| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024512
Identifier: 238024512
GI number: 238024512
Start: 1427618
End: 1428637
Strand: Direct
Name: 238024512
Synonym: bglu_2g11150
Alternate gene names: NA
Gene position: 1427618-1428637 (Clockwise)
Preceding gene: 238024511
Following gene: 238024513
Centisome position: 50.49
GC content: 71.27
Gene sequence:
>1020_bases ATGTCCGTTACCGTCAAGCCTGACGCGCCCGGCCCGGCGGCCCCGCCCGCCGGCCCCGGCCCGGTCCACGCCGGGCCGGG GCCGGGGCCGGCGCGCGCGCCGCGCCTGGGCCTGCCGAATCTCGGCTTCGGCGTGGGGCTGCGCCCGCAGCACCTGCCGG CCATCCTCGCCGGCGGCGCGCGCGTCGACTGGTTCGAAATCGTTTCGGAAAACTACTTCGAGGACGCCGGCTACCAGCGC GCGATGCTCGATAAGCTGGCCGCCGACGTGCCGATCGTGATGCACGGCGTATCGCTGTCGATCGGCTCCGACTCGCCGCT CGATCTCGACTATCTGCGCAAGCTGCGGCAGTTGATGGACGAGGTAGGCGCCGTCTGGGTATCCGATCACCTGTGCTGGA CCGGGCTCGGGTCGCACCATTCGCACGACCTGCTGCCGCTGCCGTTCCACGCGGCCTCGCTCGAGCACGTCGCCGCGCGC GTGGACGCGGTTCAGCAGTTTCTCGGCCGGCCGCTGGTGCTCGAGAATCCGTCGAGCTACATCCAGTTCCGCAGCTCGAC CATGAGCGAATGCGAATTCCTCGCGCGGCTCGCCGAGCGCACCGGCTGCGGCCTGCTGCTCGACGTCAACAACGTCTACG TCAGCGCATTCAACCATCGCTTCGACGCGCAGGCCTACCTGCGCGCGCTGCCGCACGACCAGGTGGTGCAGATCCATCTG GCCGGCCACACGGCATGGGGCGACACGCTGATCGACACTCACGACCAGCCGGTGCCGCCCGGCGTGTGGGCGCTCTACGC GCTCGCGCAGCAGCTCACGGGCGGCGTGGCCACGCTGCTCGAATGGGATGCGAACCTGCCCGGCTACGACGGGCTGCTCG CCGAACTCGACAAGGCGCGCCGCGTGACGCGCGGCGAAGCGCTGCCGGCGGCCGAGGGCGGCAGCGCGGCCGGCGCCGCC GTGGCGATGGCTGCCTCCACGCCGCTGCATTTGCCCCTGCCGGAGAGCATCGATGGATGA
Upstream 100 bases:
>100_bases TGCGGGCTCATCAGGACCCGAGCTACAAGCCGCAGGACACGCCGCCGCCTGCCACGGATCTGCGCATCGCCCTGCCGCCG TCGACCTGATCCAGGCCCGC
Downstream 100 bases:
>100_bases CGCCATGCACCGCGGTGAAGGCTCGCTGGCGGCCGTGCAGGGTTGGATGCAGGCCGCCACCACGCACCCGGCCGGGCTCG GCCCCGGGCTCGCGCTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSVTVKPDAPGPAAPPAGPGPVHAGPGPGPARAPRLGLPNLGFGVGLRPQHLPAILAGGARVDWFEIVSENYFEDAGYQR AMLDKLAADVPIVMHGVSLSIGSDSPLDLDYLRKLRQLMDEVGAVWVSDHLCWTGLGSHHSHDLLPLPFHAASLEHVAAR VDAVQQFLGRPLVLENPSSYIQFRSSTMSECEFLARLAERTGCGLLLDVNNVYVSAFNHRFDAQAYLRALPHDQVVQIHL AGHTAWGDTLIDTHDQPVPPGVWALYALAQQLTGGVATLLEWDANLPGYDGLLAELDKARRVTRGEALPAAEGGSAAGAA VAMAASTPLHLPLPESIDG
Sequences:
>Translated_339_residues MSVTVKPDAPGPAAPPAGPGPVHAGPGPGPARAPRLGLPNLGFGVGLRPQHLPAILAGGARVDWFEIVSENYFEDAGYQR AMLDKLAADVPIVMHGVSLSIGSDSPLDLDYLRKLRQLMDEVGAVWVSDHLCWTGLGSHHSHDLLPLPFHAASLEHVAAR VDAVQQFLGRPLVLENPSSYIQFRSSTMSECEFLARLAERTGCGLLLDVNNVYVSAFNHRFDAQAYLRALPHDQVVQIHL AGHTAWGDTLIDTHDQPVPPGVWALYALAQQLTGGVATLLEWDANLPGYDGLLAELDKARRVTRGEALPAAEGGSAAGAA VAMAASTPLHLPLPESIDG >Mature_338_residues SVTVKPDAPGPAAPPAGPGPVHAGPGPGPARAPRLGLPNLGFGVGLRPQHLPAILAGGARVDWFEIVSENYFEDAGYQRA MLDKLAADVPIVMHGVSLSIGSDSPLDLDYLRKLRQLMDEVGAVWVSDHLCWTGLGSHHSHDLLPLPFHAASLEHVAARV DAVQQFLGRPLVLENPSSYIQFRSSTMSECEFLARLAERTGCGLLLDVNNVYVSAFNHRFDAQAYLRALPHDQVVQIHLA GHTAWGDTLIDTHDQPVPPGVWALYALAQQLTGGVATLLEWDANLPGYDGLLAELDKARRVTRGEALPAAEGGSAAGAAV AMAASTPLHLPLPESIDG
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 36002; Mature: 35871
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTVKPDAPGPAAPPAGPGPVHAGPGPGPARAPRLGLPNLGFGVGLRPQHLPAILAGGA CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCC RVDWFEIVSENYFEDAGYQRAMLDKLAADVPIVMHGVSLSIGSDSPLDLDYLRKLRQLMD CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECEEEEECCCCCCCHHHHHHHHHHHH EVGAVWVSDHLCWTGLGSHHSHDLLPLPFHAASLEHVAARVDAVQQFLGRPLVLENPSSY HHCCEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH IQFRSSTMSECEFLARLAERTGCGLLLDVNNVYVSAFNHRFDAQAYLRALPHDQVVQIHL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHCCCCCEEEEEE AGHTAWGDTLIDTHDQPVPPGVWALYALAQQLTGGVATLLEWDANLPGYDGLLAELDKAR ECCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHH RVTRGEALPAAEGGSAAGAAVAMAASTPLHLPLPESIDG HHHCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SVTVKPDAPGPAAPPAGPGPVHAGPGPGPARAPRLGLPNLGFGVGLRPQHLPAILAGGA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCC RVDWFEIVSENYFEDAGYQRAMLDKLAADVPIVMHGVSLSIGSDSPLDLDYLRKLRQLMD CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECEEEEECCCCCCCHHHHHHHHHHHH EVGAVWVSDHLCWTGLGSHHSHDLLPLPFHAASLEHVAARVDAVQQFLGRPLVLENPSSY HHCCEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH IQFRSSTMSECEFLARLAERTGCGLLLDVNNVYVSAFNHRFDAQAYLRALPHDQVVQIHL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHCCCCCEEEEEE AGHTAWGDTLIDTHDQPVPPGVWALYALAQQLTGGVATLLEWDANLPGYDGLLAELDKAR ECCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHH RVTRGEALPAAEGGSAAGAAVAMAASTPLHLPLPESIDG HHHCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA