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The map label for this gene is tdcF [C]

Identifier: 238024536

GI number: 238024536

Start: 1454319

End: 1454711

Strand: Reverse

Name: tdcF [C]

Synonym: bglu_2g11420

Alternate gene names: 238024536

Gene position: 1454711-1454319 (Counterclockwise)

Preceding gene: 238024537

Following gene: 238024535

Centisome position: 51.45

GC content: 69.47

Gene sequence:

>393_bases
ATGATCCAGCTCTTGCAACCGCCGCAGTGGGTGCGCCCGCGCGGCTACGCGAACGGCGTGGCCGCGAAGGGGCGCCTGGT
GTTCACCTCGGGCCAGCTCGGCTGGGACGCGCAGGAGAAGCTGGCCGGCGAGCGTTACGCCGACCAGGCGATCCAGGCGC
TGAAGAACATCGTGGCGGTGCTGGCCGAGGCCGGCGCGAAGCCCGAGCATCTGGTGCGTCTGACCTGGTACGTAGCGGAC
CGCGAGGCCTATTTCGCCGAAGCGAAGGAGGTGGGCCGCGCGTACCGCGAGCTGATCGGGCATTTCCCGCCGATGAGCGC
GTTCCAGGTGGCCGCGCTGATGGTGGAGGGCGCCAAGGTGCAGATCGAGGCCACCGCGGTGATTCCCGACTGA

Upstream 100 bases:

>100_bases
TCGTGATGATCTCGCTCGACAAGGTGGCCTCGATGCCGTTTCCGGACGACATCCGCGCGGCGCTGCGGCGCTACCTGCCG
GCGGCCGAGGAGGTGACGGC

Downstream 100 bases:

>100_bases
CGCGGCGCGCGCGGCCGAGATCGCGGCCGGCGCGGCCTTGCCCGCGTTATGACCACGGCTGATATCCGTATCGCTTTTGC
TTCGTTGTCATGCGCCGGGC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translation Initiation Inhibitor; Pyrimidine Utilization Protein C; Aerobic 2-Aminobenzoate Metabolism Related Protein; Translational Inhibitor; Endoribonuclease Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MIQLLQPPQWVRPRGYANGVAAKGRLVFTSGQLGWDAQEKLAGERYADQAIQALKNIVAVLAEAGAKPEHLVRLTWYVAD
REAYFAEAKEVGRAYRELIGHFPPMSAFQVAALMVEGAKVQIEATAVIPD

Sequences:

>Translated_130_residues
MIQLLQPPQWVRPRGYANGVAAKGRLVFTSGQLGWDAQEKLAGERYADQAIQALKNIVAVLAEAGAKPEHLVRLTWYVAD
REAYFAEAKEVGRAYRELIGHFPPMSAFQVAALMVEGAKVQIEATAVIPD
>Mature_130_residues
MIQLLQPPQWVRPRGYANGVAAKGRLVFTSGQLGWDAQEKLAGERYADQAIQALKNIVAVLAEAGAKPEHLVRLTWYVAD
REAYFAEAKEVGRAYRELIGHFPPMSAFQVAALMVEGAKVQIEATAVIPD

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14277; Mature: 14277

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLLQPPQWVRPRGYANGVAAKGRLVFTSGQLGWDAQEKLAGERYADQAIQALKNIVAV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAEAGAKPEHLVRLTWYVADREAYFAEAKEVGRAYRELIGHFPPMSAFQVAALMVEGAKV
HHHCCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEE
QIEATAVIPD
EEEEEEECCC
>Mature Secondary Structure
MIQLLQPPQWVRPRGYANGVAAKGRLVFTSGQLGWDAQEKLAGERYADQAIQALKNIVAV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAEAGAKPEHLVRLTWYVADREAYFAEAKEVGRAYRELIGHFPPMSAFQVAALMVEGAKV
HHHCCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEE
QIEATAVIPD
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA