| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024520
Identifier: 238024520
GI number: 238024520
Start: 1437584
End: 1438882
Strand: Reverse
Name: 238024520
Synonym: bglu_2g11260
Alternate gene names: NA
Gene position: 1438882-1437584 (Counterclockwise)
Preceding gene: 238024521
Following gene: 238024519
Centisome position: 50.89
GC content: 73.36
Gene sequence:
>1299_bases ATGGAAATGTCTCGCCCGAGGCCGGGCGCCGTCGCCGTCGTGCTCTGGGCGGTGCTGTATCTGGTGAGCGGTCAGCTGTC GCGTCAACTGAACGGGCCGGTCGGTCTGCCCGGCTATATCTGGCTGCCGGCCGGCGTCACGGTGGGCGCCTTCATGCTGC GCCCGCCCGGTGAATGGCCGGTGCTGGCCGCCGCGTTTCTGGTCGCCCAGCTCGCGCTGGCCGCGGTCGAGCACGGCAGC TACCCCGACACGCTGGTCTACGCGCTGATCGCGATCGGCTCGGCCGCGCTCGCGGTCTGGCTGGTGCGGCGCGTGCGGCT CTCGCTGGAGGGCCTGTATTTCCTGCGCTCGATGATCTCGGCCGCGCTGCTCACCAGCCTGTTCGGCGCGCTGGCGAGCG GGGCCTGGCGCGCGTTCATGCAGGGCTCGGCGTTGCCCGACGTCGCGTTCGTCTGGGCGGCCTCGGACTTCGTCGGCATC CTGCTGGTCGCGCCCGTGCTGGCGTCGTGGTCACGCTTTCGCGCGCACCGCTCGGGTGACCACGAGCGCTTCGACATCGG GCTCGGCATCGTATCGTTCGCGCTGCTGGCGGCCAGCGCCTGGGCGATCTTCGACAGCGCCGGCGCCGGCACGCCCGCCG GCGCGATCGGCTTCGCCGCAACCTACATTCCGCTGTTCCTGACGGTGGCGGTGACGGTGCTGCTGGGCGGCCGAGCCGGC TCGCTGTCGGTGCTGGTGCTCGCCGTGATCGTGATCCTGCAGACCGCGGACGGGGACGGGCCGTTCTCGCTGCTGGAAAC CTCGCGCGGGCGCTCGCTGCTGGAGGCGCAGCTCTATCTGGCGGTGGCCTCGCTGCTGGTGCTGACGGTCAGCACGCTGA AAACCGGCAACGAACGCGCCAGCGCGCGCGCCGACACGCTCGCCAGCAACATCGCGCTGGCGCTCGCGAGCGCGGACCAG GTGGCCTACGTGCTCGATCCGGCCACCGATACGCTCGAATGGAGCGGCGACCTGCAGCGCGCGTTCGGGCCGGGCGCCGA GGCCGCGCAACTCGCCAGCGTGGCGCGCGTGCTCGAACGGCTGGCGCCGCCCGATCGCGACACGCTGCGCCGCCACTGGC GCGCCGGCGCGGCCGGCCAGCCGGGCGAGCCGGTGAGCTTCGGCATCGTGCAGCCGGACGGCGCGATCCTGCGCGTGACC GACCGCGGCGCGCCGCTCAGCTACGCGAACCTGGACGTGACGGTGGTGGCGGGCGTCTGGCAGATCGCGCGCGGGCCGGC CGGCGCGGCCGGCGCCTGA
Upstream 100 bases:
>100_bases AAATTCGCGAAACATGCCGCCCGTGGCTGATAAATTGCGCTCCTGGCCCCGGAAACGCGCGAGAATTCGCCTCTCGTGTC TAGCAGGTGCGGAGGAATCC
Downstream 100 bases:
>100_bases GCGGACGGTCCGCATCATGTCCGGTCGCACCGGCGTCCTGCTGATCCACGGGCTGGGCGGCACCGAGTACGATCTCGGCT CGCTGCACAAGGCAATCCGT
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: Integral Membrane Sensor Protein; PAS Fold Family Protein; PAS/PAC Sensor Protein
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWPVLAAAFLVAQLALAAVEHGS YPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMISAALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGI LLVAPVLASWSRFRAHRSGDHERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERASARADTLASNIALALASADQ VAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLERLAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVT DRGAPLSYANLDVTVVAGVWQIARGPAGAAGA
Sequences:
>Translated_432_residues MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWPVLAAAFLVAQLALAAVEHGS YPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMISAALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGI LLVAPVLASWSRFRAHRSGDHERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERASARADTLASNIALALASADQ VAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLERLAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVT DRGAPLSYANLDVTVVAGVWQIARGPAGAAGA >Mature_432_residues MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWPVLAAAFLVAQLALAAVEHGS YPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMISAALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGI LLVAPVLASWSRFRAHRSGDHERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERASARADTLASNIALALASADQ VAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLERLAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVT DRGAPLSYANLDVTVVAGVWQIARGPAGAAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44910; Mature: 44910
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHEEECCCCCCH VLAAAFLVAQLALAAVEHGSYPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMIS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGILLVAPVLASWSRFRAHRSGD HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERA HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SARADTLASNIALALASADQVAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLER HHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH LAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVTDRGAPLSYANLDVTVVAGVW HCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEECCCCEEEHHHHH QIARGPAGAAGA HHHCCCCCCCCC >Mature Secondary Structure MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHEEECCCCCCH VLAAAFLVAQLALAAVEHGSYPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMIS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGILLVAPVLASWSRFRAHRSGD HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERA HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SARADTLASNIALALASADQVAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLER HHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH LAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVTDRGAPLSYANLDVTVVAGVW HCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEECCCCEEEHHHHH QIARGPAGAAGA HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA