| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is paaE [H]
Identifier: 238024544
GI number: 238024544
Start: 1462453
End: 1463514
Strand: Reverse
Name: paaE [H]
Synonym: bglu_2g11500
Alternate gene names: 238024544
Gene position: 1463514-1462453 (Counterclockwise)
Preceding gene: 238024545
Following gene: 238024543
Centisome position: 51.76
GC content: 70.72
Gene sequence:
>1062_bases ATGTCGCAGTTCTTTCCGCTGACGATCTCGGCCGTGTATCCCGAGACGCGCGATGCCACCGTGCTGGAGTTCGCCGTGCC GGAAACCCTGGCCTCGCGCTTCTCGCACCGCCAGGGCCAGCACCTGACGCTGCGCGCGACGATCGGCGGCCAGGACGTGC GCCGCGCCTATTCGCTCTGCAATGCGGTGGGCGCGCCGCTGCGGGTGGCCATCAAGAAGGTGGAGGGCGGGGTGTTCTCG GGCTGGGCCCAGGCCAACCTGCGTGCCGGCCAGCAGATCGAGGTGATGCCGCCGTCGGGCAATTTCTACGTGCCGCTCGC GGCCGACCGTGCGTGCCATTACGCGGGCTTCGCAAGCGGCAGCGGCATCACGCCGATGCTGTCGATCCTCAAGACCACGC TGCAGGAGGAGCCGGCGAGCCGCTTCACGCTCGTCTACGGCAACCGCAACGTCGGCTCGACGATGTTCCGCGAGGAACTG GCGGACCTGAAGGACCGCCACGCGTCGCGGCTGTCGCTGATCTACGTGTTCAGCGGCGAGGCGCAGGAAGTCGAGCTGTG CAACGGGCGCCTCACCCACGAGCGCGTGCAGGGGCTGCTGCGCAGCTGGCTGCCGGCGGCCTCGATCGATTACGCGTTCG TCTGCGGCCCGGCCCAGATGATGGACGAGGTCTGCTGCGCGCTGGAGGACAGCGGCGTGCCGACGCCGCGCATCAAGCGC GAATACTTCCAGCCGGCCGGCGCGCCGGCCGCGGTCGTGCAGCGGCCGGCCGGCGCGGCCGAGGCCGGCAAGCGCATGAC GCTGATCGTGGACGGCGCCACGCGCCAGGTGGAATGGACCGGCTCGGCCGCCACGATCCTCGACGAGGCGCTCGCCGCCG GCATCGACCTGCGCTACTCGTGCAAGGGCGGGGTGTGCGCGACCTGCCGTTGTCGCGTGGTCGAGGGCGCGGTGGAGATG GACGCGCAATACGCGCTCGACGCCGACGAACTGGCCCAGGGCTACGTGCTCGGCTGCCGCGCGCGCCCGAGCACGCCGAA CCTCGTGCTCGAGTTCGACTGA
Upstream 100 bases:
>100_bases GGCGGCACGCTCTGCAAGTCGATGTATGTCTGTGACGATTGTTTGAATCCGTTCGAGCACTTCAAGTGCATCTGACGCGC AAGGCAAAAAGGAGCCATTC
Downstream 100 bases:
>100_bases GCTGGAACGAGCGGGCTGCGCCGTCTGCCCGCATTGCCGCGCGCCGCGTTGGCGCGCCTCCCGGACCCGAATCCCACTAC ACGGACAAGCATGCAAGCCA
Product: phenylacetate-CoA oxygenase/reductase subunit PaaK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSQFFPLTISAVYPETRDATVLEFAVPETLASRFSHRQGQHLTLRATIGGQDVRRAYSLCNAVGAPLRVAIKKVEGGVFS GWAQANLRAGQQIEVMPPSGNFYVPLAADRACHYAGFASGSGITPMLSILKTTLQEEPASRFTLVYGNRNVGSTMFREEL ADLKDRHASRLSLIYVFSGEAQEVELCNGRLTHERVQGLLRSWLPAASIDYAFVCGPAQMMDEVCCALEDSGVPTPRIKR EYFQPAGAPAAVVQRPAGAAEAGKRMTLIVDGATRQVEWTGSAATILDEALAAGIDLRYSCKGGVCATCRCRVVEGAVEM DAQYALDADELAQGYVLGCRARPSTPNLVLEFD
Sequences:
>Translated_353_residues MSQFFPLTISAVYPETRDATVLEFAVPETLASRFSHRQGQHLTLRATIGGQDVRRAYSLCNAVGAPLRVAIKKVEGGVFS GWAQANLRAGQQIEVMPPSGNFYVPLAADRACHYAGFASGSGITPMLSILKTTLQEEPASRFTLVYGNRNVGSTMFREEL ADLKDRHASRLSLIYVFSGEAQEVELCNGRLTHERVQGLLRSWLPAASIDYAFVCGPAQMMDEVCCALEDSGVPTPRIKR EYFQPAGAPAAVVQRPAGAAEAGKRMTLIVDGATRQVEWTGSAATILDEALAAGIDLRYSCKGGVCATCRCRVVEGAVEM DAQYALDADELAQGYVLGCRARPSTPNLVLEFD >Mature_352_residues SQFFPLTISAVYPETRDATVLEFAVPETLASRFSHRQGQHLTLRATIGGQDVRRAYSLCNAVGAPLRVAIKKVEGGVFSG WAQANLRAGQQIEVMPPSGNFYVPLAADRACHYAGFASGSGITPMLSILKTTLQEEPASRFTLVYGNRNVGSTMFREELA DLKDRHASRLSLIYVFSGEAQEVELCNGRLTHERVQGLLRSWLPAASIDYAFVCGPAQMMDEVCCALEDSGVPTPRIKRE YFQPAGAPAAVVQRPAGAAEAGKRMTLIVDGATRQVEWTGSAATILDEALAAGIDLRYSCKGGVCATCRCRVVEGAVEMD AQYALDADELAQGYVLGCRARPSTPNLVLEFD
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787658, Length=354, Percent_Identity=45.4802259887006, Blast_Score=318, Evalue=4e-88, Organism=Escherichia coli, GI1787098, Length=313, Percent_Identity=24.2811501597444, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788903, Length=217, Percent_Identity=26.7281105990783, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322146, Length=239, Percent_Identity=25.9414225941423, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38119; Mature: 37988
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFFPLTISAVYPETRDATVLEFAVPETLASRFSHRQGQHLTLRATIGGQDVRRAYSLC CCCEEEEEEEEECCCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH NAVGAPLRVAIKKVEGGVFSGWAQANLRAGQQIEVMPPSGNFYVPLAADRACHYAGFASG HHCCCCHHHHHHHHCCCEECCCHHHCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCC SGITPMLSILKTTLQEEPASRFTLVYGNRNVGSTMFREELADLKDRHASRLSLIYVFSGE CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCC AQEVELCNGRLTHERVQGLLRSWLPAASIDYAFVCGPAQMMDEVCCALEDSGVPTPRIKR CCEEHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHH EYFQPAGAPAAVVQRPAGAAEAGKRMTLIVDGATRQVEWTGSAATILDEALAAGIDLRYS HHCCCCCCCHHHHCCCCCCHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCEEEE CKGGVCATCRCRVVEGAVEMDAQYALDADELAQGYVLGCRARPSTPNLVLEFD CCCCEEEEEEEEEECCHHHCCHHHCCCHHHHCCCEEEEEECCCCCCCEEEEEC >Mature Secondary Structure SQFFPLTISAVYPETRDATVLEFAVPETLASRFSHRQGQHLTLRATIGGQDVRRAYSLC CCEEEEEEEEECCCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH NAVGAPLRVAIKKVEGGVFSGWAQANLRAGQQIEVMPPSGNFYVPLAADRACHYAGFASG HHCCCCHHHHHHHHCCCEECCCHHHCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCC SGITPMLSILKTTLQEEPASRFTLVYGNRNVGSTMFREELADLKDRHASRLSLIYVFSGE CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCC AQEVELCNGRLTHERVQGLLRSWLPAASIDYAFVCGPAQMMDEVCCALEDSGVPTPRIKR CCEEHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHH EYFQPAGAPAAVVQRPAGAAEAGKRMTLIVDGATRQVEWTGSAATILDEALAAGIDLRYS HHCCCCCCCHHHHCCCCCCHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCEEEE CKGGVCATCRCRVVEGAVEMDAQYALDADELAQGYVLGCRARPSTPNLVLEFD CCCCEEEEEEEEEECCHHHCCHHHCCCHHHHCCCEEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]