGCGCGATGCGCTCGCTCGGGCTCGCCG CGCGCTACGTCAGCGGCTATCTGCTGACCCAGCCGCCGCCGGGCCAGCCACGCCTGATCGGCGCCGACGCCTCGCATGCC TGGGTCGAGGTGTACGACCCGGCGTGGCCCGAGGACGGCGGCTGGCTGCAGCTCGATCCGACCAACGATCGCGCGCCCGG CAACGACTACGTGATGCTGTCGGTCGGCCGCGATTACGCCGACGTCACGCCCTTGCGCGGCGTGATCCGCGGCGGCGGCG CCGATCAGGTGCTGGCGGTGGGCGTCACGGTCGAGCCGCTCGACGAATCGCCCGCGGCCGGCTGA
Upstream 100 bases:
>100_bases TGCTCGAGCATCTGCAGACGCTTGGCCGGGCCGCCTGGGATCTGTCGAATCGGATCGGCGAACGTTATTTCAGTCATGTG CGGGAAGCGGGCAGGTCGTT
Downstream 100 bases:
>100_bases GCGCCGGCGTGGCCGTCTCTCGTTGGCACCGGCATGGCGAAGGCGCGACGCGTCGCGCGCGAGCCCACGGCGAAGGCACG GCTCGCCGTTCCGGCGCGCG
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MGMSANGADGARQGQREGPDGAEQRERGAGASPAAARRPDAVAGGPGRPAAGAAAASAAASAASSAAGAPSAASAAEPRT LRVTHDTHYRYAARVESAQHQARLRPLDLPRQQLLDFAIEIEPRPEGVSAEIDAFGNQRTSFALNQPHEELFVRSRSLVR VSPPALTAGKRGEPPPAIASPAPGTASAWETVRETLTFRAGQAYEAASEFVFPSTQVACHADLAAYAARSFTPGRPLAQA AWDLMRRIHAEFAYLPNSTDVDTTALDALALRRGVCQDFAHVMIGAMRSLGLAARYVSGYLLTQPPPGQPRLIGADASHA WVEVYDPAWPEDGGWLQLDPTNDRAPGNDYVMLSVGRDYADVTPLRGVIRGGGADQVLAVGVTVEPLDESPAAG
Sequences:
>Translated_394_residues MGMSANGADGARQGQREGPDGAEQRERGAGASPAAARRPDAVAGGPGRPAAGAAAASAAASAASSAAGAPSAASAAEPRT LRVTHDTHYRYAARVESAQHQARLRPLDLPRQQLLDFAIEIEPRPEGVSAEIDAFGNQRTSFALNQPHEELFVRSRSLVR VSPPALTAGKRGEPPPAIASPAPGTASAWETVRETLTFRAGQAYEAASEFVFPSTQVACHADLAAYAARSFTPGRPLAQA AWDLMRRIHAEFAYLPNSTDVDTTALDALALRRGVCQDFAHVMIGAMRSLGLAARYVSGYLLTQPPPGQPRLIGADASHA WVEVYDPAWPEDGGWLQLDPTNDRAPGNDYVMLSVGRDYADVTPLRGVIRGGGADQVLAVGVTVEPLDESPAAG >Mature_393_residues GMSANGADGARQGQREGPDGAEQRERGAGASPAAARRPDAVAGGPGRPAAGAAAASAAASAASSAAGAPSAASAAEPRTL RVTHDTHYRYAARVESAQHQARLRPLDLPRQQLLDFAIEIEPRPEGVSAEIDAFGNQRTSFALNQPHEELFVRSRSLVRV SPPALTAGKRGEPPPAIASPAPGTASAWETVRETLTFRAGQAYEAASEFVFPSTQVACHADLAAYAARSFTPGRPLAQAA WDLMRRIHAEFAYLPNSTDVDTTALDALALRRGVCQDFAHVMIGAMRSLGLAARYVSGYLLTQPPPGQPRLIGADASHAW VEVYDPAWPEDGGWLQLDPTNDRAPGNDYVMLSVGRDYADVTPLRGVIRGGGADQVLAVGVTVEPLDESPAAG
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 41280; Mature: 41149
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMSANGADGARQGQREGPDGAEQRERGAGASPAAARRPDAVAGGPGRPAAGAAAASAAA CCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SAASSAAGAPSAASAAEPRTLRVTHDTHYRYAARVESAQHQARLRPLDLPRQQLLDFAIE HHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEEE IEPRPEGVSAEIDAFGNQRTSFALNQPHEELFVRSRSLVRVSPPALTAGKRGEPPPAIAS ECCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC PAPGTASAWETVRETLTFRAGQAYEAASEFVFPSTQVACHADLAAYAARSFTPGRPLAQA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH AWDLMRRIHAEFAYLPNSTDVDTTALDALALRRGVCQDFAHVMIGAMRSLGLAARYVSGY HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LLTQPPPGQPRLIGADASHAWVEVYDPAWPEDGGWLQLDPTNDRAPGNDYVMLSVGRDYA EEECCCCCCCEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCH DVTPLRGVIRGGGADQVLAVGVTVEPLDESPAAG HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure GMSANGADGARQGQREGPDGAEQRERGAGASPAAARRPDAVAGGPGRPAAGAAAASAAA CCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SAASSAAGAPSAASAAEPRTLRVTHDTHYRYAARVESAQHQARLRPLDLPRQQLLDFAIE HHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEEE IEPRPEGVSAEIDAFGNQRTSFALNQPHEELFVRSRSLVRVSPPALTAGKRGEPPPAIAS ECCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC PAPGTASAWETVRETLTFRAGQAYEAASEFVFPSTQVACHADLAAYAARSFTPGRPLAQA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH AWDLMRRIHAEFAYLPNSTDVDTTALDALALRRGVCQDFAHVMIGAMRSLGLAARYVSGY HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LLTQPPPGQPRLIGADASHAWVEVYDPAWPEDGGWLQLDPTNDRAPGNDYVMLSVGRDYA EEECCCCCCCEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCH DVTPLRGVIRGGGADQVLAVGVTVEPLDESPAAG HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]