| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is livK [C]
Identifier: 238024704
GI number: 238024704
Start: 1721507
End: 1722661
Strand: Reverse
Name: livK [C]
Synonym: bglu_2g13410
Alternate gene names: 238024704
Gene position: 1722661-1721507 (Counterclockwise)
Preceding gene: 238024713
Following gene: 238024702
Centisome position: 60.93
GC content: 68.14
Gene sequence:
>1155_bases ATGAAGCAGACATCCATGGCCGGCGCGCGCGCCGCCATCTGGCTCGGCGTCGCCGCGCTGTTTTCGCTGACGGCCGCGAG CGGCGCGCTGGCGGACCAGGTCGTGAAGATCGGCAGCGTCGAACCGCTGACGGGCGGTGCCTCGCATCTGGGCAAGGACA ACGAGAACGGCGCGCGCCTCGCCGTCGAGGAGATCAACGCGCAGGGCCTGACGATCGGCGGCCGCAAGATCACGCTGCAG CTCGACGGCCAGGACGACGCGGGCGACCCGCGCACGGCCACGCAGGTCGCGCAGAAGCTCGTCGACGAGAAGGTCGCGGC GGTGGTCGGCCACCTGAATTCGGGCACCTCGATCCCGGCCTCGAAGATCTACAGCGATGCCGGCATCGTGCAGATCTCGC CGTCCGCGACCAACCCGGTCTACACCCGGCAGGGTTTCAAGACCACCTACCGGATGGTCGCGACCGACGCGCAGCAGGGC CCGGCACTCGCGAGCTACGCGCATGCCAAGTCGATCAGGACCGTCGCCGTGATCGACGACTCCACCGCCTACGGCCAGGG GCTCGCCAACGAGTTCGAGAAGAAGGCCAAGGCGCTCGGCATCAAGGTGCTCTCGCACGACGCGACCAACGACAAGGCGG TCGATTTCCGCGCGATCCTCACCCGGATCAAGGGCGAGAACCCGGACGCGATCATGTACGGCGGCATGGATGCCACGGGC GGCCCGCTCGCCAAGCAGGCGCGCCAGCTCGGCCTGCGCGCGAAGCTGTTCTCCGGCGACGGCGTCTGCACCGAGCAGCT GTCGGAGCTCGCCGGCCCGGCCGCCGACAACGTGATCTGCTCGCAGCCGGGCGCCGCGCTCGAGACGATGCCGGGCGGCG CGGCGTTCCAGGCCAAGTACCAGAAGCGCTTCGGCCAGATCATCAAGTTCGACGCGCCGTTTTCGTACGACGCGGTGTAC ATCATCGTCGACGCGATGAAGCGCGCGAACTCGACCGATCCGGCGAAGATCCTCGCGGCGATGCCGGCCACCGACCACCA GGGCGTGATCGGCCAGACCGTGTTCGACGCGAAGGGCGACCTGAAGCACGGCGTGATCTCGCTGTACGGCTACAAGGCCG GCAAGAAGACCTTCGTCGACCAGGTGAAGATGTAA
Upstream 100 bases:
>100_bases TTCAGTACACTGTCCGACCTCGCGGTCCGACCCCGCCGCGGTCCGACCCCGCCTTTGCCACCCCGCCTTTCCCACCATGC AACCGGAGGAACCCTTTCGC
Downstream 100 bases:
>100_bases TCGGCCCGCGGCCGTCTTCAGCGGGCGCGCCGGCGCGCGGCCACCAGCATCATCATCGGCCGCTCGCGTTCCTTCTCCAG TTCGGGCTGCGCCGCCACCT
Product: Extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKQTSMAGARAAIWLGVAALFSLTAASGALADQVVKIGSVEPLTGGASHLGKDNENGARLAVEEINAQGLTIGGRKITLQ LDGQDDAGDPRTATQVAQKLVDEKVAAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPVYTRQGFKTTYRMVATDAQQG PALASYAHAKSIRTVAVIDDSTAYGQGLANEFEKKAKALGIKVLSHDATNDKAVDFRAILTRIKGENPDAIMYGGMDATG GPLAKQARQLGLRAKLFSGDGVCTEQLSELAGPAADNVICSQPGAALETMPGGAAFQAKYQKRFGQIIKFDAPFSYDAVY IIVDAMKRANSTDPAKILAAMPATDHQGVIGQTVFDAKGDLKHGVISLYGYKAGKKTFVDQVKM
Sequences:
>Translated_384_residues MKQTSMAGARAAIWLGVAALFSLTAASGALADQVVKIGSVEPLTGGASHLGKDNENGARLAVEEINAQGLTIGGRKITLQ LDGQDDAGDPRTATQVAQKLVDEKVAAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPVYTRQGFKTTYRMVATDAQQG PALASYAHAKSIRTVAVIDDSTAYGQGLANEFEKKAKALGIKVLSHDATNDKAVDFRAILTRIKGENPDAIMYGGMDATG GPLAKQARQLGLRAKLFSGDGVCTEQLSELAGPAADNVICSQPGAALETMPGGAAFQAKYQKRFGQIIKFDAPFSYDAVY IIVDAMKRANSTDPAKILAAMPATDHQGVIGQTVFDAKGDLKHGVISLYGYKAGKKTFVDQVKM >Mature_384_residues MKQTSMAGARAAIWLGVAALFSLTAASGALADQVVKIGSVEPLTGGASHLGKDNENGARLAVEEINAQGLTIGGRKITLQ LDGQDDAGDPRTATQVAQKLVDEKVAAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPVYTRQGFKTTYRMVATDAQQG PALASYAHAKSIRTVAVIDDSTAYGQGLANEFEKKAKALGIKVLSHDATNDKAVDFRAILTRIKGENPDAIMYGGMDATG GPLAKQARQLGLRAKLFSGDGVCTEQLSELAGPAADNVICSQPGAALETMPGGAAFQAKYQKRFGQIIKFDAPFSYDAVY IIVDAMKRANSTDPAKILAAMPATDHQGVIGQTVFDAKGDLKHGVISLYGYKAGKKTFVDQVKM
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=362, Percent_Identity=32.5966850828729, Blast_Score=181, Evalue=7e-47, Organism=Escherichia coli, GI48994941, Length=362, Percent_Identity=31.767955801105, Blast_Score=165, Evalue=4e-42,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40146; Mature: 40146
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTSMAGARAAIWLGVAALFSLTAASGALADQVVKIGSVEPLTGGASHLGKDNENGARL CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEE AVEEINAQGLTIGGRKITLQLDGQDDAGDPRTATQVAQKLVDEKVAAVVGHLNSGTSIPA EEEECCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SKIYSDAGIVQISPSATNPVYTRQGFKTTYRMVATDAQQGPALASYAHAKSIRTVAVIDD HHHHCCCCEEEECCCCCCCCEECCCHHHHHHHEECCCCCCCCHHHHHHHHCCEEEEEEEC STAYGQGLANEFEKKAKALGIKVLSHDATNDKAVDFRAILTRIKGENPDAIMYGGMDATG CCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC GPLAKQARQLGLRAKLFSGDGVCTEQLSELAGPAADNVICSQPGAALETMPGGAAFQAKY CHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHH QKRFGQIIKFDAPFSYDAVYIIVDAMKRANSTDPAKILAAMPATDHQGVIGQTVFDAKGD HHHCCCEEEECCCCCCCEEEEEEEHHHHCCCCCHHHHEEECCCCCCCCCCCCEEECCCCC LKHGVISLYGYKAGKKTFVDQVKM CCCCEEEEEECCCCCHHHHHHHCC >Mature Secondary Structure MKQTSMAGARAAIWLGVAALFSLTAASGALADQVVKIGSVEPLTGGASHLGKDNENGARL CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEE AVEEINAQGLTIGGRKITLQLDGQDDAGDPRTATQVAQKLVDEKVAAVVGHLNSGTSIPA EEEECCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SKIYSDAGIVQISPSATNPVYTRQGFKTTYRMVATDAQQGPALASYAHAKSIRTVAVIDD HHHHCCCCEEEECCCCCCCCEECCCHHHHHHHEECCCCCCCCHHHHHHHHCCEEEEEEEC STAYGQGLANEFEKKAKALGIKVLSHDATNDKAVDFRAILTRIKGENPDAIMYGGMDATG CCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC GPLAKQARQLGLRAKLFSGDGVCTEQLSELAGPAADNVICSQPGAALETMPGGAAFQAKY CHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHH QKRFGQIIKFDAPFSYDAVYIIVDAMKRANSTDPAKILAAMPATDHQGVIGQTVFDAKGD HHHCCCEEEECCCCCCCEEEEEEEHHHHCCCCCHHHHEEECCCCCCCCCCCCEEECCCCC LKHGVISLYGYKAGKKTFVDQVKM CCCCEEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA