| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024537
Identifier: 238024537
GI number: 238024537
Start: 1454708
End: 1455142
Strand: Reverse
Name: 238024537
Synonym: bglu_2g11430
Alternate gene names: NA
Gene position: 1455142-1454708 (Counterclockwise)
Preceding gene: 238024538
Following gene: 238024536
Centisome position: 51.47
GC content: 65.75
Gene sequence:
>435_bases ATGAGCGCGGCAAGCTTCGAAAAAGACTATCTGATTCGTTTTTCCCACTGCGATCCGGCCGGCATCGTCTATTTCCCGCA GTACCTGGTGCTGACCAACTGGGCGCTCGAGGACTTCTTCAACGAAGGGCTGAAGGTGGACTTCGCGGGCCTGATCGAGC GGCGCCTGGGCATTCCGATCGTGAAGCTGCAGACCGAGTTCGTCCGGGCCTCGCGGCAGGGCGAGGTGCTGACGCTGCGC ATCGAGGTGACGCGGCTCGGCGAGCGCTCGCTCACGGCCACCTTCACGGGCCGCGTCGGCGACGAGGTGCGCCTGCGCAG CGAGCAGGTGTTCGTGATGATCTCGCTCGACAAGGTGGCCTCGATGCCGTTTCCGGACGACATCCGCGCGGCGCTGCGGC GCTACCTGCCGGCGGCCGAGGAGGTGACGGCATGA
Upstream 100 bases:
>100_bases TGGCTTCAGCATGCTGGCCAACTACCTGCGCGTCGTCGAGCAGCATGCCGCGAGTGCGGCTGCCGCCGTCGCCTGACCCG TACCACGCAAGGACTTCGCA
Downstream 100 bases:
>100_bases TCCAGCTCTTGCAACCGCCGCAGTGGGTGCGCCCGCGCGGCTACGCGAACGGCGTGGCCGCGAAGGGGCGCCTGGTGTTC ACCTCGGGCCAGCTCGGCTG
Product: Thioesterase superfamily protein
Products: 4-hydroxybenzoate; CoA
Alternate protein names: 4-Hydroxybenzoyl CoA Thioesterase; Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Protein; Thioesterase Superfamily; Thioesterase Family Protein; 4-Hydroxybenzoyl-CoA Thioesterase; 4-Hydroxybenzoyl-COA Thioesterase Protein; 4-Hydroxybenzoyl-CoA Thioesterase Family Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSAASFEKDYLIRFSHCDPAGIVYFPQYLVLTNWALEDFFNEGLKVDFAGLIERRLGIPIVKLQTEFVRASRQGEVLTLR IEVTRLGERSLTATFTGRVGDEVRLRSEQVFVMISLDKVASMPFPDDIRAALRRYLPAAEEVTA
Sequences:
>Translated_144_residues MSAASFEKDYLIRFSHCDPAGIVYFPQYLVLTNWALEDFFNEGLKVDFAGLIERRLGIPIVKLQTEFVRASRQGEVLTLR IEVTRLGERSLTATFTGRVGDEVRLRSEQVFVMISLDKVASMPFPDDIRAALRRYLPAAEEVTA >Mature_143_residues SAASFEKDYLIRFSHCDPAGIVYFPQYLVLTNWALEDFFNEGLKVDFAGLIERRLGIPIVKLQTEFVRASRQGEVLTLRI EVTRLGERSLTATFTGRVGDEVRLRSEQVFVMISLDKVASMPFPDDIRAALRRYLPAAEEVTA
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.2.23
Molecular weight: Translated: 16346; Mature: 16215
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASFEKDYLIRFSHCDPAGIVYFPQYLVLTNWALEDFFNEGLKVDFAGLIERRLGIPI CCCCCCCCCEEEEECCCCCCCEEECCCEEEHHHHHHHHHHCCCCEEEHHHHHHHHHCCCE VKLQTEFVRASRQGEVLTLRIEVTRLGERSLTATFTGRVGDEVRLRSEQVFVMISLDKVA EEEHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCEEECCCEEEEEEEEHHHH SMPFPDDIRAALRRYLPAAEEVTA CCCCCHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure SAASFEKDYLIRFSHCDPAGIVYFPQYLVLTNWALEDFFNEGLKVDFAGLIERRLGIPI CCCCCCCCEEEEECCCCCCCEEECCCEEEHHHHHHHHHHCCCCEEEHHHHHHHHHCCCE VKLQTEFVRASRQGEVLTLRIEVTRLGERSLTATFTGRVGDEVRLRSEQVFVMISLDKVA EEEHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCEEECCCEEEEEEEEHHHH SMPFPDDIRAALRRYLPAAEEVTA CCCCCHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxybenzoyl-CoA; H2O
Specific reaction: 4-hydroxybenzoyl-CoA + H2O = 4-hydroxybenzoate + CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA